RNA–Protein interactions for RNA: ENST00000561081.5

LRRC49-227, Transcript of leucine rich repeat containing 49, humanhuman

TSL 2

Gene LRRC49, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-227ENST00000561081 HAND2P61296 217 aa12.54□□□□□ -0.4
LRRC49-227ENST00000561081 CHST3Q7LGC8 479 aa12.54□□□□□ -0.4
LRRC49-227ENST00000561081 SPATA5Q8NB90 893 aa12.54□□□□□ -0.4
LRRC49-227ENST00000561081 ZNF274Q96GC6 653 aaPredicted RBP12.54□□□□□ -0.4
LRRC49-227ENST00000561081 CNTNAP4Q9C0A0 1308 aa12.54□□□□□ -0.4
LRRC49-227ENST00000561081 ZNF532Q9HCE3 1301 aa12.54□□□□□ -0.4
LRRC49-227ENST00000561081 TCRBV5S4A2TA0A5A2 114 aa12.54□□□□□ -0.4
LRRC49-227ENST00000561081 SNAP23O00161 211 aa12.54□□□□□ -0.4
LRRC49-227ENST00000561081 PDE6AP16499 860 aa12.54□□□□□ -0.4
LRRC49-227ENST00000561081 NSUN7Q8NE18 718 aaKnown RBP12.54□□□□□ -0.4
LRRC49-227ENST00000561081 CTDNEP1O95476 244 aa12.53□□□□□ -0.4
LRRC49-227ENST00000561081 EVCP57679 992 aa12.53□□□□□ -0.4
LRRC49-227ENST00000561081 KRT85P78386 507 aa12.53□□□□□ -0.4
LRRC49-227ENST00000561081 CCDC173Q0VFZ6 552 aa12.53□□□□□ -0.4
LRRC49-227ENST00000561081 CCDC183Q5T5S1 534 aa12.53□□□□□ -0.4
LRRC49-227ENST00000561081 PTF1AQ7RTS3 328 aa12.53□□□□□ -0.4
LRRC49-227ENST00000561081 PPP1R9BQ96SB3 815 aa12.53□□□□□ -0.4
LRRC49-227ENST00000561081 WWC3Q9ULE0 1092 aa12.53□□□□□ -0.4
LRRC49-227ENST00000561081 DOCK2Q92608 1830 aa12.53□□□□□ -0.4
LRRC49-227ENST00000561081 COL4A1P02462 1669 aa12.53□□□□□ -0.4
LRRC49-227ENST00000561081 PDIA3P30101 505 aaKnown RBP12.53□□□□□ -0.4
LRRC49-227ENST00000561081 KCNQ4P56696 695 aa12.53□□□□□ -0.4
LRRC49-227ENST00000561081 RASGRF1Q13972 1273 aa12.53□□□□□ -0.4
LRRC49-227ENST00000561081 MB21D2Q8IYB1 491 aaPredicted RBP12.53□□□□□ -0.4
LRRC49-227ENST00000561081 DDX11Q96FC9 970 aa12.53□□□□□ -0.4
LRRC49-227ENST00000561081 SCN7AQ01118 1682 aa12.53□□□□□ -0.4
LRRC49-227ENST00000561081 ZNF213O14771 459 aa12.53□□□□□ -0.4
LRRC49-227ENST00000561081 ERFEQ4G0M1 354 aa12.53□□□□□ -0.4
LRRC49-227ENST00000561081 RGL2O15211 777 aa12.52□□□□□ -0.4
LRRC49-227ENST00000561081 FAM173BQ6P4H8 233 aa12.52□□□□□ -0.4
LRRC49-227ENST00000561081 ANP32BQ92688 251 aaKnown RBP12.52□□□□□ -0.4
LRRC49-227ENST00000561081 TSPY26PQ9H489 355 aa12.52□□□□□ -0.4
LRRC49-227ENST00000561081 THSD7AQ9UPZ6 1657 aa12.52□□□□□ -0.41
LRRC49-227ENST00000561081 ELP1O95163 1332 aa12.52□□□□□ -0.41
LRRC49-227ENST00000561081 MCM5P33992 734 aa12.52□□□□□ -0.41
LRRC49-227ENST00000561081 CCT2P78371 535 aaKnown RBP12.52□□□□□ -0.41
LRRC49-227ENST00000561081 CHRNDQ07001 517 aa12.52□□□□□ -0.41
LRRC49-227ENST00000561081 TTC6Q86TZ1 520 aa12.52□□□□□ -0.41
LRRC49-227ENST00000561081 FAM184AQ8NB25 1140 aa12.52□□□□□ -0.41
LRRC49-227ENST00000561081 SALL1Q9NSC2 1324 aa12.52□□□□□ -0.41
LRRC49-227ENST00000561081 CASZ1Q86V15 1759 aa12.52□□□□□ -0.41
LRRC49-227ENST00000561081 BTAF1O14981 1849 aa12.51□□□□□ -0.41
LRRC49-227ENST00000561081 PTPDC1A2A3K4 754 aa12.51□□□□□ -0.41
LRRC49-227ENST00000561081 HMGN5P82970 282 aaKnown RBP12.51□□□□□ -0.41
LRRC49-227ENST00000561081 RESTQ13127 1097 aa12.51□□□□□ -0.41
LRRC49-227ENST00000561081 NCOA7Q8NI08 942 aa12.51□□□□□ -0.41
LRRC49-227ENST00000561081 CDC5LQ99459 802 aaKnown RBP12.51□□□□□ -0.41
LRRC49-227ENST00000561081 NBPF3Q9H094 633 aa12.51□□□□□ -0.41
LRRC49-227ENST00000561081 NCOA5Q9HCD5 579 aaKnown RBP12.51□□□□□ -0.41
LRRC49-227ENST00000561081 PRC1O43663 620 aa12.51□□□□□ -0.41
LRRC49-227ENST00000561081 LETM1O95202 739 aaPredicted RBP12.51□□□□□ -0.41
LRRC49-227ENST00000561081 BCAMP50895 628 aa12.51□□□□□ -0.41
LRRC49-227ENST00000561081 SF3B3Q15393 1217 aaKnown RBP12.51□□□□□ -0.41
LRRC49-227ENST00000561081 RC3H1Q5TC82 1133 aaKnown RBP12.51□□□□□ -0.41
LRRC49-227ENST00000561081 C3orf67Q6ZVT6 689 aa12.51□□□□□ -0.41
LRRC49-227ENST00000561081 STRBPQ96SI9 672 aaKnown RBP12.51□□□□□ -0.41
LRRC49-227ENST00000561081 GPHNQ9NQX3 736 aaPredicted RBP12.51□□□□□ -0.41
LRRC49-227ENST00000561081 WDR19Q8NEZ3 1342 aa12.51□□□□□ -0.41
LRRC49-227ENST00000561081 NHSQ6T4R5 1651 aa12.51□□□□□ -0.41
LRRC49-227ENST00000561081 H3BQV1 296 aa12.51□□□□□ -0.41
LRRC49-227ENST00000561081 ANTXR2P58335 489 aa12.51□□□□□ -0.41
LRRC49-227ENST00000561081 TPRNQ4KMQ1 711 aa12.51□□□□□ -0.41
LRRC49-227ENST00000561081 IFFO2Q5TF58 517 aa12.51□□□□□ -0.41
LRRC49-227ENST00000561081 CHMP4CQ96CF2 233 aa12.51□□□□□ -0.41
LRRC49-227ENST00000561081 SCAND2PQ9GZW5 306 aaPredicted RBP12.51□□□□□ -0.41
LRRC49-227ENST00000561081 RRAGDQ9NQL2 400 aaPredicted RBP12.51□□□□□ -0.41
LRRC49-227ENST00000561081 USP21Q9UK80 565 aa12.51□□□□□ -0.41
LRRC49-227ENST00000561081 MAP3K12Q12852 859 aa12.5□□□□□ -0.41
LRRC49-227ENST00000561081 BCL2L12Q9HB09 334 aa12.5□□□□□ -0.41
LRRC49-227ENST00000561081 NAP1L2Q9ULW6 460 aaPredicted RBP12.5□□□□□ -0.41
LRRC49-227ENST00000561081 A0A1B0GUL6 1792 aa12.5□□□□□ -0.41
LRRC49-227ENST00000561081 TBC1D9BQ66K14 1250 aa12.5□□□□□ -0.41
LRRC49-227ENST00000561081 NAA16Q6N069 864 aaPredicted RBP12.5□□□□□ -0.41
LRRC49-227ENST00000561081 RALYLQ86SE5 291 aaKnown RBP12.5□□□□□ -0.41
LRRC49-227ENST00000561081 MAGEB6Q8N7X4 407 aa12.5□□□□□ -0.41
LRRC49-227ENST00000561081 AIDAQ96BJ3 306 aa12.5□□□□□ -0.41
LRRC49-227ENST00000561081 ZSCAN16Q9H4T2 348 aaPredicted RBP12.5□□□□□ -0.41
LRRC49-227ENST00000561081 APPP05067 770 aa12.49□□□□□ -0.41
LRRC49-227ENST00000561081 SMIM5Q71RC9 77 aa12.49□□□□□ -0.41
LRRC49-227ENST00000561081 KIF3AQ9Y496 699 aa12.49□□□□□ -0.41
LRRC49-227ENST00000561081 SPATA31A6Q5VVP1 1343 aa12.49□□□□□ -0.41
LRRC49-227ENST00000561081 ALX1Q15699 326 aa12.49□□□□□ -0.41
LRRC49-227ENST00000561081 SLC10A5Q5PT55 438 aa12.49□□□□□ -0.41
LRRC49-227ENST00000561081 TBC1D10CQ8IV04 446 aa12.49□□□□□ -0.41
LRRC49-227ENST00000561081 ANKRD18AQ8IVF6 992 aa12.49□□□□□ -0.41
LRRC49-227ENST00000561081 KLHL34Q8N239 644 aa12.49□□□□□ -0.41
LRRC49-227ENST00000561081 TRIM44Q96DX7 344 aaPredicted RBP12.49□□□□□ -0.41
LRRC49-227ENST00000561081 TFIP11Q9UBB9 837 aaKnown RBP12.49□□□□□ -0.41
LRRC49-227ENST00000561081 NARFQ9UHQ1 456 aa12.49□□□□□ -0.41
LRRC49-227ENST00000561081 ZMYM6O95789 1325 aa12.49□□□□□ -0.41
LRRC49-227ENST00000561081 RPS6KA4O75676 772 aa12.48□□□□□ -0.41
LRRC49-227ENST00000561081 BICDL1Q6ZP65 573 aa12.48□□□□□ -0.41
LRRC49-227ENST00000561081 LEO1Q8WVC0 666 aaPredicted RBP12.48□□□□□ -0.41
LRRC49-227ENST00000561081 SPATA32Q96LK8 384 aa12.48□□□□□ -0.41
LRRC49-227ENST00000561081 BSDC1Q9NW68 430 aaPredicted RBP12.48□□□□□ -0.41
LRRC49-227ENST00000561081 PATL2C9JE40 543 aaKnown RBP12.48□□□□□ -0.41
LRRC49-227ENST00000561081 TRDNQ13061 729 aa12.48□□□□□ -0.41
LRRC49-227ENST00000561081 HPS5Q9UPZ3 1129 aa12.48□□□□□ -0.41
LRRC49-227ENST00000561081 COL24A1Q17RW2 1714 aa12.48□□□□□ -0.41
LRRC49-227ENST00000561081 TAF1P21675 1872 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms