RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 IGKV5-2P06315 115 aa10.06□□□□□ -0.8
CCDC33-209ENST00000560565 ZSCAN20P17040 1043 aaPredicted RBP10.06□□□□□ -0.8
CCDC33-209ENST00000560565 ERC1Q8IUD2 1116 aa10.06□□□□□ -0.8
CCDC33-209ENST00000560565 TTLL6Q8N841 843 aa10.06□□□□□ -0.8
CCDC33-209ENST00000560565 CCDC112Q8NEF3 446 aa10.06□□□□□ -0.8
CCDC33-209ENST00000560565 SSH3Q8TE77 659 aa10.06□□□□□ -0.8
CCDC33-209ENST00000560565 ZNF622Q969S3 477 aaKnown RBP eCLIP10.06□□□□□ -0.8
CCDC33-209ENST00000560565 MYD88Q99836 296 aa10.06□□□□□ -0.8
CCDC33-209ENST00000560565 PODXL2Q9NZ53 605 aa10.06□□□□□ -0.8
CCDC33-209ENST00000560565 LRRFIP2Q9Y608 721 aaKnown RBP10.06□□□□□ -0.8
CCDC33-209ENST00000560565 ANKRD31Q8N7Z5 1873 aa10.06□□□□□ -0.8
CCDC33-209ENST00000560565 GPTP24298 496 aa10.05□□□□□ -0.8
CCDC33-209ENST00000560565 TCIRG1Q13488 830 aa10.05□□□□□ -0.8
CCDC33-209ENST00000560565 POLA2Q14181 598 aa10.05□□□□□ -0.8
CCDC33-209ENST00000560565 SLFNL1Q499Z3 407 aa10.05□□□□□ -0.8
CCDC33-209ENST00000560565 ATL3Q6DD88 541 aa10.05□□□□□ -0.8
CCDC33-209ENST00000560565 GIGYF2Q6Y7W6 1299 aaKnown RBP10.05□□□□□ -0.8
CCDC33-209ENST00000560565 RILPL2Q969X0 211 aa10.05□□□□□ -0.8
CCDC33-209ENST00000560565 KIF1BPQ96EK5 621 aa10.05□□□□□ -0.8
CCDC33-209ENST00000560565 ISCA1Q9BUE6 129 aa10.05□□□□□ -0.8
CCDC33-209ENST00000560565 NYXQ9GZU5 481 aa10.05□□□□□ -0.8
CCDC33-209ENST00000560565 NUP62CLQ9H1M0 184 aa10.05□□□□□ -0.8
CCDC33-209ENST00000560565 CWC25Q9NXE8 425 aaPredicted RBP10.05□□□□□ -0.8
CCDC33-209ENST00000560565 CYP46A1Q9Y6A2 500 aa10.05□□□□□ -0.8
CCDC33-209ENST00000560565 DLEC1Q9Y238 1755 aa10.04□□□□□ -0.8
CCDC33-209ENST00000560565 H7C1W4 665 aa10.04□□□□□ -0.8
CCDC33-209ENST00000560565 GLRX3O76003 335 aaKnown RBP10.04□□□□□ -0.8
CCDC33-209ENST00000560565 NBPF7P0C2Y1 421 aaPredicted RBP10.04□□□□□ -0.8
CCDC33-209ENST00000560565 GSDMDP57764 484 aa10.04□□□□□ -0.8
CCDC33-209ENST00000560565 CWF19L2Q2TBE0 894 aaKnown RBP10.04□□□□□ -0.8
CCDC33-209ENST00000560565 TICAM2Q86XR7 235 aa10.04□□□□□ -0.8
CCDC33-209ENST00000560565 ZNF34Q8IZ26 560 aa10.04□□□□□ -0.8
CCDC33-209ENST00000560565 ALDH8A1Q9H2A2 487 aaPredicted RBP10.04□□□□□ -0.8
CCDC33-209ENST00000560565 DDX60Q8IY21 1712 aaKnown RBP10.04□□□□□ -0.8
CCDC33-209ENST00000560565 GOLGA6L19H0YKK7 550 aa10.03□□□□□ -0.8
CCDC33-209ENST00000560565 SGSM2O43147 1006 aa10.03□□□□□ -0.8
CCDC33-209ENST00000560565 TPM1P09493 284 aa10.03□□□□□ -0.8
CCDC33-209ENST00000560565 SRGNP10124 158 aa10.03□□□□□ -0.8
CCDC33-209ENST00000560565 HCLS1P14317 486 aaPredicted RBP10.03□□□□□ -0.8
CCDC33-209ENST00000560565 SYT1P21579 422 aa10.03□□□□□ -0.8
CCDC33-209ENST00000560565 PARP10Q53GL7 1025 aa10.03□□□□□ -0.8
CCDC33-209ENST00000560565 STYK1Q6J9G0 422 aa10.03□□□□□ -0.8
CCDC33-209ENST00000560565 PPP1R42Q7Z4L9 355 aa10.03□□□□□ -0.8
CCDC33-209ENST00000560565 DRC7Q8IY82 874 aa10.03□□□□□ -0.8
CCDC33-209ENST00000560565 C16orf71Q8IYS4 520 aaPredicted RBP10.03□□□□□ -0.8
CCDC33-209ENST00000560565 CNKSR1Q969H4 720 aa10.03□□□□□ -0.8
CCDC33-209ENST00000560565 MASTLQ96GX5 879 aa10.03□□□□□ -0.8
CCDC33-209ENST00000560565 NAT10Q9H0A0 1025 aaKnown RBP10.03□□□□□ -0.8
CCDC33-209ENST00000560565 PRDM10Q9NQV6 1147 aa10.03□□□□□ -0.8
CCDC33-209ENST00000560565 KLRG2A4D1S0 409 aaPredicted RBP10.02□□□□□ -0.81
CCDC33-209ENST00000560565 SRGAP3O43295 1099 aa10.02□□□□□ -0.81
CCDC33-209ENST00000560565 HSP90B1P14625 803 aaKnown RBP10.02□□□□□ -0.81
CCDC33-209ENST00000560565 NPR1P16066 1061 aa10.02□□□□□ -0.81
CCDC33-209ENST00000560565 CASP7P55210 303 aa10.02□□□□□ -0.81
CCDC33-209ENST00000560565 TPM4P67936 248 aa10.02□□□□□ -0.81
CCDC33-209ENST00000560565 KRT32Q14532 448 aa10.02□□□□□ -0.81
CCDC33-209ENST00000560565 RABL6Q3YEC7 729 aaPredicted RBP10.02□□□□□ -0.81
CCDC33-209ENST00000560565 ERFEQ4G0M1 354 aa10.02□□□□□ -0.81
CCDC33-209ENST00000560565 SUSD4Q5VX71 490 aa10.02□□□□□ -0.81
CCDC33-209ENST00000560565 NUTM1Q86Y26 1132 aa10.02□□□□□ -0.81
CCDC33-209ENST00000560565 KRT222Q8N1A0 295 aa10.02□□□□□ -0.81
CCDC33-209ENST00000560565 ZNF397Q8NF99 534 aaPredicted RBP10.02□□□□□ -0.81
CCDC33-209ENST00000560565 FUCA2Q9BTY2 467 aa10.02□□□□□ -0.81
CCDC33-209ENST00000560565 KCND1Q9NSA2 647 aa10.02□□□□□ -0.81
CCDC33-209ENST00000560565 HMG20BQ9P0W2 317 aa10.02□□□□□ -0.81
CCDC33-209ENST00000560565 CALCOCO1Q9P1Z2 691 aa10.02□□□□□ -0.81
CCDC33-209ENST00000560565 CFAP45Q9UL16 551 aa10.02□□□□□ -0.81
CCDC33-209ENST00000560565 UBN2Q6ZU65 1347 aa10.02□□□□□ -0.81
CCDC33-209ENST00000560565 CDHR2Q9BYE9 1310 aa10.02□□□□□ -0.81
CCDC33-209ENST00000560565 PNMA6EA0A0J9YXQ4 647 aa10.01□□□□□ -0.81
CCDC33-209ENST00000560565 C21orf2O43822 256 aa10.01□□□□□ -0.81
CCDC33-209ENST00000560565 SMARCA5O60264 1052 aaPredicted RBP10.01□□□□□ -0.81
CCDC33-209ENST00000560565 PCCAP05165 728 aaPredicted RBP10.01□□□□□ -0.81
CCDC33-209ENST00000560565 CDK11BP21127 795 aaKnown RBP10.01□□□□□ -0.81
CCDC33-209ENST00000560565 SARM1Q6SZW1 724 aa10.01□□□□□ -0.81
CCDC33-209ENST00000560565 ZNF771Q7L3S4 317 aaPredicted RBP10.01□□□□□ -0.81
CCDC33-209ENST00000560565 TDRD7Q8NHU6 1098 aaKnown RBP10.01□□□□□ -0.81
CCDC33-209ENST00000560565 SUCLG2Q96I99 432 aa10.01□□□□□ -0.81
CCDC33-209ENST00000560565 TTC14Q96N46 770 aa10.01□□□□□ -0.81
CCDC33-209ENST00000560565 UTP14AQ9BVJ6 771 aaKnown RBP10.01□□□□□ -0.81
CCDC33-209ENST00000560565 PLA2G12BQ9BX93 195 aa10.01□□□□□ -0.81
CCDC33-209ENST00000560565 TNMDQ9H2S6 317 aa10.01□□□□□ -0.81
CCDC33-209ENST00000560565 ZSCAN16Q9H4T2 348 aaPredicted RBP10.01□□□□□ -0.81
CCDC33-209ENST00000560565 TTC12Q9H892 705 aaPredicted RBP10.01□□□□□ -0.81
CCDC33-209ENST00000560565 PDRG1Q9NUG6 133 aa10.01□□□□□ -0.81
CCDC33-209ENST00000560565 ARGLU1Q9NWB6 273 aaPredicted RBP10.01□□□□□ -0.81
CCDC33-209ENST00000560565 ZNF219Q9P2Y4 722 aaPredicted RBP10.01□□□□□ -0.81
CCDC33-209ENST00000560565 SBF1O95248 1867 aa10.01□□□□□ -0.81
CCDC33-209ENST00000560565 CACNA1SQ13698 1873 aa10.01□□□□□ -0.81
CCDC33-209ENST00000560565 COL11A2P13942 1736 aaPredicted RBP10.01□□□□□ -0.81
CCDC33-209ENST00000560565 SLX4Q8IY92 1834 aa10□□□□□ -0.81
CCDC33-209ENST00000560565 CCDC88AQ3V6T2 1871 aa10□□□□□ -0.81
CCDC33-209ENST00000560565 ATP5J2-PTCD1G3V325 749 aa10□□□□□ -0.81
CCDC33-209ENST00000560565 RIOK3O14730 519 aaKnown RBP10□□□□□ -0.81
CCDC33-209ENST00000560565 NTSR2O95665 410 aa10□□□□□ -0.81
CCDC33-209ENST00000560565 ALDH1B1P30837 517 aa10□□□□□ -0.81
CCDC33-209ENST00000560565 KCNJ6P48051 423 aa10□□□□□ -0.81
CCDC33-209ENST00000560565 PLCB2Q00722 1185 aa10□□□□□ -0.81
CCDC33-209ENST00000560565 TEX35Q5T0J7 233 aa10□□□□□ -0.81
CCDC33-209ENST00000560565 C9orf131Q5VYM1 1079 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms