RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 HGSNATQ68CP4 663 aa6.83□□□□□ -1.32
TMOD3-207ENST00000560549 ZFYVE28Q9HCC9 887 aa6.83□□□□□ -1.32
TMOD3-207ENST00000560549 ADAM11O75078 769 aa6.82□□□□□ -1.32
TMOD3-207ENST00000560549 CDC27P30260 824 aa6.82□□□□□ -1.32
TMOD3-207ENST00000560549 EHHADHQ08426 723 aa6.82□□□□□ -1.32
TMOD3-207ENST00000560549 OSMRQ99650 979 aa6.82□□□□□ -1.32
TMOD3-207ENST00000560549 GZF1Q9H116 711 aaPredicted RBP6.82□□□□□ -1.32
TMOD3-207ENST00000560549 AKTIPQ9H8T0 292 aa6.82□□□□□ -1.32
TMOD3-207ENST00000560549 SOX13Q9UN79 622 aa6.82□□□□□ -1.32
TMOD3-207ENST00000560549 GNEQ9Y223 722 aaKnown RBP6.82□□□□□ -1.32
TMOD3-207ENST00000560549 IVNS1ABPQ9Y6Y0 642 aa6.82□□□□□ -1.32
TMOD3-207ENST00000560549 METTL12A8MUP2 240 aa6.81□□□□□ -1.32
TMOD3-207ENST00000560549 PDE2AO00408 941 aaPredicted RBP6.81□□□□□ -1.32
TMOD3-207ENST00000560549 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.81□□□□□ -1.32
TMOD3-207ENST00000560549 AGGF1Q8N302 714 aaeCLIP6.81□□□□□ -1.32
TMOD3-207ENST00000560549 TTC16Q8NEE8 873 aa6.81□□□□□ -1.32
TMOD3-207ENST00000560549 NXPE3Q969Y0 559 aa6.81□□□□□ -1.32
TMOD3-207ENST00000560549 BRPF3Q9ULD4 1205 aa6.81□□□□□ -1.32
TMOD3-207ENST00000560549 AMOTL2Q9Y2J4 779 aa6.81□□□□□ -1.32
TMOD3-207ENST00000560549 CADPSQ9ULU8 1353 aa6.81□□□□□ -1.32
TMOD3-207ENST00000560549 FSCN2O14926 492 aa6.8□□□□□ -1.32
TMOD3-207ENST00000560549 DDX3YO15523 660 aaKnown RBP6.8□□□□□ -1.32
TMOD3-207ENST00000560549 PTPRAP18433 802 aa6.8□□□□□ -1.32
TMOD3-207ENST00000560549 TMEM102Q8N9M5 508 aaPredicted RBP6.8□□□□□ -1.32
TMOD3-207ENST00000560549 CCER1Q8TC90 406 aaPredicted RBP6.8□□□□□ -1.32
TMOD3-207ENST00000560549 FOXD4L4Q8WXT5 416 aaPredicted RBP6.8□□□□□ -1.32
TMOD3-207ENST00000560549 VN1R5Q7Z5H4 357 aa6.79□□□□□ -1.32
TMOD3-207ENST00000560549 PMEPA1Q969W9 287 aa6.79□□□□□ -1.32
TMOD3-207ENST00000560549 KLHDC7BQ96G42 594 aa6.79□□□□□ -1.32
TMOD3-207ENST00000560549 CCDC9Q9Y3X0 531 aaKnown RBP6.79□□□□□ -1.32
TMOD3-207ENST00000560549 PDS5BQ9NTI5 1447 aa6.79□□□□□ -1.32
TMOD3-207ENST00000560549 H3BRJ5 948 aa6.79□□□□□ -1.32
TMOD3-207ENST00000560549 NDUFB5O43674 189 aa6.79□□□□□ -1.32
TMOD3-207ENST00000560549 CD68P34810 354 aaPredicted RBP6.79□□□□□ -1.32
TMOD3-207ENST00000560549 PRR23CQ6ZRP0 262 aa6.79□□□□□ -1.32
TMOD3-207ENST00000560549 KLHL23Q8NBE8 558 aa6.79□□□□□ -1.32
TMOD3-207ENST00000560549 UBASH3BQ8TF42 649 aa6.79□□□□□ -1.32
TMOD3-207ENST00000560549 WNT8BQ93098 351 aa6.79□□□□□ -1.32
TMOD3-207ENST00000560549 SOGA1O94964 1423 aa6.78□□□□□ -1.32
TMOD3-207ENST00000560549 A0A1W2PP55 124 aa6.78□□□□□ -1.32
TMOD3-207ENST00000560549 EDN3P14138 238 aa6.78□□□□□ -1.32
TMOD3-207ENST00000560549 ARTNQ5T4W7 220 aa6.78□□□□□ -1.32
TMOD3-207ENST00000560549 GALNT12Q8IXK2 581 aa6.78□□□□□ -1.32
TMOD3-207ENST00000560549 BHLHE41Q9C0J9 482 aaPredicted RBP6.78□□□□□ -1.32
TMOD3-207ENST00000560549 RUSC2Q8N2Y8 1516 aa6.77□□□□□ -1.33
TMOD3-207ENST00000560549 CFTRP13569 1480 aa6.77□□□□□ -1.33
TMOD3-207ENST00000560549 SLC51AQ86UW1 340 aa6.77□□□□□ -1.33
TMOD3-207ENST00000560549 TCF12Q99081 682 aa6.77□□□□□ -1.33
TMOD3-207ENST00000560549 PCGF6Q9BYE7 350 aa6.77□□□□□ -1.33
TMOD3-207ENST00000560549 NIF3L1Q9GZT8 377 aa6.77□□□□□ -1.33
TMOD3-207ENST00000560549 NPHS2Q9NP85 383 aa6.77□□□□□ -1.33
TMOD3-207ENST00000560549 KIF21AQ7Z4S6 1674 aa6.76□□□□□ -1.33
TMOD3-207ENST00000560549 SOX1O00570 391 aaPredicted RBP6.76□□□□□ -1.33
TMOD3-207ENST00000560549 GRIA4P48058 902 aa6.76□□□□□ -1.33
TMOD3-207ENST00000560549 PIP4K2BP78356 416 aa6.76□□□□□ -1.33
TMOD3-207ENST00000560549 KIAA1211Q6ZU35 1233 aa6.76□□□□□ -1.33
TMOD3-207ENST00000560549 TMC7Q7Z402 723 aa6.76□□□□□ -1.33
TMOD3-207ENST00000560549 ASAP3Q8TDY4 903 aa6.76□□□□□ -1.33
TMOD3-207ENST00000560549 SLC7A3Q8WY07 619 aa6.76□□□□□ -1.33
TMOD3-207ENST00000560549 UBL7Q96S82 380 aaPredicted RBP6.76□□□□□ -1.33
TMOD3-207ENST00000560549 RBCK1Q9BYM8 510 aa6.76□□□□□ -1.33
TMOD3-207ENST00000560549 OSGEPQ9NPF4 335 aa6.76□□□□□ -1.33
TMOD3-207ENST00000560549 PRDM2Q13029 1718 aa6.75□□□□□ -1.33
TMOD3-207ENST00000560549 WRNQ14191 1432 aaPredicted RBP eCLIP6.75□□□□□ -1.33
TMOD3-207ENST00000560549 PATL2C9JE40 543 aaKnown RBP6.75□□□□□ -1.33
TMOD3-207ENST00000560549 SPRED3Q2MJR0 410 aa6.75□□□□□ -1.33
TMOD3-207ENST00000560549 BSNDQ8WZ55 320 aa6.75□□□□□ -1.33
TMOD3-207ENST00000560549 SEC31BQ9NQW1 1179 aa6.75□□□□□ -1.33
TMOD3-207ENST00000560549 EIF1AYO14602 144 aaKnown RBP6.74□□□□□ -1.33
TMOD3-207ENST00000560549 NLRP12P59046 1061 aa6.74□□□□□ -1.33
TMOD3-207ENST00000560549 FAM117BQ6P1L5 589 aa6.74□□□□□ -1.33
TMOD3-207ENST00000560549 ACAD11Q709F0 780 aa6.74□□□□□ -1.33
TMOD3-207ENST00000560549 SND1Q7KZF4 910 aaKnown RBP eCLIP6.74□□□□□ -1.33
TMOD3-207ENST00000560549 CCNJLQ8IV13 435 aa6.74□□□□□ -1.33
TMOD3-207ENST00000560549 ALKBH8Q96BT7 664 aaKnown RBP6.74□□□□□ -1.33
TMOD3-207ENST00000560549 CITED4Q96RK1 184 aa6.74□□□□□ -1.33
TMOD3-207ENST00000560549 BIN2Q9UBW5 565 aaPredicted RBP6.74□□□□□ -1.33
TMOD3-207ENST00000560549 THOC2Q8NI27 1593 aaKnown RBP6.74□□□□□ -1.33
TMOD3-207ENST00000560549 CPNE3O75131 537 aaKnown RBP6.73□□□□□ -1.33
TMOD3-207ENST00000560549 ESRRAP11474 423 aaPredicted RBP6.73□□□□□ -1.33
TMOD3-207ENST00000560549 PDE3BQ13370 1112 aa6.73□□□□□ -1.33
TMOD3-207ENST00000560549 LRP8Q14114 963 aa6.73□□□□□ -1.33
TMOD3-207ENST00000560549 PI16Q6UXB8 463 aa6.73□□□□□ -1.33
TMOD3-207ENST00000560549 ARMC10Q8N2F6 343 aa6.73□□□□□ -1.33
TMOD3-207ENST00000560549 FAM46AQ96IP4 442 aaKnown RBP6.73□□□□□ -1.33
TMOD3-207ENST00000560549 LIN7BQ9HAP6 207 aa6.73□□□□□ -1.33
TMOD3-207ENST00000560549 RNF112Q9ULX5 631 aa6.73□□□□□ -1.33
TMOD3-207ENST00000560549 FANCD2Q9BXW9 1451 aa6.73□□□□□ -1.33
TMOD3-207ENST00000560549 SYNJ1O43426 1573 aa6.73□□□□□ -1.33
TMOD3-207ENST00000560549 DLGAP3O95886 979 aa6.73□□□□□ -1.33
TMOD3-207ENST00000560549 MFAP1P55081 439 aaKnown RBP6.73□□□□□ -1.33
TMOD3-207ENST00000560549 UVSSAQ2YD98 709 aa6.73□□□□□ -1.33
TMOD3-207ENST00000560549 TMCO4Q5TGY1 634 aa6.73□□□□□ -1.33
TMOD3-207ENST00000560549 RGS22Q8NE09 1264 aa6.73□□□□□ -1.33
TMOD3-207ENST00000560549 GLIS3Q8NEA6 775 aa6.73□□□□□ -1.33
TMOD3-207ENST00000560549 CCDC74AQ96AQ1 378 aa6.73□□□□□ -1.33
TMOD3-207ENST00000560549 NRSN2Q9GZP1 204 aa6.73□□□□□ -1.33
TMOD3-207ENST00000560549 ZFP64Q9NPA5 681 aa6.73□□□□□ -1.33
TMOD3-207ENST00000560549 DCTN4Q9UJW0 460 aa6.73□□□□□ -1.33
TMOD3-207ENST00000560549 CEP164Q9UPV0 1460 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms