RNA–Protein interactions for RNA: ENST00000560527.1

USP8-211, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 4

Gene USP8, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-211ENST00000560527 FURINP09958 794 aa6.37□□□□□ -1.39
USP8-211ENST00000560527 USP17L7P0C7H9 530 aa6.37□□□□□ -1.39
USP8-211ENST00000560527 GRIA4P48058 902 aa6.37□□□□□ -1.39
USP8-211ENST00000560527 ST13P50502 369 aaKnown RBP6.37□□□□□ -1.39
USP8-211ENST00000560527 GRIK5Q16478 980 aa6.37□□□□□ -1.39
USP8-211ENST00000560527 BACH2Q9BYV9 841 aa6.37□□□□□ -1.39
USP8-211ENST00000560527 MUC3BQ9H195 1237 aa6.37□□□□□ -1.39
USP8-211ENST00000560527 METTL5Q9NRN9 209 aaKnown RBP6.37□□□□□ -1.39
USP8-211ENST00000560527 IGSF5Q9NSI5 407 aa6.37□□□□□ -1.39
USP8-211ENST00000560527 USP31Q70CQ4 1352 aa6.36□□□□□ -1.39
USP8-211ENST00000560527 EIF4EBP3O60516 100 aaPredicted RBP6.36□□□□□ -1.39
USP8-211ENST00000560527 TRPA1O75762 1119 aa6.36□□□□□ -1.39
USP8-211ENST00000560527 ALBP02768 609 aa6.36□□□□□ -1.39
USP8-211ENST00000560527 FCGRTP55899 365 aa6.36□□□□□ -1.39
USP8-211ENST00000560527 LDLRAD1Q5T700 205 aa6.36□□□□□ -1.39
USP8-211ENST00000560527 HHIPQ96QV1 700 aa6.36□□□□□ -1.39
USP8-211ENST00000560527 JPH1Q9HDC5 661 aaPredicted RBP6.36□□□□□ -1.39
USP8-211ENST00000560527 SOX13Q9UN79 622 aa6.36□□□□□ -1.39
USP8-211ENST00000560527 FAM177BA6PVY3 158 aa6.35□□□□□ -1.39
USP8-211ENST00000560527 M0R082 166 aa6.35□□□□□ -1.39
USP8-211ENST00000560527 PIK3R2O00459 728 aa6.35□□□□□ -1.39
USP8-211ENST00000560527 SCAMP3O14828 347 aaKnown RBP6.35□□□□□ -1.39
USP8-211ENST00000560527 CDC27P30260 824 aa6.35□□□□□ -1.39
USP8-211ENST00000560527 AFF1P51825 1210 aaKnown RBP6.35□□□□□ -1.39
USP8-211ENST00000560527 TAF1CQ15572 869 aaPredicted RBP6.35□□□□□ -1.39
USP8-211ENST00000560527 TSNAXIP1Q2TAA8 658 aa6.35□□□□□ -1.39
USP8-211ENST00000560527 DTHD1Q6ZMT9 781 aa6.35□□□□□ -1.39
USP8-211ENST00000560527 ZNF417Q8TAU3 575 aa6.35□□□□□ -1.39
USP8-211ENST00000560527 NUDT8Q8WV74 236 aa6.35□□□□□ -1.39
USP8-211ENST00000560527 ZNF587Q96SQ5 575 aaPredicted RBP6.35□□□□□ -1.39
USP8-211ENST00000560527 ZNF576Q9H609 170 aa6.35□□□□□ -1.39
USP8-211ENST00000560527 TRIM33Q9UPN9 1127 aa6.35□□□□□ -1.39
USP8-211ENST00000560527 METTL12A8MUP2 240 aa6.34□□□□□ -1.39
USP8-211ENST00000560527 AMPD1P23109 780 aa6.34□□□□□ -1.39
USP8-211ENST00000560527 DGKGP49619 791 aa6.34□□□□□ -1.39
USP8-211ENST00000560527 CABP4P57796 275 aa6.34□□□□□ -1.39
USP8-211ENST00000560527 SPRED3Q2MJR0 410 aa6.34□□□□□ -1.39
USP8-211ENST00000560527 ILDR2Q71H61 639 aa6.34□□□□□ -1.39
USP8-211ENST00000560527 TMEM87AQ8NBN3 555 aa6.34□□□□□ -1.39
USP8-211ENST00000560527 ASAP3Q8TDY4 903 aa6.34□□□□□ -1.39
USP8-211ENST00000560527 NOC4LQ9BVI4 516 aaKnown RBP6.34□□□□□ -1.39
USP8-211ENST00000560527 CEP44Q9C0F1 390 aa6.34□□□□□ -1.39
USP8-211ENST00000560527 CLEC4MQ9H2X3 399 aaPredicted RBP6.34□□□□□ -1.39
USP8-211ENST00000560527 RRAGCQ9HB90 399 aa6.34□□□□□ -1.39
USP8-211ENST00000560527 SRA1Q9HD15 236 aaKnown RBP6.34□□□□□ -1.39
USP8-211ENST00000560527 KRBA1A5PL33 1030 aa6.33□□□□□ -1.4
USP8-211ENST00000560527 TCF3P15923 654 aa6.33□□□□□ -1.4
USP8-211ENST00000560527 HOXB4P17483 251 aaPredicted RBP6.33□□□□□ -1.4
USP8-211ENST00000560527 COL9A3Q14050 684 aaPredicted RBP6.33□□□□□ -1.4
USP8-211ENST00000560527 GDF6Q6KF10 455 aaPredicted RBP6.33□□□□□ -1.4
USP8-211ENST00000560527 SV2BQ7L1I2 683 aa6.33□□□□□ -1.4
USP8-211ENST00000560527 VN1R5Q7Z5H4 357 aa6.33□□□□□ -1.4
USP8-211ENST00000560527 WNT8BQ93098 351 aa6.33□□□□□ -1.4
USP8-211ENST00000560527 LACRTQ9GZZ8 138 aa6.33□□□□□ -1.4
USP8-211ENST00000560527 PPME1Q9Y570 386 aa6.33□□□□□ -1.4
USP8-211ENST00000560527 H3BRJ5 948 aa6.32□□□□□ -1.4
USP8-211ENST00000560527 B3GALT4O96024 378 aa6.32□□□□□ -1.4
USP8-211ENST00000560527 NID1P14543 1247 aa6.32□□□□□ -1.4
USP8-211ENST00000560527 MSL1Q68DK7 614 aa6.32□□□□□ -1.4
USP8-211ENST00000560527 ADAMTSL4Q6UY14 1074 aa6.32□□□□□ -1.4
USP8-211ENST00000560527 WFDC8Q8IUA0 241 aa6.32□□□□□ -1.4
USP8-211ENST00000560527 MAP4K3Q8IVH8 894 aa6.32□□□□□ -1.4
USP8-211ENST00000560527 DTWD1Q8N5C7 304 aa6.32□□□□□ -1.4
USP8-211ENST00000560527 IL22RA1Q8N6P7 574 aa6.32□□□□□ -1.4
USP8-211ENST00000560527 SOX17Q9H6I2 414 aaPredicted RBP6.32□□□□□ -1.4
USP8-211ENST00000560527 TTF2Q9UNY4 1162 aaKnown RBP6.32□□□□□ -1.4
USP8-211ENST00000560527 AKAP2Q9Y2D5 859 aa6.32□□□□□ -1.4
USP8-211ENST00000560527 ESRRAP11474 423 aaPredicted RBP6.31□□□□□ -1.4
USP8-211ENST00000560527 ZNF76P36508 570 aa6.31□□□□□ -1.4
USP8-211ENST00000560527 PIP4K2BP78356 416 aa6.31□□□□□ -1.4
USP8-211ENST00000560527 FANCCQ00597 558 aa6.31□□□□□ -1.4
USP8-211ENST00000560527 PCDH1Q08174 1060 aa6.31□□□□□ -1.4
USP8-211ENST00000560527 MEI1Q5TIA1 1274 aa6.31□□□□□ -1.4
USP8-211ENST00000560527 DDX54Q8TDD1 881 aaKnown RBP6.31□□□□□ -1.4
USP8-211ENST00000560527 DCAF11Q8TEB1 546 aa6.31□□□□□ -1.4
USP8-211ENST00000560527 RNF34Q969K3 372 aa6.31□□□□□ -1.4
USP8-211ENST00000560527 KRTAP9-2Q9BYQ4 174 aa6.31□□□□□ -1.4
USP8-211ENST00000560527 SH2B1Q9NRF2 756 aaPredicted RBP6.31□□□□□ -1.4
USP8-211ENST00000560527 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.3□□□□□ -1.4
USP8-211ENST00000560527 RLBP1P12271 317 aa6.3□□□□□ -1.4
USP8-211ENST00000560527 EPHA1P21709 976 aa6.3□□□□□ -1.4
USP8-211ENST00000560527 RANGAP1P46060 587 aaPredicted RBP6.3□□□□□ -1.4
USP8-211ENST00000560527 SNRPNP63162 240 aaKnown RBP6.3□□□□□ -1.4
USP8-211ENST00000560527 PPP2R3AQ06190 1150 aa6.3□□□□□ -1.4
USP8-211ENST00000560527 IKBKEQ14164 716 aa6.3□□□□□ -1.4
USP8-211ENST00000560527 FAM117BQ6P1L5 589 aa6.3□□□□□ -1.4
USP8-211ENST00000560527 C8orf86Q6ZUL3 223 aa6.3□□□□□ -1.4
USP8-211ENST00000560527 NECAB3Q96P71 396 aaPredicted RBP6.3□□□□□ -1.4
USP8-211ENST00000560527 OSGEPQ9NPF4 335 aa6.3□□□□□ -1.4
USP8-211ENST00000560527 SEC31BQ9NQW1 1179 aa6.3□□□□□ -1.4
USP8-211ENST00000560527 TMEM39AQ9NV64 488 aa6.3□□□□□ -1.4
USP8-211ENST00000560527 FAAP100Q0VG06 881 aa6.29□□□□□ -1.4
USP8-211ENST00000560527 ZNF423Q2M1K9 1284 aa6.29□□□□□ -1.4
USP8-211ENST00000560527 LINC00114Q6XXX2 140 aa6.29□□□□□ -1.4
USP8-211ENST00000560527 HS2ST1Q7LGA3 356 aa6.29□□□□□ -1.4
USP8-211ENST00000560527 KLHL23Q8NBE8 558 aa6.29□□□□□ -1.4
USP8-211ENST00000560527 RSRP1Q9BUV0 290 aa6.29□□□□□ -1.4
USP8-211ENST00000560527 SPDYE3A6NKU9 549 aa6.28□□□□□ -1.4
USP8-211ENST00000560527 SOX1O00570 391 aaPredicted RBP6.28□□□□□ -1.4
USP8-211ENST00000560527 GNB5O14775 395 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms