RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 BRPF1P55201 1214 aaPredicted RBP29.13■■■□□ 2.25
CRNDE-209ENST00000560208 LRRC24Q50LG9 513 aa29.13■■■□□ 2.25
CRNDE-209ENST00000560208 ZIC5Q96T25 663 aa29.13■■■□□ 2.25
CRNDE-209ENST00000560208 CCDC102AQ96A19 550 aa29.12■■■□□ 2.25
CRNDE-209ENST00000560208 ZBED3Q96IU2 234 aaPredicted RBP29.12■■■□□ 2.25
CRNDE-209ENST00000560208 FAM155AB1AL88 458 aaPredicted RBP29.11■■■□□ 2.25
CRNDE-209ENST00000560208 HIBADHP31937 336 aaKnown RBP29.11■■■□□ 2.25
CRNDE-209ENST00000560208 GYG1P46976 350 aa29.11■■■□□ 2.25
CRNDE-209ENST00000560208 FKBP1AP62942 108 aaKnown RBP29.11■■■□□ 2.25
CRNDE-209ENST00000560208 PRAMEF18Q5VWM3 479 aa29.11■■■□□ 2.25
CRNDE-209ENST00000560208 JAG2Q9Y219 1238 aa29.11■■■□□ 2.25
CRNDE-209ENST00000560208 F8W031 263 aaPredicted RBP29.1■■■□□ 2.25
CRNDE-209ENST00000560208 CAPN15O75808 1086 aa29.1■■■□□ 2.25
CRNDE-209ENST00000560208 BCAR3O75815 825 aa29.1■■■□□ 2.25
CRNDE-209ENST00000560208 FKBP1BP68106 108 aa29.1■■■□□ 2.25
CRNDE-209ENST00000560208 DLGAP5Q15398 846 aa29.1■■■□□ 2.25
CRNDE-209ENST00000560208 METTL24Q5JXM2 366 aa29.1■■■□□ 2.25
CRNDE-209ENST00000560208 KLHDC4Q8TBB5 520 aa29.1■■■□□ 2.25
CRNDE-209ENST00000560208 FAM84BQ96KN1 310 aaPredicted RBP29.1■■■□□ 2.25
CRNDE-209ENST00000560208 PAPPA2Q9BXP8 1791 aa29.1■■■□□ 2.25
CRNDE-209ENST00000560208 CA12O43570 354 aa29.09■■■□□ 2.25
CRNDE-209ENST00000560208 TDRD7Q8NHU6 1098 aaKnown RBP29.09■■■□□ 2.25
CRNDE-209ENST00000560208 API5Q9BZZ5 524 aaKnown RBP29.09■■■□□ 2.25
CRNDE-209ENST00000560208 APOBEC3FQ8IUX4 373 aaKnown RBP29.08■■■□□ 2.25
CRNDE-209ENST00000560208 MTMR14Q8NCE2 650 aa29.08■■■□□ 2.25
CRNDE-209ENST00000560208 TSKSQ9UJT2 592 aa29.08■■■□□ 2.25
CRNDE-209ENST00000560208 FAM205AQ6ZU69 1335 aa29.08■■■□□ 2.25
CRNDE-209ENST00000560208 ECM29Q5VYK3 1845 aa29.07■■■□□ 2.24
CRNDE-209ENST00000560208 FRAT1Q92837 279 aaPredicted RBP29.07■■■□□ 2.24
CRNDE-209ENST00000560208 KIF16BQ96L93 1317 aa29.06■■■□□ 2.24
CRNDE-209ENST00000560208 PDE8BO95263 885 aa29.06■■■□□ 2.24
CRNDE-209ENST00000560208 VGLL2Q8N8G2 317 aa29.06■■■□□ 2.24
CRNDE-209ENST00000560208 SLC10A3P09131 477 aa29.05■■■□□ 2.24
CRNDE-209ENST00000560208 UBTFL1P0CB47 393 aaPredicted RBP29.05■■■□□ 2.24
CRNDE-209ENST00000560208 KIF23Q02241 960 aaPredicted RBP29.05■■■□□ 2.24
CRNDE-209ENST00000560208 CFAP100Q494V2 611 aa29.05■■■□□ 2.24
CRNDE-209ENST00000560208 MOB2Q70IA6 237 aa29.05■■■□□ 2.24
CRNDE-209ENST00000560208 FBXO33Q7Z6M2 555 aa29.05■■■□□ 2.24
CRNDE-209ENST00000560208 PCDHAC2Q9Y5I4 1007 aa29.05■■■□□ 2.24
CRNDE-209ENST00000560208 NF2P35240 595 aa29.04■■■□□ 2.24
CRNDE-209ENST00000560208 RFX5P48382 616 aaPredicted RBP29.04■■■□□ 2.24
CRNDE-209ENST00000560208 VPS37DQ86XT2 251 aa29.04■■■□□ 2.24
CRNDE-209ENST00000560208 UBE2Q2LH0YL09 131 aa29.03■■■□□ 2.24
CRNDE-209ENST00000560208 TTLL12Q14166 644 aaPredicted RBP29.03■■■□□ 2.24
CRNDE-209ENST00000560208 MFSD14BQ5SR56 506 aa29.03■■■□□ 2.24
CRNDE-209ENST00000560208 CASP8AP2Q9UKL3 1982 aa29.02■■■□□ 2.24
CRNDE-209ENST00000560208 AKAP11Q9UKA4 1901 aa29.02■■■□□ 2.24
CRNDE-209ENST00000560208 SPDYE2BA6NHP3 402 aa29.02■■■□□ 2.24
CRNDE-209ENST00000560208 SPDYE6P0CI01 402 aa29.02■■■□□ 2.24
CRNDE-209ENST00000560208 CAVIN4Q5BKX8 364 aa29.02■■■□□ 2.24
CRNDE-209ENST00000560208 RASAL3Q86YV0 1011 aa29.02■■■□□ 2.24
CRNDE-209ENST00000560208 PRMT6Q96LA8 375 aaPredicted RBP29.02■■■□□ 2.24
CRNDE-209ENST00000560208 EYA2O00167 538 aa29.01■■■□□ 2.23
CRNDE-209ENST00000560208 MYO1BO43795 1136 aa29.01■■■□□ 2.23
CRNDE-209ENST00000560208 RBM5P52756 815 aaKnown RBP eCLIP29.01■■■□□ 2.23
CRNDE-209ENST00000560208 PTPN12Q05209 780 aaKnown RBP29.01■■■□□ 2.23
CRNDE-209ENST00000560208 ARHGAP45Q92619 1136 aa29.01■■■□□ 2.23
CRNDE-209ENST00000560208 IQSEC3Q9UPP2 1182 aaPredicted RBP29.01■■■□□ 2.23
CRNDE-209ENST00000560208 DEFB129Q9H1M3 183 aa29■■■□□ 2.23
CRNDE-209ENST00000560208 TTF2Q9UNY4 1162 aaKnown RBP29■■■□□ 2.23
CRNDE-209ENST00000560208 ARAP2Q8WZ64 1704 aa29■■■□□ 2.23
CRNDE-209ENST00000560208 IPO8O15397 1037 aaKnown RBP28.99■■■□□ 2.23
CRNDE-209ENST00000560208 PUM3Q15397 648 aaKnown RBP28.99■■■□□ 2.23
CRNDE-209ENST00000560208 HDAC5Q9UQL6 1122 aa28.99■■■□□ 2.23
CRNDE-209ENST00000560208 LRRFIP2Q9Y608 721 aaKnown RBP28.99■■■□□ 2.23
CRNDE-209ENST00000560208 COL1A1P02452 1464 aaPredicted RBP28.98■■■□□ 2.23
CRNDE-209ENST00000560208 CLRN2A0PK11 232 aa28.98■■■□□ 2.23
CRNDE-209ENST00000560208 FRAT2O75474 233 aaPredicted RBP28.98■■■□□ 2.23
CRNDE-209ENST00000560208 IFIT1P09914 478 aaKnown RBP28.98■■■□□ 2.23
CRNDE-209ENST00000560208 FGFR2P21802 821 aa28.98■■■□□ 2.23
CRNDE-209ENST00000560208 BCAMP50895 628 aa28.98■■■□□ 2.23
CRNDE-209ENST00000560208 CSRNP1Q96S65 589 aa28.98■■■□□ 2.23
CRNDE-209ENST00000560208 TNNQ9UQP3 1299 aa28.98■■■□□ 2.23
CRNDE-209ENST00000560208 CHAF1AQ13111 956 aaPredicted RBP28.97■■■□□ 2.23
CRNDE-209ENST00000560208 PRKG1Q13976 671 aa28.97■■■□□ 2.23
CRNDE-209ENST00000560208 INTS3Q68E01 1043 aaKnown RBP28.97■■■□□ 2.23
CRNDE-209ENST00000560208 ARMC9Q7Z3E5 817 aa28.97■■■□□ 2.23
CRNDE-209ENST00000560208 VEZTQ9HBM0 779 aa28.97■■■□□ 2.23
CRNDE-209ENST00000560208 AOX1Q06278 1338 aa28.96■■■□□ 2.23
CRNDE-209ENST00000560208 ATG9AQ7Z3C6 839 aa28.96■■■□□ 2.23
CRNDE-209ENST00000560208 CLUAP1Q96AJ1 413 aa28.96■■■□□ 2.23
CRNDE-209ENST00000560208 MEIS3Q99687 375 aa28.96■■■□□ 2.23
CRNDE-209ENST00000560208 SERPINA10Q9UK55 444 aa28.96■■■□□ 2.23
CRNDE-209ENST00000560208 TRIM27P14373 513 aa28.95■■■□□ 2.22
CRNDE-209ENST00000560208 ZKSCAN2Q63HK3 967 aa28.95■■■□□ 2.22
CRNDE-209ENST00000560208 ATF7IPQ6VMQ6 1270 aa28.95■■■□□ 2.22
CRNDE-209ENST00000560208 REM2Q8IYK8 340 aaPredicted RBP28.95■■■□□ 2.22
CRNDE-209ENST00000560208 TBC1D22AQ8WUA7 517 aa28.95■■■□□ 2.22
CRNDE-209ENST00000560208 SIL1Q9H173 461 aa28.95■■■□□ 2.22
CRNDE-209ENST00000560208 FBXO3Q9UK99 471 aa28.95■■■□□ 2.22
CRNDE-209ENST00000560208 PPP2R3BQ9Y5P8 575 aa28.95■■■□□ 2.22
CRNDE-209ENST00000560208 RNF186Q9NXI6 227 aa28.94■■■□□ 2.22
CRNDE-209ENST00000560208 SAGE1Q9NXZ1 904 aa28.94■■■□□ 2.22
CRNDE-209ENST00000560208 MYH13Q9UKX3 1938 aa28.93■■■□□ 2.22
CRNDE-209ENST00000560208 CIAO1O76071 339 aa28.93■■■□□ 2.22
CRNDE-209ENST00000560208 SLC5A1P13866 664 aa28.93■■■□□ 2.22
CRNDE-209ENST00000560208 GRIK5Q16478 980 aa28.93■■■□□ 2.22
CRNDE-209ENST00000560208 LPIN2Q92539 896 aa28.93■■■□□ 2.22
CRNDE-209ENST00000560208 RCAN3Q9UKA8 241 aa28.93■■■□□ 2.22
CRNDE-209ENST00000560208 ANGEL1Q9UNK9 670 aaKnown RBP28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms