RNA–Protein interactions for RNA: ENST00000559545.5

CDK12-204, Transcript of cyclin dependent kinase 12, humanhuman

TSL 5

Gene CDK12, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-204ENST00000559545 GRAPLQ8TC17 118 aaPredicted RBP6.88□□□□□ -1.31
CDK12-204ENST00000559545 MORC4Q8TE76 937 aa6.88□□□□□ -1.31
CDK12-204ENST00000559545 RBM17Q96I25 401 aaKnown RBP6.88□□□□□ -1.31
CDK12-204ENST00000559545 SRCIN1Q9C0H9 1055 aa6.88□□□□□ -1.31
CDK12-204ENST00000559545 BSDC1Q9NW68 430 aaPredicted RBP6.88□□□□□ -1.31
CDK12-204ENST00000559545 MAGEC2Q9UBF1 373 aaPredicted RBP6.88□□□□□ -1.31
CDK12-204ENST00000559545 NOB1Q9ULX3 412 aaKnown RBP6.88□□□□□ -1.31
CDK12-204ENST00000559545 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.88□□□□□ -1.31
CDK12-204ENST00000559545 CLEC11AQ9Y240 323 aa6.88□□□□□ -1.31
CDK12-204ENST00000559545 ATP6V0A2Q9Y487 856 aa6.88□□□□□ -1.31
CDK12-204ENST00000559545 hCG_2014768A0A024R1R8 64 aa6.87□□□□□ -1.31
CDK12-204ENST00000559545 TLDC2A0PJX2 215 aa6.87□□□□□ -1.31
CDK12-204ENST00000559545 ZBTB7BO15156 539 aaPredicted RBP6.87□□□□□ -1.31
CDK12-204ENST00000559545 BCAR3O75815 825 aa6.87□□□□□ -1.31
CDK12-204ENST00000559545 PRELPP51888 382 aa6.87□□□□□ -1.31
CDK12-204ENST00000559545 PTGDRQ13258 359 aa6.87□□□□□ -1.31
CDK12-204ENST00000559545 PDE3AQ14432 1141 aa6.87□□□□□ -1.31
CDK12-204ENST00000559545 CWF19L2Q2TBE0 894 aaKnown RBP6.87□□□□□ -1.31
CDK12-204ENST00000559545 TSPYL2Q9H2G4 693 aaPredicted RBP6.87□□□□□ -1.31
CDK12-204ENST00000559545 FAM217BQ9NTX9 383 aaPredicted RBP6.87□□□□□ -1.31
CDK12-204ENST00000559545 CUEDC1Q9NWM3 386 aaPredicted RBP6.87□□□□□ -1.31
CDK12-204ENST00000559545 BIN2Q9UBW5 565 aaPredicted RBP6.87□□□□□ -1.31
CDK12-204ENST00000559545 HDAC5Q9UQL6 1122 aa6.87□□□□□ -1.31
CDK12-204ENST00000559545 NDUFB9Q9Y6M9 179 aa6.87□□□□□ -1.31
CDK12-204ENST00000559545 POLR2AP24928 1970 aaKnown RBP6.87□□□□□ -1.31
CDK12-204ENST00000559545 ZNF646O15015 1829 aaPredicted RBP6.87□□□□□ -1.31
CDK12-204ENST00000559545 SCN4AP35499 1836 aa6.87□□□□□ -1.31
CDK12-204ENST00000559545 IRS2Q9Y4H2 1338 aa6.86□□□□□ -1.31
CDK12-204ENST00000559545 SENP3-EIF4A1A0A087X0R7 540 aa6.86□□□□□ -1.31
CDK12-204ENST00000559545 A0A0U1RQG5 324 aaPredicted RBP6.86□□□□□ -1.31
CDK12-204ENST00000559545 SOWAHDA6NJG2 315 aa6.86□□□□□ -1.31
CDK12-204ENST00000559545 F6X3S4 739 aa6.86□□□□□ -1.31
CDK12-204ENST00000559545 FZD9O00144 591 aa6.86□□□□□ -1.31
CDK12-204ENST00000559545 NFKBIEO00221 500 aa6.86□□□□□ -1.31
CDK12-204ENST00000559545 HCLS1P14317 486 aaPredicted RBP6.86□□□□□ -1.31
CDK12-204ENST00000559545 PTMSP20962 102 aa6.86□□□□□ -1.31
CDK12-204ENST00000559545 GTF2E1P29083 439 aaPredicted RBP6.86□□□□□ -1.31
CDK12-204ENST00000559545 MAP3K9P80192 1104 aa6.86□□□□□ -1.31
CDK12-204ENST00000559545 FKBP4Q02790 459 aaKnown RBP eCLIP6.86□□□□□ -1.31
CDK12-204ENST00000559545 GPR162Q16538 588 aa6.86□□□□□ -1.31
CDK12-204ENST00000559545 CCDC152Q4G0S7 254 aa6.86□□□□□ -1.31
CDK12-204ENST00000559545 PRPF40BQ6NWY9 871 aaKnown RBP6.86□□□□□ -1.31
CDK12-204ENST00000559545 TANGO6Q9C0B7 1094 aa6.86□□□□□ -1.31
CDK12-204ENST00000559545 COL4A1P02462 1669 aa6.86□□□□□ -1.31
CDK12-204ENST00000559545 ZNF609O15014 1411 aa6.85□□□□□ -1.31
CDK12-204ENST00000559545 WDR90Q96KV7 1748 aa6.85□□□□□ -1.31
CDK12-204ENST00000559545 TCERG1O14776 1098 aaKnown RBP6.85□□□□□ -1.31
CDK12-204ENST00000559545 NBPF7P0C2Y1 421 aaPredicted RBP6.85□□□□□ -1.31
CDK12-204ENST00000559545 TRIM27P14373 513 aa6.85□□□□□ -1.31
CDK12-204ENST00000559545 RFX5P48382 616 aaPredicted RBP6.85□□□□□ -1.31
CDK12-204ENST00000559545 MMP14P50281 582 aa6.85□□□□□ -1.31
CDK12-204ENST00000559545 CTSWP56202 376 aa6.85□□□□□ -1.31
CDK12-204ENST00000559545 MCCD1P59942 119 aaPredicted RBP6.85□□□□□ -1.31
CDK12-204ENST00000559545 ANAPC15P60006 121 aa6.85□□□□□ -1.31
CDK12-204ENST00000559545 TSNAXIP1Q2TAA8 658 aa6.85□□□□□ -1.31
CDK12-204ENST00000559545 EPHA10Q5JZY3 1008 aa6.85□□□□□ -1.31
CDK12-204ENST00000559545 ZKSCAN2Q63HK3 967 aa6.85□□□□□ -1.31
CDK12-204ENST00000559545 DDX46Q7L014 1031 aaKnown RBP6.85□□□□□ -1.31
CDK12-204ENST00000559545 NPAS4Q8IUM7 802 aa6.85□□□□□ -1.31
CDK12-204ENST00000559545 ANKRD44Q8N8A2 993 aa6.85□□□□□ -1.31
CDK12-204ENST00000559545 ZNF622Q969S3 477 aaKnown RBP eCLIP6.85□□□□□ -1.31
CDK12-204ENST00000559545 PLCD4Q9BRC7 762 aa6.85□□□□□ -1.31
CDK12-204ENST00000559545 SMC4Q9NTJ3 1288 aa6.85□□□□□ -1.31
CDK12-204ENST00000559545 BCS1LQ9Y276 419 aa6.85□□□□□ -1.31
CDK12-204ENST00000559545 SCN9AQ15858 1988 aa6.84□□□□□ -1.31
CDK12-204ENST00000559545 DUOX1Q9NRD9 1551 aa6.84□□□□□ -1.31
CDK12-204ENST00000559545 MAFGO15525 162 aa6.84□□□□□ -1.31
CDK12-204ENST00000559545 AP1G2O75843 785 aa6.84□□□□□ -1.31
CDK12-204ENST00000559545 LMNB1P20700 586 aa6.84□□□□□ -1.31
CDK12-204ENST00000559545 CCDC93Q567U6 631 aa6.84□□□□□ -1.31
CDK12-204ENST00000559545 NOM1Q5C9Z4 860 aaKnown RBP6.84□□□□□ -1.31
CDK12-204ENST00000559545 ZNF710Q8N1W2 664 aa6.84□□□□□ -1.31
CDK12-204ENST00000559545 CCDC24Q8N4L8 307 aa6.84□□□□□ -1.31
CDK12-204ENST00000559545 SUPT20HQ8NEM7 779 aa6.84□□□□□ -1.31
CDK12-204ENST00000559545 CELF1Q92879 486 aaKnown RBP6.84□□□□□ -1.31
CDK12-204ENST00000559545 DNAJC2Q99543 621 aaKnown RBP6.84□□□□□ -1.31
CDK12-204ENST00000559545 LNPKQ9C0E8 428 aa6.84□□□□□ -1.31
CDK12-204ENST00000559545 COPRSQ9NQ92 184 aa6.84□□□□□ -1.31
CDK12-204ENST00000559545 MINPP1Q9UNW1 487 aa6.84□□□□□ -1.31
CDK12-204ENST00000559545 LEMD3Q9Y2U8 911 aa6.84□□□□□ -1.31
CDK12-204ENST00000559545 POTECB2RU33 542 aa6.83□□□□□ -1.32
CDK12-204ENST00000559545 C21orf2O43822 256 aa6.83□□□□□ -1.32
CDK12-204ENST00000559545 CENPBP07199 599 aaPredicted RBP6.83□□□□□ -1.32
CDK12-204ENST00000559545 GNAI3P08754 354 aa6.83□□□□□ -1.32
CDK12-204ENST00000559545 ATP8B2P98198 1209 aa6.83□□□□□ -1.32
CDK12-204ENST00000559545 KIAA2012Q0VF49 1180 aa6.83□□□□□ -1.32
CDK12-204ENST00000559545 AAMPQ13685 434 aa6.83□□□□□ -1.32
CDK12-204ENST00000559545 ELOAQ14241 798 aaKnown RBP6.83□□□□□ -1.32
CDK12-204ENST00000559545 PTPROQ16827 1216 aa6.83□□□□□ -1.32
CDK12-204ENST00000559545 UBE3BQ7Z3V4 1068 aa6.83□□□□□ -1.32
CDK12-204ENST00000559545 DZIP1LQ8IYY4 767 aaKnown RBP6.83□□□□□ -1.32
CDK12-204ENST00000559545 RPGRQ92834 1020 aaKnown RBP6.83□□□□□ -1.32
CDK12-204ENST00000559545 SUCLG2Q96I99 432 aa6.83□□□□□ -1.32
CDK12-204ENST00000559545 L3MBTL3Q96JM7 780 aaPredicted RBP6.83□□□□□ -1.32
CDK12-204ENST00000559545 MS4A4AQ96JQ5 239 aa6.83□□□□□ -1.32
CDK12-204ENST00000559545 CDC5LQ99459 802 aaKnown RBP6.83□□□□□ -1.32
CDK12-204ENST00000559545 ALG2Q9H553 416 aa6.83□□□□□ -1.32
CDK12-204ENST00000559545 SEC31BQ9NQW1 1179 aa6.83□□□□□ -1.32
CDK12-204ENST00000559545 RCAN3Q9UKA8 241 aa6.83□□□□□ -1.32
CDK12-204ENST00000559545 NOP58Q9Y2X3 529 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms