RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 ZNF280AP59817 542 aaPredicted RBP23.18■■□□□ 1.3
CASC4-209ENST00000559222 FMR1Q06787 632 aaKnown RBP eCLIP23.18■■□□□ 1.3
CASC4-209ENST00000559222 FSTL1Q12841 308 aa23.18■■□□□ 1.3
CASC4-209ENST00000559222 G3BP1Q13283 466 aaKnown RBP eCLIP23.18■■□□□ 1.3
CASC4-209ENST00000559222 GRIK5Q16478 980 aa23.18■■□□□ 1.3
CASC4-209ENST00000559222 EXOC6BQ9Y2D4 811 aa23.18■■□□□ 1.3
CASC4-209ENST00000559222 FAM205AQ6ZU69 1335 aa23.17■■□□□ 1.3
CASC4-209ENST00000559222 A0A1B0GUL7 405 aa23.17■■□□□ 1.3
CASC4-209ENST00000559222 H7C1D1 291 aa23.17■■□□□ 1.3
CASC4-209ENST00000559222 PHKA1P46020 1223 aa23.17■■□□□ 1.3
CASC4-209ENST00000559222 CHAF1AQ13111 956 aaPredicted RBP23.17■■□□□ 1.3
CASC4-209ENST00000559222 KIAA0825Q8IV33 1275 aa23.17■■□□□ 1.3
CASC4-209ENST00000559222 NOP58Q9Y2X3 529 aaKnown RBP23.17■■□□□ 1.3
CASC4-209ENST00000559222 USP17L8P0C7I0 530 aa23.16■■□□□ 1.3
CASC4-209ENST00000559222 KIF4BQ2VIQ3 1234 aa23.16■■□□□ 1.3
CASC4-209ENST00000559222 CAVIN4Q5BKX8 364 aa23.16■■□□□ 1.3
CASC4-209ENST00000559222 VPS37DQ86XT2 251 aa23.16■■□□□ 1.3
CASC4-209ENST00000559222 PCDHAC2Q9Y5I4 1007 aa23.16■■□□□ 1.3
CASC4-209ENST00000559222 F8W031 263 aaPredicted RBP23.15■■□□□ 1.3
CASC4-209ENST00000559222 HTRA3P83110 453 aa23.15■■□□□ 1.3
CASC4-209ENST00000559222 OS9Q13438 667 aaPredicted RBP23.15■■□□□ 1.3
CASC4-209ENST00000559222 ITGBL1O95965 494 aaPredicted RBP23.14■■□□□ 1.29
CASC4-209ENST00000559222 DLK2Q6UY11 383 aa23.14■■□□□ 1.29
CASC4-209ENST00000559222 XAGE2Q96GT9 111 aa23.14■■□□□ 1.29
CASC4-209ENST00000559222 MYOZ2Q9NPC6 264 aa23.14■■□□□ 1.29
CASC4-209ENST00000559222 MYO3BQ8WXR4 1341 aa23.13■■□□□ 1.29
CASC4-209ENST00000559222 ECM29Q5VYK3 1845 aa23.13■■□□□ 1.29
CASC4-209ENST00000559222 HSPA6P17066 643 aa23.13■■□□□ 1.29
CASC4-209ENST00000559222 MFSD14BQ5SR56 506 aa23.13■■□□□ 1.29
CASC4-209ENST00000559222 CCDC102BQ68D86 513 aa23.13■■□□□ 1.29
CASC4-209ENST00000559222 RPAP2Q8IXW5 612 aaPredicted RBP23.13■■□□□ 1.29
CASC4-209ENST00000559222 AOX1Q06278 1338 aa23.12■■□□□ 1.29
CASC4-209ENST00000559222 TRAF5O00463 557 aa23.12■■□□□ 1.29
CASC4-209ENST00000559222 CNTROBQ8N137 903 aa23.12■■□□□ 1.29
CASC4-209ENST00000559222 NEUROD6Q96NK8 337 aa23.12■■□□□ 1.29
CASC4-209ENST00000559222 TRPM7Q96QT4 1865 aa23.12■■□□□ 1.29
CASC4-209ENST00000559222 TLR7Q9NYK1 1049 aaKnown RBP23.12■■□□□ 1.29
CASC4-209ENST00000559222 SCAF8Q9UPN6 1271 aaKnown RBP23.12■■□□□ 1.29
CASC4-209ENST00000559222 SUPT16HQ9Y5B9 1047 aaKnown RBP23.12■■□□□ 1.29
CASC4-209ENST00000559222 PASKQ96RG2 1323 aa23.11■■□□□ 1.29
CASC4-209ENST00000559222 TNNI3KQ59H18 835 aa23.11■■□□□ 1.29
CASC4-209ENST00000559222 GLIS2Q9BZE0 524 aaPredicted RBP23.11■■□□□ 1.29
CASC4-209ENST00000559222 PGAP2Q9UHJ9 254 aa23.11■■□□□ 1.29
CASC4-209ENST00000559222 AKAP2Q9Y2D5 859 aa23.11■■□□□ 1.29
CASC4-209ENST00000559222 PCDHB15Q9Y5E8 787 aa23.11■■□□□ 1.29
CASC4-209ENST00000559222 FPGT-TNNI3KV9GXZ4 949 aa23.11■■□□□ 1.29
CASC4-209ENST00000559222 AKAP11Q9UKA4 1901 aa23.1■■□□□ 1.29
CASC4-209ENST00000559222 APBB1O00213 710 aa23.1■■□□□ 1.29
CASC4-209ENST00000559222 FRAT2O75474 233 aaPredicted RBP23.1■■□□□ 1.29
CASC4-209ENST00000559222 FKBP1AP62942 108 aaKnown RBP23.1■■□□□ 1.29
CASC4-209ENST00000559222 NBPF9Q3BBW0 867 aa23.1■■□□□ 1.29
CASC4-209ENST00000559222 DBNDD2Q9BQY9 259 aa23.1■■□□□ 1.29
CASC4-209ENST00000559222 CHMP4BQ9H444 224 aaKnown RBP23.1■■□□□ 1.29
CASC4-209ENST00000559222 GGA3Q9NZ52 723 aa23.1■■□□□ 1.29
CASC4-209ENST00000559222 RASGRF1Q13972 1273 aa23.09■■□□□ 1.29
CASC4-209ENST00000559222 SCARF1Q14162 830 aa23.09■■□□□ 1.29
CASC4-209ENST00000559222 ADM5C9JUS6 153 aa23.08■■□□□ 1.29
CASC4-209ENST00000559222 PI16Q6UXB8 463 aa23.08■■□□□ 1.29
CASC4-209ENST00000559222 EAF2Q96CJ1 260 aaPredicted RBP23.08■■□□□ 1.29
CASC4-209ENST00000559222 ZBED3Q96IU2 234 aaPredicted RBP23.08■■□□□ 1.29
CASC4-209ENST00000559222 IL1RAPL2Q9NP60 686 aa23.08■■□□□ 1.29
CASC4-209ENST00000559222 GPR108Q9NPR9 543 aa23.08■■□□□ 1.29
CASC4-209ENST00000559222 MYO5AQ9Y4I1 1855 aaKnown RBP23.08■■□□□ 1.29
CASC4-209ENST00000559222 WNT10BO00744 389 aa23.07■■□□□ 1.28
CASC4-209ENST00000559222 ANGEL2Q5VTE6 544 aaKnown RBP23.07■■□□□ 1.28
CASC4-209ENST00000559222 CCDC8Q9H0W5 538 aaPredicted RBP23.07■■□□□ 1.28
CASC4-209ENST00000559222 DBNLQ9UJU6 430 aaKnown RBP23.07■■□□□ 1.28
CASC4-209ENST00000559222 HMMRO75330 724 aa23.06■■□□□ 1.28
CASC4-209ENST00000559222 USP48Q86UV5 1035 aa23.06■■□□□ 1.28
CASC4-209ENST00000559222 OGFOD1Q8N543 542 aa23.06■■□□□ 1.28
CASC4-209ENST00000559222 RHPN1Q8TCX5 695 aa23.06■■□□□ 1.28
CASC4-209ENST00000559222 ZC3H15Q8WU90 426 aaKnown RBP23.06■■□□□ 1.28
CASC4-209ENST00000559222 TTF2Q9UNY4 1162 aaKnown RBP23.06■■□□□ 1.28
CASC4-209ENST00000559222 APLP1P51693 650 aa23.05■■□□□ 1.28
CASC4-209ENST00000559222 CFAP100Q494V2 611 aa23.05■■□□□ 1.28
CASC4-209ENST00000559222 HDAC9Q9UKV0 1011 aa23.05■■□□□ 1.28
CASC4-209ENST00000559222 PRDX5P30044 214 aa23.04■■□□□ 1.28
CASC4-209ENST00000559222 IRX6P78412 446 aaPredicted RBP23.04■■□□□ 1.28
CASC4-209ENST00000559222 EXOC6Q8TAG9 804 aa23.04■■□□□ 1.28
CASC4-209ENST00000559222 BCL11AQ9H165 835 aa23.04■■□□□ 1.28
CASC4-209ENST00000559222 GNL3LQ9NVN8 582 aaKnown RBP23.04■■□□□ 1.28
CASC4-209ENST00000559222 ARID4AP29374 1257 aaPredicted RBP23.03■■□□□ 1.28
CASC4-209ENST00000559222 MCAMP43121 646 aa23.03■■□□□ 1.28
CASC4-209ENST00000559222 TBC1D22AQ8WUA7 517 aa23.03■■□□□ 1.28
CASC4-209ENST00000559222 PRMT6Q96LA8 375 aaPredicted RBP23.03■■□□□ 1.28
CASC4-209ENST00000559222 HMG20BQ9P0W2 317 aa23.03■■□□□ 1.28
CASC4-209ENST00000559222 DENND2AQ9ULE3 1009 aa23.03■■□□□ 1.28
CASC4-209ENST00000559222 MYH2Q9UKX2 1941 aa23.02■■□□□ 1.28
CASC4-209ENST00000559222 GORABQ5T7V8 394 aa23.02■■□□□ 1.28
CASC4-209ENST00000559222 KRT26Q7Z3Y9 468 aa23.02■■□□□ 1.28
CASC4-209ENST00000559222 AACSQ86V21 672 aa23.02■■□□□ 1.28
CASC4-209ENST00000559222 ERC1Q8IUD2 1116 aa23.02■■□□□ 1.28
CASC4-209ENST00000559222 CLRN2A0PK11 232 aa23.01■■□□□ 1.27
CASC4-209ENST00000559222 SPDYE2BA6NHP3 402 aa23.01■■□□□ 1.27
CASC4-209ENST00000559222 SEMA3EO15041 775 aa23.01■■□□□ 1.27
CASC4-209ENST00000559222 SMARCA5O60264 1052 aaPredicted RBP23.01■■□□□ 1.27
CASC4-209ENST00000559222 SPDYE6P0CI01 402 aa23.01■■□□□ 1.27
CASC4-209ENST00000559222 CRKP46108 304 aa23.01■■□□□ 1.27
CASC4-209ENST00000559222 DLGAP5Q15398 846 aa23.01■■□□□ 1.27
CASC4-209ENST00000559222 CST9Q5W186 159 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms