RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 KIAA1211Q6ZU35 1233 aa7.13□□□□□ -1.27
SPG11-218ENST00000559754 VN1R5Q7Z5H4 357 aa7.13□□□□□ -1.27
SPG11-218ENST00000559754 Q8N3U1 123 aa7.13□□□□□ -1.27
SPG11-218ENST00000559754 FOXD4L4Q8WXT5 416 aaPredicted RBP7.13□□□□□ -1.27
SPG11-218ENST00000559754 LATS2Q9NRM7 1088 aa7.13□□□□□ -1.27
SPG11-218ENST00000559754 DDX3YO15523 660 aaKnown RBP7.12□□□□□ -1.27
SPG11-218ENST00000559754 DHX15O43143 795 aaKnown RBP7.12□□□□□ -1.27
SPG11-218ENST00000559754 ADAM11O75078 769 aa7.12□□□□□ -1.27
SPG11-218ENST00000559754 NLRP12P59046 1061 aa7.12□□□□□ -1.27
SPG11-218ENST00000559754 ANKRD34AQ69YU3 496 aa7.12□□□□□ -1.27
SPG11-218ENST00000559754 DMRTB1Q96MA1 342 aa7.12□□□□□ -1.27
SPG11-218ENST00000559754 RNF208Q9H0X6 261 aa7.12□□□□□ -1.27
SPG11-218ENST00000559754 DNAJC25Q9H1X3 360 aa7.12□□□□□ -1.27
SPG11-218ENST00000559754 GNEQ9Y223 722 aaKnown RBP7.12□□□□□ -1.27
SPG11-218ENST00000559754 SCO2A0A1W2PP80 73 aa7.11□□□□□ -1.27
SPG11-218ENST00000559754 SOWAHDA6NJG2 315 aa7.11□□□□□ -1.27
SPG11-218ENST00000559754 SOX1O00570 391 aaPredicted RBP7.11□□□□□ -1.27
SPG11-218ENST00000559754 KIAA0319Q5VV43 1072 aa7.11□□□□□ -1.27
SPG11-218ENST00000559754 CCNJLQ8IV13 435 aa7.11□□□□□ -1.27
SPG11-218ENST00000559754 UBASH3BQ8TF42 649 aa7.11□□□□□ -1.27
SPG11-218ENST00000559754 UBL7Q96S82 380 aaPredicted RBP7.11□□□□□ -1.27
SPG11-218ENST00000559754 RUSC1Q9BVN2 902 aa7.11□□□□□ -1.27
SPG11-218ENST00000559754 RBCK1Q9BYM8 510 aa7.11□□□□□ -1.27
SPG11-218ENST00000559754 LIN7BQ9HAP6 207 aa7.11□□□□□ -1.27
SPG11-218ENST00000559754 RAXQ9Y2V3 346 aa7.11□□□□□ -1.27
SPG11-218ENST00000559754 A0A096LPE4 126 aa7.1□□□□□ -1.27
SPG11-218ENST00000559754 A0A1W2PP55 124 aa7.1□□□□□ -1.27
SPG11-218ENST00000559754 A0A1W2PPZ6 126 aa7.1□□□□□ -1.27
SPG11-218ENST00000559754 MEGF11A6BM72 1044 aa7.1□□□□□ -1.27
SPG11-218ENST00000559754 GSC2O15499 205 aa7.1□□□□□ -1.27
SPG11-218ENST00000559754 SART1O43290 800 aaKnown RBP7.1□□□□□ -1.27
SPG11-218ENST00000559754 UTP4Q969X6 686 aaKnown RBP7.1□□□□□ -1.27
SPG11-218ENST00000559754 BIN2Q9UBW5 565 aaPredicted RBP7.1□□□□□ -1.27
SPG11-218ENST00000559754 ESRRAP11474 423 aaPredicted RBP7.09□□□□□ -1.27
SPG11-218ENST00000559754 ORC1Q13415 861 aa7.09□□□□□ -1.27
SPG11-218ENST00000559754 FDX2Q6P4F2 183 aa7.09□□□□□ -1.27
SPG11-218ENST00000559754 ALKBH8Q96BT7 664 aaKnown RBP7.09□□□□□ -1.27
SPG11-218ENST00000559754 FAM46AQ96IP4 442 aaKnown RBP7.09□□□□□ -1.27
SPG11-218ENST00000559754 CLEC4MQ9H2X3 399 aaPredicted RBP7.09□□□□□ -1.27
SPG11-218ENST00000559754 STOML1Q9UBI4 398 aa7.09□□□□□ -1.27
SPG11-218ENST00000559754 EIF1AYO14602 144 aaKnown RBP7.08□□□□□ -1.28
SPG11-218ENST00000559754 FSTP19883 344 aa7.08□□□□□ -1.28
SPG11-218ENST00000559754 USPL1Q5W0Q7 1092 aa7.08□□□□□ -1.28
SPG11-218ENST00000559754 DDX54Q8TDD1 881 aaKnown RBP7.08□□□□□ -1.28
SPG11-218ENST00000559754 MYRFLQ96LU7 910 aa7.08□□□□□ -1.28
SPG11-218ENST00000559754 TCF12Q99081 682 aa7.08□□□□□ -1.28
SPG11-218ENST00000559754 NIF3L1Q9GZT8 377 aa7.08□□□□□ -1.28
SPG11-218ENST00000559754 EHD4Q9H223 541 aa7.08□□□□□ -1.28
SPG11-218ENST00000559754 DCTN4Q9UJW0 460 aa7.08□□□□□ -1.28
SPG11-218ENST00000559754 HIF3AQ9Y2N7 669 aa7.08□□□□□ -1.28
SPG11-218ENST00000559754 METTL12A8MUP2 240 aa7.07□□□□□ -1.28
SPG11-218ENST00000559754 GPR182O15218 404 aa7.07□□□□□ -1.28
SPG11-218ENST00000559754 GSTM4Q03013 218 aa7.07□□□□□ -1.28
SPG11-218ENST00000559754 PCDH1Q08174 1060 aa7.07□□□□□ -1.28
SPG11-218ENST00000559754 HP1BP3Q5SSJ5 553 aaPredicted RBP7.07□□□□□ -1.28
SPG11-218ENST00000559754 XP32Q5T750 250 aa7.07□□□□□ -1.28
SPG11-218ENST00000559754 NUTM2GQ5VZR2 741 aa7.07□□□□□ -1.28
SPG11-218ENST00000559754 HGSNATQ68CP4 663 aa7.07□□□□□ -1.28
SPG11-218ENST00000559754 ARMC10Q8N2F6 343 aa7.07□□□□□ -1.28
SPG11-218ENST00000559754 CCDC74AQ96AQ1 378 aa7.07□□□□□ -1.28
SPG11-218ENST00000559754 CSRNP1Q96S65 589 aa7.07□□□□□ -1.28
SPG11-218ENST00000559754 USP26Q9BXU7 913 aa7.07□□□□□ -1.28
SPG11-218ENST00000559754 ZFYVE1Q9HBF4 777 aa7.07□□□□□ -1.28
SPG11-218ENST00000559754 CYP4F12Q9HCS2 524 aa7.07□□□□□ -1.28
SPG11-218ENST00000559754 NPHS2Q9NP85 383 aa7.07□□□□□ -1.28
SPG11-218ENST00000559754 RNF112Q9ULX5 631 aa7.07□□□□□ -1.28
SPG11-218ENST00000559754 IGHA2P01877 340 aa7.06□□□□□ -1.28
SPG11-218ENST00000559754 GRIA4P48058 902 aa7.06□□□□□ -1.28
SPG11-218ENST00000559754 KCNA1Q09470 495 aa7.06□□□□□ -1.28
SPG11-218ENST00000559754 ARTNQ5T4W7 220 aa7.06□□□□□ -1.28
SPG11-218ENST00000559754 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.06□□□□□ -1.28
SPG11-218ENST00000559754 ZFP64Q9NPA5 681 aa7.06□□□□□ -1.28
SPG11-218ENST00000559754 TRAK1Q9UPV9 953 aa7.06□□□□□ -1.28
SPG11-218ENST00000559754 LOC100289279A0A1B0GTE1 492 aa7.05□□□□□ -1.28
SPG11-218ENST00000559754 GAS2O43903 313 aaKnown RBP7.05□□□□□ -1.28
SPG11-218ENST00000559754 GADD45BO75293 160 aaPredicted RBP7.05□□□□□ -1.28
SPG11-218ENST00000559754 IGLV1-40P01703 118 aa7.05□□□□□ -1.28
SPG11-218ENST00000559754 CYP11A1P05108 521 aa7.05□□□□□ -1.28
SPG11-218ENST00000559754 ITPKAP23677 461 aa7.05□□□□□ -1.28
SPG11-218ENST00000559754 PTPN12Q05209 780 aaKnown RBP7.05□□□□□ -1.28
SPG11-218ENST00000559754 LRP8Q14114 963 aa7.05□□□□□ -1.28
SPG11-218ENST00000559754 EXOSC6Q5RKV6 272 aaKnown RBP7.05□□□□□ -1.28
SPG11-218ENST00000559754 CLEC10AQ8IUN9 316 aa7.05□□□□□ -1.28
SPG11-218ENST00000559754 FAM20CQ8IXL6 584 aa7.05□□□□□ -1.28
SPG11-218ENST00000559754 TMPRSS13Q9BYE2 586 aa7.05□□□□□ -1.28
SPG11-218ENST00000559754 SUGCTQ9HAC7 445 aa7.05□□□□□ -1.28
SPG11-218ENST00000559754 PATL2C9JE40 543 aaKnown RBP7.04□□□□□ -1.28
SPG11-218ENST00000559754 BMP3P12645 472 aa7.04□□□□□ -1.28
SPG11-218ENST00000559754 SPRED3Q2MJR0 410 aa7.04□□□□□ -1.28
SPG11-218ENST00000559754 TMC7Q7Z402 723 aa7.04□□□□□ -1.28
SPG11-218ENST00000559754 C12orf50Q8NA57 414 aaPredicted RBP7.04□□□□□ -1.28
SPG11-218ENST00000559754 SMG8Q8ND04 991 aaKnown RBP7.04□□□□□ -1.28
SPG11-218ENST00000559754 PPP4R2Q9NY27 417 aa7.04□□□□□ -1.28
SPG11-218ENST00000559754 B3GALT4O96024 378 aa7.03□□□□□ -1.28
SPG11-218ENST00000559754 MAPK1P28482 360 aa7.03□□□□□ -1.28
SPG11-218ENST00000559754 PREPP48147 710 aa7.03□□□□□ -1.28
SPG11-218ENST00000559754 ZNF423Q2M1K9 1284 aa7.03□□□□□ -1.28
SPG11-218ENST00000559754 PRPF40BQ6NWY9 871 aaKnown RBP7.03□□□□□ -1.28
SPG11-218ENST00000559754 FAM83CQ9BQN1 747 aa7.03□□□□□ -1.28
SPG11-218ENST00000559754 KCNF1Q9H3M0 494 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms