RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 CDC5LQ99459 802 aaKnown RBP12.62□□□□□ -0.39
SMAD3-211ENST00000559460 ISCA1Q9BUE6 129 aa12.62□□□□□ -0.39
SMAD3-211ENST00000559460 RIPOR2Q9Y4F9 1068 aa12.62□□□□□ -0.39
SMAD3-211ENST00000559460 CSADQ9Y600 493 aa12.62□□□□□ -0.39
SMAD3-211ENST00000559460 ZNF646O15015 1829 aaPredicted RBP12.62□□□□□ -0.39
SMAD3-211ENST00000559460 CLRN2A0PK11 232 aa12.61□□□□□ -0.39
SMAD3-211ENST00000559460 USP2O75604 605 aaPredicted RBP12.61□□□□□ -0.39
SMAD3-211ENST00000559460 FMNL1O95466 1100 aaPredicted RBP12.61□□□□□ -0.39
SMAD3-211ENST00000559460 TNFAIP1Q13829 316 aa12.61□□□□□ -0.39
SMAD3-211ENST00000559460 NFE2L2Q16236 605 aa12.61□□□□□ -0.39
SMAD3-211ENST00000559460 NBPF12Q5TAG4 269 aaPredicted RBP12.61□□□□□ -0.39
SMAD3-211ENST00000559460 UBE2Q1Q7Z7E8 422 aa12.61□□□□□ -0.39
SMAD3-211ENST00000559460 FAM43AQ8N2R8 423 aa12.61□□□□□ -0.39
SMAD3-211ENST00000559460 ZBTB38Q8NAP3 1195 aaPredicted RBP12.61□□□□□ -0.39
SMAD3-211ENST00000559460 MS4A4AQ96JQ5 239 aa12.61□□□□□ -0.39
SMAD3-211ENST00000559460 MTMR10Q9NXD2 777 aa12.61□□□□□ -0.39
SMAD3-211ENST00000559460 SRRDQ9UH36 339 aa12.61□□□□□ -0.39
SMAD3-211ENST00000559460 PDE8AO60658 829 aa12.6□□□□□ -0.39
SMAD3-211ENST00000559460 CAPN2P17655 700 aa12.6□□□□□ -0.39
SMAD3-211ENST00000559460 BMP8BP34820 402 aa12.6□□□□□ -0.39
SMAD3-211ENST00000559460 PSMC4P43686 418 aa12.6□□□□□ -0.39
SMAD3-211ENST00000559460 RBM5P52756 815 aaKnown RBP eCLIP12.6□□□□□ -0.39
SMAD3-211ENST00000559460 GTF2IP78347 998 aa12.6□□□□□ -0.39
SMAD3-211ENST00000559460 PNNQ9H307 717 aaKnown RBP12.6□□□□□ -0.39
SMAD3-211ENST00000559460 MYPNQ86TC9 1320 aa12.6□□□□□ -0.39
SMAD3-211ENST00000559460 COL6A3P12111 3177 aa12.59□□□□□ -0.39
SMAD3-211ENST00000559460 TFRCP02786 760 aaKnown RBP12.59□□□□□ -0.39
SMAD3-211ENST00000559460 CETPP11597 493 aa12.59□□□□□ -0.39
SMAD3-211ENST00000559460 CCT4P50991 539 aaKnown RBP12.59□□□□□ -0.39
SMAD3-211ENST00000559460 LRIT3Q3SXY7 679 aa12.59□□□□□ -0.39
SMAD3-211ENST00000559460 ZBED3Q96IU2 234 aaPredicted RBP12.59□□□□□ -0.39
SMAD3-211ENST00000559460 ZCCHC17Q9NP64 241 aaKnown RBP12.59□□□□□ -0.39
SMAD3-211ENST00000559460 CHPF2Q9P2E5 772 aa12.59□□□□□ -0.39
SMAD3-211ENST00000559460 RPTORQ8N122 1335 aa12.59□□□□□ -0.39
SMAD3-211ENST00000559460 A0A0C4DFX4 3053 aa12.58□□□□□ -0.4
SMAD3-211ENST00000559460 KCNJ4P48050 445 aa12.58□□□□□ -0.4
SMAD3-211ENST00000559460 BCAMP50895 628 aa12.58□□□□□ -0.4
SMAD3-211ENST00000559460 GOLGA2Q08379 1002 aa12.58□□□□□ -0.4
SMAD3-211ENST00000559460 RASA3Q14644 834 aa12.58□□□□□ -0.4
SMAD3-211ENST00000559460 HDGFL1Q5TGJ6 251 aa12.58□□□□□ -0.4
SMAD3-211ENST00000559460 RIC3Q7Z5B4 369 aa12.58□□□□□ -0.4
SMAD3-211ENST00000559460 TDHQ8IZJ6 230 aa12.58□□□□□ -0.4
SMAD3-211ENST00000559460 SLAIN1Q8ND83 568 aa12.58□□□□□ -0.4
SMAD3-211ENST00000559460 BABAM1Q9NWV8 329 aa12.58□□□□□ -0.4
SMAD3-211ENST00000559460 DLG5Q8TDM6 1919 aa12.57□□□□□ -0.4
SMAD3-211ENST00000559460 F8W031 263 aaPredicted RBP12.57□□□□□ -0.4
SMAD3-211ENST00000559460 SGPL1O95470 568 aa12.57□□□□□ -0.4
SMAD3-211ENST00000559460 OSBPP22059 807 aa12.57□□□□□ -0.4
SMAD3-211ENST00000559460 TRIM28Q13263 835 aaKnown RBP12.57□□□□□ -0.4
SMAD3-211ENST00000559460 CFAP100Q494V2 611 aa12.57□□□□□ -0.4
SMAD3-211ENST00000559460 C7orf61Q8IZ16 206 aa12.57□□□□□ -0.4
SMAD3-211ENST00000559460 MTMR14Q8NCE2 650 aa12.57□□□□□ -0.4
SMAD3-211ENST00000559460 GDF15Q99988 308 aa12.57□□□□□ -0.4
SMAD3-211ENST00000559460 DBF4Q9UBU7 674 aaPredicted RBP12.57□□□□□ -0.4
SMAD3-211ENST00000559460 LEMD3Q9Y2U8 911 aa12.57□□□□□ -0.4
SMAD3-211ENST00000559460 SPDYE2BA6NHP3 402 aa12.56□□□□□ -0.4
SMAD3-211ENST00000559460 SPDYE6P0CI01 402 aa12.56□□□□□ -0.4
SMAD3-211ENST00000559460 COL9A1P20849 921 aa12.56□□□□□ -0.4
SMAD3-211ENST00000559460 MAP3K9P80192 1104 aa12.56□□□□□ -0.4
SMAD3-211ENST00000559460 SNAPC2Q13487 334 aa12.56□□□□□ -0.4
SMAD3-211ENST00000559460 VGLL4Q14135 290 aa12.56□□□□□ -0.4
SMAD3-211ENST00000559460 CNKSR2Q8WXI2 1034 aa12.56□□□□□ -0.4
SMAD3-211ENST00000559460 BSDC1Q9NW68 430 aaPredicted RBP12.56□□□□□ -0.4
SMAD3-211ENST00000559460 HYPKQ9NX55 129 aa12.56□□□□□ -0.4
SMAD3-211ENST00000559460 ZMYND8Q9ULU4 1186 aaPredicted RBP12.56□□□□□ -0.4
SMAD3-211ENST00000559460 MINPP1Q9UNW1 487 aa12.56□□□□□ -0.4
SMAD3-211ENST00000559460 IRS2Q9Y4H2 1338 aa12.56□□□□□ -0.4
SMAD3-211ENST00000559460 BTBD19C9JJ37 291 aa12.55□□□□□ -0.4
SMAD3-211ENST00000559460 PCCAP05165 728 aaPredicted RBP12.55□□□□□ -0.4
SMAD3-211ENST00000559460 IGHMBP2P38935 993 aaKnown RBP12.55□□□□□ -0.4
SMAD3-211ENST00000559460 TNNI2P48788 182 aa12.55□□□□□ -0.4
SMAD3-211ENST00000559460 FCGRTP55899 365 aa12.55□□□□□ -0.4
SMAD3-211ENST00000559460 LMOD3Q0VAK6 560 aa12.55□□□□□ -0.4
SMAD3-211ENST00000559460 NECAB2Q7Z6G3 386 aa12.55□□□□□ -0.4
SMAD3-211ENST00000559460 SYMPKQ92797 1274 aaKnown RBP12.55□□□□□ -0.4
SMAD3-211ENST00000559460 UBE2OQ9C0C9 1292 aaKnown RBP12.55□□□□□ -0.4
SMAD3-211ENST00000559460 UNC93B1Q9H1C4 597 aa12.55□□□□□ -0.4
SMAD3-211ENST00000559460 CPA4Q9UI42 421 aa12.55□□□□□ -0.4
SMAD3-211ENST00000559460 RANBP2P49792 3224 aaKnown RBP12.55□□□□□ -0.4
SMAD3-211ENST00000559460 ZSWIM8A7E2V4 1837 aa12.55□□□□□ -0.4
SMAD3-211ENST00000559460 PPP2R1AP30153 589 aa12.54□□□□□ -0.4
SMAD3-211ENST00000559460 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.54□□□□□ -0.4
SMAD3-211ENST00000559460 ANKRD2Q9GZV1 360 aa12.54□□□□□ -0.4
SMAD3-211ENST00000559460 ECM29Q5VYK3 1845 aa12.53□□□□□ -0.4
SMAD3-211ENST00000559460 OTOFQ9HC10 1997 aa12.53□□□□□ -0.4
SMAD3-211ENST00000559460 SPDYE5A6NIY4 337 aa12.53□□□□□ -0.4
SMAD3-211ENST00000559460 CTSWP56202 376 aa12.53□□□□□ -0.4
SMAD3-211ENST00000559460 PRKCZQ05513 592 aa12.53□□□□□ -0.4
SMAD3-211ENST00000559460 C17orf99Q6UX52 265 aa12.53□□□□□ -0.4
SMAD3-211ENST00000559460 TXNRD3Q86VQ6 643 aa12.53□□□□□ -0.4
SMAD3-211ENST00000559460 ERO1BQ86YB8 467 aa12.53□□□□□ -0.4
SMAD3-211ENST00000559460 CCDC191Q8NCU4 936 aa12.53□□□□□ -0.4
SMAD3-211ENST00000559460 PAWRQ96IZ0 340 aaKnown RBP12.53□□□□□ -0.4
SMAD3-211ENST00000559460 DEFB118Q96PH6 123 aa12.53□□□□□ -0.4
SMAD3-211ENST00000559460 MYD88Q99836 296 aa12.53□□□□□ -0.4
SMAD3-211ENST00000559460 CWC25Q9NXE8 425 aaPredicted RBP12.53□□□□□ -0.4
SMAD3-211ENST00000559460 CLSPNQ9HAW4 1339 aa12.53□□□□□ -0.4
SMAD3-211ENST00000559460 SYN1P17600 705 aa12.52□□□□□ -0.41
SMAD3-211ENST00000559460 MAGEA10P43363 369 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-211ENST00000559460 RIPK4P57078 832 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms