RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 SMAP1Q8IYB5 467 aaPredicted RBP2.57□□□□□ -2
RTF1-207ENST00000561076 AHI1Q8N157 1196 aa2.57□□□□□ -2
RTF1-207ENST00000561076 LRRC47Q8N1G4 583 aaKnown RBP2.57□□□□□ -2
RTF1-207ENST00000561076 TMTC2Q8N394 836 aa2.57□□□□□ -2
RTF1-207ENST00000561076 FAM160A2Q8N612 972 aaPredicted RBP2.57□□□□□ -2
RTF1-207ENST00000561076 UBR7Q8N806 425 aa2.57□□□□□ -2
RTF1-207ENST00000561076 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.57□□□□□ -2
RTF1-207ENST00000561076 JARID2Q92833 1246 aaPredicted RBP2.57□□□□□ -2
RTF1-207ENST00000561076 NINJ1Q92982 152 aa2.57□□□□□ -2
RTF1-207ENST00000561076 CNKSR1Q969H4 720 aa2.57□□□□□ -2
RTF1-207ENST00000561076 AIDAQ96BJ3 306 aa2.57□□□□□ -2
RTF1-207ENST00000561076 NAP1L5Q96NT1 182 aaPredicted RBP2.57□□□□□ -2
RTF1-207ENST00000561076 ARPC5LQ9BPX5 153 aa2.57□□□□□ -2
RTF1-207ENST00000561076 SENP7Q9BQF6 1050 aa2.57□□□□□ -2
RTF1-207ENST00000561076 OXCT2Q9BYC2 517 aaPredicted RBP2.57□□□□□ -2
RTF1-207ENST00000561076 KANSL2Q9H9L4 492 aa2.57□□□□□ -2
RTF1-207ENST00000561076 ELP3Q9H9T3 547 aa2.57□□□□□ -2
RTF1-207ENST00000561076 PPCSQ9HAB8 311 aa2.57□□□□□ -2
RTF1-207ENST00000561076 ARNT2Q9HBZ2 717 aa2.57□□□□□ -2
RTF1-207ENST00000561076 SCUBE2Q9NQ36 999 aa2.57□□□□□ -2
RTF1-207ENST00000561076 JADE2Q9NQC1 790 aa2.57□□□□□ -2
RTF1-207ENST00000561076 PRDM10Q9NQV6 1147 aa2.57□□□□□ -2
RTF1-207ENST00000561076 ZIM2Q9NZV7 527 aa2.57□□□□□ -2
RTF1-207ENST00000561076 PPT2Q9UMR5 302 aa2.57□□□□□ -2
RTF1-207ENST00000561076 VPS9D1Q9Y2B5 631 aa2.57□□□□□ -2
RTF1-207ENST00000561076 PARP3Q9Y6F1 533 aa2.57□□□□□ -2
RTF1-207ENST00000561076 GJA3Q9Y6H8 435 aa2.57□□□□□ -2
RTF1-207ENST00000561076 ROBO2Q9HCK4 1378 aa2.57□□□□□ -2
RTF1-207ENST00000561076 SHTN1A0MZ66 631 aa2.56□□□□□ -2
RTF1-207ENST00000561076 TGFBR3LH3BV60 316 aa2.56□□□□□ -2
RTF1-207ENST00000561076 EML1O00423 815 aa2.56□□□□□ -2
RTF1-207ENST00000561076 FBXO24O75426 580 aa2.56□□□□□ -2
RTF1-207ENST00000561076 SCGB1D2O95969 90 aa2.56□□□□□ -2
RTF1-207ENST00000561076 NAT2P11245 290 aa2.56□□□□□ -2
RTF1-207ENST00000561076 STAT3P40763 770 aa2.56□□□□□ -2
RTF1-207ENST00000561076 LIG3P49916 1009 aa2.56□□□□□ -2
RTF1-207ENST00000561076 IDH3AP50213 366 aa2.56□□□□□ -2
RTF1-207ENST00000561076 NEK2P51955 445 aa2.56□□□□□ -2
RTF1-207ENST00000561076 LMNB2Q03252 620 aa2.56□□□□□ -2
RTF1-207ENST00000561076 CAMK2GQ13555 558 aaPredicted RBP2.56□□□□□ -2
RTF1-207ENST00000561076 GRM2Q14416 872 aa2.56□□□□□ -2
RTF1-207ENST00000561076 MLC1Q15049 377 aa2.56□□□□□ -2
RTF1-207ENST00000561076 MTFR1Q15390 333 aa2.56□□□□□ -2
RTF1-207ENST00000561076 NFE2Q16621 373 aaPredicted RBP2.56□□□□□ -2
RTF1-207ENST00000561076 TKFCQ3LXA3 575 aa2.56□□□□□ -2
RTF1-207ENST00000561076 ANO1Q5XXA6 986 aa2.56□□□□□ -2
RTF1-207ENST00000561076 TTBK2Q6IQ55 1244 aa2.56□□□□□ -2
RTF1-207ENST00000561076 CCDC70Q6NSX1 233 aa2.56□□□□□ -2
RTF1-207ENST00000561076 PRPF40BQ6NWY9 871 aaKnown RBP2.56□□□□□ -2
RTF1-207ENST00000561076 GK5Q6ZS86 529 aa2.56□□□□□ -2
RTF1-207ENST00000561076 C14orf80Q86SX3 495 aa2.56□□□□□ -2
RTF1-207ENST00000561076 GALNT12Q8IXK2 581 aa2.56□□□□□ -2
RTF1-207ENST00000561076 CCDC116Q8IYX3 515 aa2.56□□□□□ -2
RTF1-207ENST00000561076 CPXCR1Q8N123 301 aa2.56□□□□□ -2
RTF1-207ENST00000561076 NME8Q8N427 588 aa2.56□□□□□ -2
RTF1-207ENST00000561076 CELF2-AS1Q8N7Q2 184 aa2.56□□□□□ -2
RTF1-207ENST00000561076 ZNF784Q8NCA9 323 aaPredicted RBP2.56□□□□□ -2
RTF1-207ENST00000561076 EHBP1Q8NDI1 1231 aa2.56□□□□□ -2
RTF1-207ENST00000561076 ST13P5Q8NFI4 369 aaPredicted RBP2.56□□□□□ -2
RTF1-207ENST00000561076 RIN3Q8TB24 985 aa2.56□□□□□ -2
RTF1-207ENST00000561076 EMID1Q96A84 441 aaPredicted RBP2.56□□□□□ -2
RTF1-207ENST00000561076 EVI5LQ96CN4 794 aa2.56□□□□□ -2
RTF1-207ENST00000561076 SHDQ96IW2 340 aa2.56□□□□□ -2
RTF1-207ENST00000561076 SCLT1Q96NL6 688 aa2.56□□□□□ -2
RTF1-207ENST00000561076 ZSCAN10Q96SZ4 725 aaPredicted RBP2.56□□□□□ -2
RTF1-207ENST00000561076 PAGR1Q9BTK6 254 aa2.56□□□□□ -2
RTF1-207ENST00000561076 RUSC1Q9BVN2 902 aa2.56□□□□□ -2
RTF1-207ENST00000561076 C1QTNF2Q9BXJ5 285 aa2.56□□□□□ -2
RTF1-207ENST00000561076 MIR1-1HGQ9H1L0 117 aa2.56□□□□□ -2
RTF1-207ENST00000561076 TMPRSS4Q9NRS4 437 aa2.56□□□□□ -2
RTF1-207ENST00000561076 USP25Q9UHP3 1055 aa2.56□□□□□ -2
RTF1-207ENST00000561076 GPN3Q9UHW5 284 aaPredicted RBP2.56□□□□□ -2
RTF1-207ENST00000561076 ZNF180Q9UJW8 692 aa2.56□□□□□ -2
RTF1-207ENST00000561076 RCAN3Q9UKA8 241 aa2.56□□□□□ -2
RTF1-207ENST00000561076 INTUQ9ULD6 942 aa2.56□□□□□ -2
RTF1-207ENST00000561076 NOB1Q9ULX3 412 aaKnown RBP2.56□□□□□ -2
RTF1-207ENST00000561076 AXIN2Q9Y2T1 843 aa2.56□□□□□ -2
RTF1-207ENST00000561076 THRAP3Q9Y2W1 955 aaKnown RBP2.56□□□□□ -2
RTF1-207ENST00000561076 MSRB2Q9Y3D2 182 aa2.56□□□□□ -2
RTF1-207ENST00000561076 MAP4K5Q9Y4K4 846 aa2.56□□□□□ -2
RTF1-207ENST00000561076 SLC12A7Q9Y666 1083 aa2.56□□□□□ -2
RTF1-207ENST00000561076 POTEFA5A3E0 1075 aa2.55□□□□□ -2
RTF1-207ENST00000561076 SOWAHBA6NEL2 793 aa2.55□□□□□ -2
RTF1-207ENST00000561076 CCER2I3L3R5 266 aa2.55□□□□□ -2
RTF1-207ENST00000561076 TBX3O15119 743 aa2.55□□□□□ -2
RTF1-207ENST00000561076 KATNA1O75449 491 aa2.55□□□□□ -2
RTF1-207ENST00000561076 GABBR2O75899 941 aa2.55□□□□□ -2
RTF1-207ENST00000561076 GJB6O95452 261 aa2.55□□□□□ -2
RTF1-207ENST00000561076 MYL3P08590 195 aa2.55□□□□□ -2
RTF1-207ENST00000561076 HOXB1P14653 301 aaPredicted RBP2.55□□□□□ -2
RTF1-207ENST00000561076 MCCP23508 829 aa2.55□□□□□ -2
RTF1-207ENST00000561076 FLT3P36888 993 aa2.55□□□□□ -2
RTF1-207ENST00000561076 GIPRP48546 466 aa2.55□□□□□ -2
RTF1-207ENST00000561076 RAB27AP51159 221 aa2.55□□□□□ -2
RTF1-207ENST00000561076 NEK4P51957 841 aa2.55□□□□□ -2
RTF1-207ENST00000561076 HIRAP54198 1017 aaPredicted RBP2.55□□□□□ -2
RTF1-207ENST00000561076 SH3BP2P78314 561 aa2.55□□□□□ -2
RTF1-207ENST00000561076 PPP2R3AQ06190 1150 aa2.55□□□□□ -2
RTF1-207ENST00000561076 CBLBQ13191 982 aa2.55□□□□□ -2
RTF1-207ENST00000561076 PABPC4Q13310 644 aaKnown RBP eCLIP2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms