RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 PRRT3Q5FWE3 981 aa7.77□□□□□ -1.17
CASC4-207ENST00000559037 TRIM11Q96F44 468 aa7.77□□□□□ -1.17
CASC4-207ENST00000559037 DCAF5Q96JK2 942 aa7.77□□□□□ -1.17
CASC4-207ENST00000559037 ELP3Q9H9T3 547 aa7.77□□□□□ -1.17
CASC4-207ENST00000559037 CFDP1Q9UEE9 299 aaPredicted RBP7.77□□□□□ -1.17
CASC4-207ENST00000559037 CCNB3Q8WWL7 1395 aa7.76□□□□□ -1.17
CASC4-207ENST00000559037 SUPT6HQ7KZ85 1726 aaKnown RBP7.76□□□□□ -1.17
CASC4-207ENST00000559037 LOC102724428A0A0B4J2F2 783 aa7.76□□□□□ -1.17
CASC4-207ENST00000559037 IGHA1P01876 353 aa7.76□□□□□ -1.17
CASC4-207ENST00000559037 CPB1P15086 417 aa7.76□□□□□ -1.17
CASC4-207ENST00000559037 SERPINB4P48594 390 aa7.76□□□□□ -1.17
CASC4-207ENST00000559037 SIK1P57059 783 aa7.76□□□□□ -1.17
CASC4-207ENST00000559037 MLECQ14165 292 aa7.76□□□□□ -1.17
CASC4-207ENST00000559037 SPACA7Q96KW9 195 aa7.76□□□□□ -1.17
CASC4-207ENST00000559037 LPIN3Q9BQK8 851 aa7.76□□□□□ -1.17
CASC4-207ENST00000559037 TRAIPQ9BWF2 469 aa7.76□□□□□ -1.17
CASC4-207ENST00000559037 AGLP35573 1532 aa7.76□□□□□ -1.17
CASC4-207ENST00000559037 EHBP1L1Q8N3D4 1523 aa7.76□□□□□ -1.17
CASC4-207ENST00000559037 TIAM1Q13009 1591 aa7.76□□□□□ -1.17
CASC4-207ENST00000559037 SYCP2Q9BX26 1530 aa7.75□□□□□ -1.17
CASC4-207ENST00000559037 ZBTB42B2RXF5 422 aa7.75□□□□□ -1.17
CASC4-207ENST00000559037 NDUFB5O43674 189 aa7.75□□□□□ -1.17
CASC4-207ENST00000559037 FZD6O60353 706 aa7.75□□□□□ -1.17
CASC4-207ENST00000559037 KIF4AO95239 1232 aa7.75□□□□□ -1.17
CASC4-207ENST00000559037 EIF2AK2P19525 551 aaKnown RBP7.75□□□□□ -1.17
CASC4-207ENST00000559037 COL8A1P27658 744 aa7.75□□□□□ -1.17
CASC4-207ENST00000559037 KCNA1Q09470 495 aa7.75□□□□□ -1.17
CASC4-207ENST00000559037 COL9A3Q14050 684 aaPredicted RBP7.75□□□□□ -1.17
CASC4-207ENST00000559037 PERM1Q5SV97 790 aa7.75□□□□□ -1.17
CASC4-207ENST00000559037 GJD3Q8N144 294 aa7.75□□□□□ -1.17
CASC4-207ENST00000559037 CITED4Q96RK1 184 aa7.75□□□□□ -1.17
CASC4-207ENST00000559037 PLVAPQ9BX97 442 aa7.75□□□□□ -1.17
CASC4-207ENST00000559037 POLIQ9UNA4 740 aa7.75□□□□□ -1.17
CASC4-207ENST00000559037 ZNF644Q9H582 1327 aaPredicted RBP7.75□□□□□ -1.17
CASC4-207ENST00000559037 PLEKHH2Q8IVE3 1493 aa7.75□□□□□ -1.17
CASC4-207ENST00000559037 C3P01024 1663 aa7.74□□□□□ -1.17
CASC4-207ENST00000559037 ADGBQ8N7X0 1667 aa7.74□□□□□ -1.17
CASC4-207ENST00000559037 AFF1P51825 1210 aaKnown RBP7.74□□□□□ -1.17
CASC4-207ENST00000559037 C8orf34Q49A92 452 aa7.74□□□□□ -1.17
CASC4-207ENST00000559037 DTWD1Q8N5C7 304 aa7.74□□□□□ -1.17
CASC4-207ENST00000559037 DCAF11Q8TEB1 546 aa7.74□□□□□ -1.17
CASC4-207ENST00000559037 SNX29Q8TEQ0 813 aa7.74□□□□□ -1.17
CASC4-207ENST00000559037 BRPF3Q9ULD4 1205 aa7.74□□□□□ -1.17
CASC4-207ENST00000559037 VPS8Q8N3P4 1428 aa7.74□□□□□ -1.17
CASC4-207ENST00000559037 SPAG9O60271 1321 aaKnown RBP7.74□□□□□ -1.17
CASC4-207ENST00000559037 NCOA2Q15596 1464 aa7.74□□□□□ -1.17
CASC4-207ENST00000559037 LMTK3Q96Q04 1460 aa7.74□□□□□ -1.17
CASC4-207ENST00000559037 MBD5Q9P267 1494 aa7.74□□□□□ -1.17
CASC4-207ENST00000559037 CFAP65Q6ZU64 1925 aaKnown RBP7.74□□□□□ -1.17
CASC4-207ENST00000559037 MAP3K1Q13233 1512 aa7.73□□□□□ -1.17
CASC4-207ENST00000559037 INO80Q9ULG1 1556 aaPredicted RBP7.73□□□□□ -1.17
CASC4-207ENST00000559037 NEFLP07196 543 aa7.73□□□□□ -1.17
CASC4-207ENST00000559037 CEBPAP49715 358 aaPredicted RBP7.73□□□□□ -1.17
CASC4-207ENST00000559037 RAC1P63000 192 aa7.73□□□□□ -1.17
CASC4-207ENST00000559037 MLLT1Q03111 559 aaPredicted RBP7.73□□□□□ -1.17
CASC4-207ENST00000559037 PDE3BQ13370 1112 aa7.73□□□□□ -1.17
CASC4-207ENST00000559037 NUDT8Q8WV74 236 aa7.73□□□□□ -1.17
CASC4-207ENST00000559037 PLD4Q96BZ4 506 aa7.73□□□□□ -1.17
CASC4-207ENST00000559037 NSUN5Q96P11 429 aaKnown RBP7.73□□□□□ -1.17
CASC4-207ENST00000559037 NACC1Q96RE7 527 aa7.73□□□□□ -1.17
CASC4-207ENST00000559037 SUV39H2Q9H5I1 410 aa7.73□□□□□ -1.17
CASC4-207ENST00000559037 SRA1Q9HD15 236 aaKnown RBP7.73□□□□□ -1.17
CASC4-207ENST00000559037 ANO2Q9NQ90 1003 aa7.73□□□□□ -1.17
CASC4-207ENST00000559037 PREX1Q8TCU6 1659 aa7.73□□□□□ -1.17
CASC4-207ENST00000559037 ATP7AQ04656 1500 aa7.73□□□□□ -1.17
CASC4-207ENST00000559037 TRIM28Q13263 835 aaKnown RBP7.72□□□□□ -1.17
CASC4-207ENST00000559037 KCTD17Q8N5Z5 321 aa7.72□□□□□ -1.17
CASC4-207ENST00000559037 SMG9Q9H0W8 520 aaKnown RBP7.72□□□□□ -1.17
CASC4-207ENST00000559037 MUC3BQ9H195 1237 aa7.72□□□□□ -1.17
CASC4-207ENST00000559037 GGNBP2Q9H3C7 697 aa7.72□□□□□ -1.17
CASC4-207ENST00000559037 TMEM63CQ9P1W3 806 aa7.72□□□□□ -1.17
CASC4-207ENST00000559037 LRRC9Q6ZRR7 1453 aa7.72□□□□□ -1.17
CASC4-207ENST00000559037 MROH2AA6NES4 1674 aa7.71□□□□□ -1.18
CASC4-207ENST00000559037 SOWAHDA6NJG2 315 aa7.71□□□□□ -1.18
CASC4-207ENST00000559037 SMNDC1O75940 238 aaKnown RBP eCLIP7.71□□□□□ -1.18
CASC4-207ENST00000559037 CES1P23141 567 aa7.71□□□□□ -1.18
CASC4-207ENST00000559037 ARHGAP4P98171 946 aa7.71□□□□□ -1.18
CASC4-207ENST00000559037 TRAPPC3LQ5T215 181 aa7.71□□□□□ -1.18
CASC4-207ENST00000559037 MSL1Q68DK7 614 aa7.71□□□□□ -1.18
CASC4-207ENST00000559037 C8orf86Q6ZUL3 223 aa7.71□□□□□ -1.18
CASC4-207ENST00000559037 MAP4K3Q8IVH8 894 aa7.71□□□□□ -1.18
CASC4-207ENST00000559037 STRCQ7RTU9 1775 aa7.71□□□□□ -1.18
CASC4-207ENST00000559037 RTEL1-TNFRSF6BF6WH68 1400 aa7.7□□□□□ -1.18
CASC4-207ENST00000559037 TNFRSF21O75509 655 aa7.7□□□□□ -1.18
CASC4-207ENST00000559037 ELNP15502 786 aa7.7□□□□□ -1.18
CASC4-207ENST00000559037 HSPA2P54652 639 aa7.7□□□□□ -1.18
CASC4-207ENST00000559037 GRIK5Q16478 980 aa7.7□□□□□ -1.18
CASC4-207ENST00000559037 ECM1Q16610 540 aa7.7□□□□□ -1.18
CASC4-207ENST00000559037 HFE2Q6ZVN8 426 aa7.7□□□□□ -1.18
CASC4-207ENST00000559037 ILDR2Q71H61 639 aa7.7□□□□□ -1.18
CASC4-207ENST00000559037 NCAPG2Q86XI2 1143 aa7.7□□□□□ -1.18
CASC4-207ENST00000559037 WFDC8Q8IUA0 241 aa7.7□□□□□ -1.18
CASC4-207ENST00000559037 PLXNC1O60486 1568 aa7.7□□□□□ -1.18
CASC4-207ENST00000559037 A2MP01023 1474 aa7.69□□□□□ -1.18
CASC4-207ENST00000559037 ARHGEF5Q12774 1597 aa7.69□□□□□ -1.18
CASC4-207ENST00000559037 A0A0A0MRY4 1105 aa7.69□□□□□ -1.18
CASC4-207ENST00000559037 PHACTR2O75167 634 aa7.69□□□□□ -1.18
CASC4-207ENST00000559037 APBA3O96018 575 aa7.69□□□□□ -1.18
CASC4-207ENST00000559037 EDN3P14138 238 aa7.69□□□□□ -1.18
CASC4-207ENST00000559037 PLA2G4EQ3MJ16 856 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms