RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 PPP1R37O75864 691 aa15.1■□□□□ 0.01
TPM1-216ENST00000558910 KLHDC4Q8TBB5 520 aa15.1■□□□□ 0.01
TPM1-216ENST00000558910 KAZALD1Q96I82 304 aa15.1■□□□□ 0.01
TPM1-216ENST00000558910 ANKRD2Q9GZV1 360 aa15.1■□□□□ 0.01
TPM1-216ENST00000558910 ADARB2Q9NS39 739 aaKnown RBP15.1■□□□□ 0.01
TPM1-216ENST00000558910 MKRN1Q9UHC7 482 aaKnown RBP15.1■□□□□ 0.01
TPM1-216ENST00000558910 JAG2Q9Y219 1238 aa15.1■□□□□ 0.01
TPM1-216ENST00000558910 ZNF804BA4D1E1 1349 aa15.1■□□□□ 0.01
TPM1-216ENST00000558910 SCN4AP35499 1836 aa15.09■□□□□ 0.01
TPM1-216ENST00000558910 TRAF5O00463 557 aa15.09■□□□□ 0.01
TPM1-216ENST00000558910 DLK2Q6UY11 383 aa15.09■□□□□ 0.01
TPM1-216ENST00000558910 USP44Q9H0E7 712 aa15.09■□□□□ 0.01
TPM1-216ENST00000558910 ZNF408Q9H9D4 720 aa15.09■□□□□ 0.01
TPM1-216ENST00000558910 EGFRP00533 1210 aa15.08■□□□□ 0
TPM1-216ENST00000558910 HIRAP54198 1017 aaPredicted RBP15.08■□□□□ 0
TPM1-216ENST00000558910 GRM1Q13255 1194 aa15.08■□□□□ 0
TPM1-216ENST00000558910 USP50Q70EL3 339 aaPredicted RBP15.08■□□□□ 0
TPM1-216ENST00000558910 ANKRD44Q8N8A2 993 aa15.08■□□□□ 0
TPM1-216ENST00000558910 API5Q9BZZ5 524 aaKnown RBP15.08■□□□□ 0
TPM1-216ENST00000558910 CT47B1P0C2W7 299 aaPredicted RBP15.07■□□□□ 0
TPM1-216ENST00000558910 LRRC24Q50LG9 513 aa15.07■□□□□ 0
TPM1-216ENST00000558910 PAXIP1Q6ZW49 1069 aaPredicted RBP15.07■□□□□ 0
TPM1-216ENST00000558910 GLIS2Q9BZE0 524 aaPredicted RBP15.07■□□□□ 0
TPM1-216ENST00000558910 LEMD3Q9Y2U8 911 aa15.07■□□□□ 0
TPM1-216ENST00000558910 USP17L3A6NCW0 530 aa15.06■□□□□ 0
TPM1-216ENST00000558910 USP17L4A6NCW7 530 aa15.06■□□□□ 0
TPM1-216ENST00000558910 ITGBL1O95965 494 aaPredicted RBP15.06■□□□□ 0
TPM1-216ENST00000558910 UBTFL1P0CB47 393 aaPredicted RBP15.06■□□□□ 0
TPM1-216ENST00000558910 USP17L1Q7RTZ2 530 aa15.06■□□□□ 0
TPM1-216ENST00000558910 DNAJC5GQ8N7S2 189 aa15.06■□□□□ 0
TPM1-216ENST00000558910 SIL1Q9H173 461 aa15.06■□□□□ 0
TPM1-216ENST00000558910 SCAF8Q9UPN6 1271 aaKnown RBP15.06■□□□□ 0
TPM1-216ENST00000558910 VIL1P09327 827 aaKnown RBP15.05■□□□□ -0
TPM1-216ENST00000558910 GTF2IP78347 998 aa15.05■□□□□ -0
TPM1-216ENST00000558910 RSBN1LQ6PCB5 846 aaPredicted RBP15.05■□□□□ -0
TPM1-216ENST00000558910 USP48Q86UV5 1035 aa15.05■□□□□ -0
TPM1-216ENST00000558910 KLRG1Q96E93 195 aa15.05■□□□□ -0
TPM1-216ENST00000558910 ABT1Q9ULW3 272 aaKnown RBP15.05■□□□□ -0
TPM1-216ENST00000558910 LRRFIP2Q9Y608 721 aaKnown RBP15.05■□□□□ -0
TPM1-216ENST00000558910 ASTN2O75129 1339 aaPredicted RBP15.05■□□□□ -0
TPM1-216ENST00000558910 MED23Q9ULK4 1368 aa15.05■□□□□ -0
TPM1-216ENST00000558910 UTYO14607 1347 aa15.04■□□□□ -0
TPM1-216ENST00000558910 KIF16BQ96L93 1317 aa15.04■□□□□ -0
TPM1-216ENST00000558910 F8W031 263 aaPredicted RBP15.04■□□□□ -0
TPM1-216ENST00000558910 KIF4BQ2VIQ3 1234 aa15.04■□□□□ -0
TPM1-216ENST00000558910 METTL24Q5JXM2 366 aa15.04■□□□□ -0
TPM1-216ENST00000558910 PODNQ7Z5L7 613 aa15.04■□□□□ -0
TPM1-216ENST00000558910 MEIS3Q99687 375 aa15.04■□□□□ -0
TPM1-216ENST00000558910 SCN9AQ15858 1988 aa15.04■□□□□ -0
TPM1-216ENST00000558910 PASKQ96RG2 1323 aa15.03■□□□□ -0
TPM1-216ENST00000558910 TMEM88BA6NKF7 163 aa15.03■□□□□ -0
TPM1-216ENST00000558910 TRIM27P14373 513 aa15.03■□□□□ -0
TPM1-216ENST00000558910 GYG1P46976 350 aa15.03■□□□□ -0
TPM1-216ENST00000558910 TTLL5Q6EMB2 1281 aa15.03■□□□□ -0
TPM1-216ENST00000558910 DPF2Q92785 391 aa15.03■□□□□ -0
TPM1-216ENST00000558910 COA1Q9GZY4 146 aa15.03■□□□□ -0
TPM1-216ENST00000558910 RTN4Q9NQC3 1192 aaKnown RBP15.03■□□□□ -0
TPM1-216ENST00000558910 IQSEC3Q9UPP2 1182 aaPredicted RBP15.03■□□□□ -0
TPM1-216ENST00000558910 ZBED9Q6R2W3 1325 aa15.02■□□□□ -0
TPM1-216ENST00000558910 ADM5C9JUS6 153 aa15.02■□□□□ -0
TPM1-216ENST00000558910 IPO8O15397 1037 aaKnown RBP15.02■□□□□ -0
TPM1-216ENST00000558910 CELF2O95319 508 aaKnown RBP15.02■□□□□ -0
TPM1-216ENST00000558910 SLC34A2O95436 690 aa15.02■□□□□ -0
TPM1-216ENST00000558910 HOXB3P14651 431 aaPredicted RBP15.02■□□□□ -0
TPM1-216ENST00000558910 RPS12P25398 132 aaKnown RBP15.02■□□□□ -0
TPM1-216ENST00000558910 KIAA0825Q8IV33 1275 aa15.02■□□□□ -0
TPM1-216ENST00000558910 CD209Q9NNX6 404 aa15.02■□□□□ -0
TPM1-216ENST00000558910 PA2G4Q9UQ80 394 aaKnown RBP15.02■□□□□ -0
TPM1-216ENST00000558910 USP17L8P0C7I0 530 aa15.01□□□□□ -0.01
TPM1-216ENST00000558910 SCARF1Q14162 830 aa15.01□□□□□ -0.01
TPM1-216ENST00000558910 RABL6Q3YEC7 729 aaPredicted RBP15.01□□□□□ -0.01
TPM1-216ENST00000558910 ATF7IPQ6VMQ6 1270 aa15.01□□□□□ -0.01
TPM1-216ENST00000558910 ZNF804AQ7Z570 1209 aa15.01□□□□□ -0.01
TPM1-216ENST00000558910 GGA3Q9NZ52 723 aa15.01□□□□□ -0.01
TPM1-216ENST00000558910 CHAF1AQ13111 956 aaPredicted RBP15□□□□□ -0.01
TPM1-216ENST00000558910 DACT2Q5SW24 774 aa15□□□□□ -0.01
TPM1-216ENST00000558910 ZKSCAN2Q63HK3 967 aa15□□□□□ -0.01
TPM1-216ENST00000558910 KRT26Q7Z3Y9 468 aa15□□□□□ -0.01
TPM1-216ENST00000558910 VPS37DQ86XT2 251 aa15□□□□□ -0.01
TPM1-216ENST00000558910 TMEM57Q8N5G2 664 aa15□□□□□ -0.01
TPM1-216ENST00000558910 AGBL3Q8NEM8 1001 aa15□□□□□ -0.01
TPM1-216ENST00000558910 DCPSQ96C86 337 aaKnown RBP15□□□□□ -0.01
TPM1-216ENST00000558910 YTHDC1Q96MU7 727 aaKnown RBP15□□□□□ -0.01
TPM1-216ENST00000558910 MYOZ2Q9NPC6 264 aa15□□□□□ -0.01
TPM1-216ENST00000558910 ZBTB4Q9P1Z0 1013 aaPredicted RBP15□□□□□ -0.01
TPM1-216ENST00000558910 RIPOR2Q9Y4F9 1068 aa15□□□□□ -0.01
TPM1-216ENST00000558910 PCNTO95613 3336 aa14.99□□□□□ -0.01
TPM1-216ENST00000558910 ADAMTSL1Q8N6G6 1762 aa14.99□□□□□ -0.01
TPM1-216ENST00000558910 FRAT2O75474 233 aaPredicted RBP14.99□□□□□ -0.01
TPM1-216ENST00000558910 SASH1O94885 1247 aa14.99□□□□□ -0.01
TPM1-216ENST00000558910 STRIP1Q5VSL9 837 aa14.99□□□□□ -0.01
TPM1-216ENST00000558910 ANGEL2Q5VTE6 544 aaKnown RBP14.99□□□□□ -0.01
TPM1-216ENST00000558910 FTSJ3Q8IY81 847 aaKnown RBP14.99□□□□□ -0.01
TPM1-216ENST00000558910 C1orf115Q9H7X2 142 aa14.99□□□□□ -0.01
TPM1-216ENST00000558910 MROH5Q6ZUA9 1318 aa14.98□□□□□ -0.01
TPM1-216ENST00000558910 HIBADHP31937 336 aaKnown RBP14.98□□□□□ -0.01
TPM1-216ENST00000558910 VEGFBP49765 207 aa14.98□□□□□ -0.01
TPM1-216ENST00000558910 BRPF1P55201 1214 aaPredicted RBP14.98□□□□□ -0.01
TPM1-216ENST00000558910 NBPF9Q3BBW0 867 aa14.98□□□□□ -0.01
TPM1-216ENST00000558910 PRAMEF18Q5VWM3 479 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms