RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 CHD4Q14839 1912 aa14.73□□□□□ -0.05
HERC1-205ENST00000559886 NMIQ13287 307 aaPredicted RBP14.73□□□□□ -0.05
HERC1-205ENST00000559886 LRRFIP1Q32MZ4 808 aaKnown RBP14.73□□□□□ -0.05
HERC1-205ENST00000559886 KLHL34Q8N239 644 aa14.73□□□□□ -0.05
HERC1-205ENST00000559886 FAM227BQ96M60 508 aa14.73□□□□□ -0.05
HERC1-205ENST00000559886 ZC3H12CQ9C0D7 883 aaKnown RBP14.73□□□□□ -0.05
HERC1-205ENST00000559886 IL25Q9H293 177 aa14.73□□□□□ -0.05
HERC1-205ENST00000559886 CD209Q9NNX6 404 aa14.73□□□□□ -0.05
HERC1-205ENST00000559886 FRAT2O75474 233 aaPredicted RBP14.72□□□□□ -0.05
HERC1-205ENST00000559886 REC8O95072 547 aa14.72□□□□□ -0.05
HERC1-205ENST00000559886 IL1R1P14778 569 aa14.72□□□□□ -0.05
HERC1-205ENST00000559886 EYA3Q99504 573 aa14.72□□□□□ -0.05
HERC1-205ENST00000559886 RNF113AO15541 343 aaKnown RBP14.72□□□□□ -0.05
HERC1-205ENST00000559886 ZFYP08048 801 aaPredicted RBP14.72□□□□□ -0.05
HERC1-205ENST00000559886 WASHC4Q2M389 1173 aa14.72□□□□□ -0.05
HERC1-205ENST00000559886 CCDC93Q567U6 631 aa14.72□□□□□ -0.05
HERC1-205ENST00000559886 DALRD3Q5D0E6 543 aaKnown RBP14.72□□□□□ -0.05
HERC1-205ENST00000559886 RTKN2Q8IZC4 609 aa14.72□□□□□ -0.05
HERC1-205ENST00000559886 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.72□□□□□ -0.055e-7■■■□□ 14.7
HERC1-205ENST00000559886 A0A0D9SFI3 127 aa14.71□□□□□ -0.05
HERC1-205ENST00000559886 RIMBP2O15034 1052 aa14.71□□□□□ -0.05
HERC1-205ENST00000559886 CHGBP05060 677 aa14.71□□□□□ -0.05
HERC1-205ENST00000559886 SOGA3Q5TF21 947 aa14.71□□□□□ -0.05
HERC1-205ENST00000559886 RAD50Q92878 1312 aa14.71□□□□□ -0.05
HERC1-205ENST00000559886 COA1Q9GZY4 146 aa14.71□□□□□ -0.05
HERC1-205ENST00000559886 RBM19Q9Y4C8 960 aaKnown RBP14.71□□□□□ -0.05
HERC1-205ENST00000559886 ZMYM1Q5SVZ6 1142 aa14.71□□□□□ -0.05
HERC1-205ENST00000559886 ZSCAN25Q6NSZ9 544 aa14.71□□□□□ -0.05
HERC1-205ENST00000559886 CCDC88AQ3V6T2 1871 aa14.71□□□□□ -0.06
HERC1-205ENST00000559886 IDH1O75874 414 aaKnown RBP14.7□□□□□ -0.06
HERC1-205ENST00000559886 SUPT20HQ8NEM7 779 aa14.7□□□□□ -0.06
HERC1-205ENST00000559886 FER1L6Q2WGJ9 1857 aa14.7□□□□□ -0.06
HERC1-205ENST00000559886 ARFGEF1Q9Y6D6 1849 aa14.7□□□□□ -0.06
HERC1-205ENST00000559886 ADD2P35612 726 aa14.7□□□□□ -0.06
HERC1-205ENST00000559886 MAP3K12Q12852 859 aa14.7□□□□□ -0.06
HERC1-205ENST00000559886 PSMD1Q99460 953 aa14.7□□□□□ -0.06
HERC1-205ENST00000559886 USP26Q9BXU7 913 aa14.7□□□□□ -0.06
HERC1-205ENST00000559886 HELLSQ9NRZ9 838 aa14.7□□□□□ -0.06
HERC1-205ENST00000559886 SALL1Q9NSC2 1324 aa14.69□□□□□ -0.06
HERC1-205ENST00000559886 SLFNL1Q499Z3 407 aa14.69□□□□□ -0.06
HERC1-205ENST00000559886 SLC9C2Q5TAH2 1124 aa14.69□□□□□ -0.06
HERC1-205ENST00000559886 NLGN2Q8NFZ4 835 aa14.69□□□□□ -0.06
HERC1-205ENST00000559886 WDR66Q8TBY9 1149 aa14.69□□□□□ -0.06
HERC1-205ENST00000559886 TBC1D32Q96NH3 1257 aa14.69□□□□□ -0.06
HERC1-205ENST00000559886 LRP2BPQ9P2M1 347 aa14.69□□□□□ -0.06
HERC1-205ENST00000559886 EPB41L2O43491 1005 aaKnown RBP14.69□□□□□ -0.06
HERC1-205ENST00000559886 CHAF1AQ13111 956 aaPredicted RBP14.69□□□□□ -0.06
HERC1-205ENST00000559886 UBE3CQ15386 1083 aa14.69□□□□□ -0.06
HERC1-205ENST00000559886 MCMDC2Q4G0Z9 681 aa14.69□□□□□ -0.06
HERC1-205ENST00000559886 C22orf23Q9BZE7 217 aa14.69□□□□□ -0.06
HERC1-205ENST00000559886 ABCF2Q9UG63 623 aa14.69□□□□□ -0.06
HERC1-205ENST00000559886 WWC3Q9ULE0 1092 aa14.69□□□□□ -0.06
HERC1-205ENST00000559886 PDE6AP16499 860 aa14.68□□□□□ -0.06
HERC1-205ENST00000559886 APPBP2Q92624 585 aa14.68□□□□□ -0.06
HERC1-205ENST00000559886 SEC62Q99442 399 aaKnown RBP14.68□□□□□ -0.06
HERC1-205ENST00000559886 ANO2Q9NQ90 1003 aa14.68□□□□□ -0.06
HERC1-205ENST00000559886 TCRBV5S4A2TA0A5A2 114 aa14.68□□□□□ -0.06
HERC1-205ENST00000559886 KIAA2012Q0VF49 1180 aa14.68□□□□□ -0.06
HERC1-205ENST00000559886 MAST2Q6P0Q8 1798 aa14.68□□□□□ -0.06
HERC1-205ENST00000559886 FAM205AQ6ZU69 1335 aa14.67□□□□□ -0.06
HERC1-205ENST00000559886 DOK7Q18PE1 504 aa14.67□□□□□ -0.06
HERC1-205ENST00000559886 KIAA1211Q6ZU35 1233 aa14.67□□□□□ -0.06
HERC1-205ENST00000559886 ZNF589Q86UQ0 364 aaPredicted RBP14.67□□□□□ -0.06
HERC1-205ENST00000559886 ZGPATQ8N5A5 531 aaKnown RBP14.67□□□□□ -0.06
HERC1-205ENST00000559886 OSBP2Q969R2 916 aa14.67□□□□□ -0.06
HERC1-205ENST00000559886 FHDC1Q9C0D6 1143 aaPredicted RBP14.67□□□□□ -0.06
HERC1-205ENST00000559886 LSG1Q9H089 658 aaKnown RBP14.67□□□□□ -0.06
HERC1-205ENST00000559886 ZNF532Q9HCE3 1301 aa14.67□□□□□ -0.06
HERC1-205ENST00000559886 IGSF3O75054 1194 aa14.67□□□□□ -0.06
HERC1-205ENST00000559886 RBM25P49756 843 aaKnown RBP14.67□□□□□ -0.06
HERC1-205ENST00000559886 PODNQ7Z5L7 613 aa14.67□□□□□ -0.06
HERC1-205ENST00000559886 MAGEB6Q8N7X4 407 aa14.67□□□□□ -0.06
HERC1-205ENST00000559886 JAG2Q9Y219 1238 aa14.67□□□□□ -0.06
HERC1-205ENST00000559886 SCN9AQ15858 1988 aa14.67□□□□□ -0.06
HERC1-205ENST00000559886 MAST3O60307 1309 aa14.66□□□□□ -0.06
HERC1-205ENST00000559886 G3V3G9 751 aa14.66□□□□□ -0.06
HERC1-205ENST00000559886 AOC3Q16853 763 aa14.66□□□□□ -0.06
HERC1-205ENST00000559886 DCAF8Q5TAQ9 597 aa14.66□□□□□ -0.06
HERC1-205ENST00000559886 SPTY2D1Q68D10 685 aaPredicted RBP14.66□□□□□ -0.06
HERC1-205ENST00000559886 ERICH6Q7L0X2 663 aa14.66□□□□□ -0.06
HERC1-205ENST00000559886 VPS33BQ9H267 617 aa14.66□□□□□ -0.06
HERC1-205ENST00000559886 RAI14Q9P0K7 980 aa14.66□□□□□ -0.06
HERC1-205ENST00000559886 BCS1LQ9Y276 419 aa14.66□□□□□ -0.06
HERC1-205ENST00000559886 CCDC171Q6TFL3 1326 aa14.66□□□□□ -0.06
HERC1-205ENST00000559886 PUS7LQ9H0K6 701 aaKnown RBP14.66□□□□□ -0.06
HERC1-205ENST00000559886 ZNF646O15015 1829 aaPredicted RBP14.66□□□□□ -0.06
HERC1-205ENST00000559886 M0R2C6 588 aa14.65□□□□□ -0.06
HERC1-205ENST00000559886 PPIP5K2O43314 1243 aa14.65□□□□□ -0.06
HERC1-205ENST00000559886 PRDX5P30044 214 aa14.65□□□□□ -0.06
HERC1-205ENST00000559886 TMED8Q6PL24 325 aaPredicted RBP14.65□□□□□ -0.06
HERC1-205ENST00000559886 CCDC129Q6ZRS4 1044 aa14.65□□□□□ -0.06
HERC1-205ENST00000559886 TBC1D22AQ8WUA7 517 aa14.65□□□□□ -0.06
HERC1-205ENST00000559886 DBNDD1Q9H9R9 158 aa14.65□□□□□ -0.06
HERC1-205ENST00000559886 PSME4Q14997 1843 aa14.65□□□□□ -0.06
HERC1-205ENST00000559886 GTF2IP78347 998 aa14.65□□□□□ -0.06
HERC1-205ENST00000559886 PTH1RQ03431 593 aa14.65□□□□□ -0.06
HERC1-205ENST00000559886 ZNF384Q8TF68 577 aa14.65□□□□□ -0.06
HERC1-205ENST00000559886 NSUN4Q96CB9 384 aaKnown RBP14.65□□□□□ -0.06
HERC1-205ENST00000559886 ECE2O60344 883 aa14.64□□□□□ -0.07
HERC1-205ENST00000559886 LDHBP07195 334 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms