RNA–Protein interactions for RNA: ENST00000558845.1

HMG20A-206, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 644 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-206ENST00000558845 MCAMP43121 646 aa13.57□□□□□ -0.24
HMG20A-206ENST00000558845 KCNJ4P48050 445 aa13.57□□□□□ -0.24
HMG20A-206ENST00000558845 GPSM2P81274 684 aa13.57□□□□□ -0.24
HMG20A-206ENST00000558845 TTF1Q15361 905 aaPredicted RBP13.57□□□□□ -0.24
HMG20A-206ENST00000558845 LRRFIP1Q32MZ4 808 aaKnown RBP13.57□□□□□ -0.24
HMG20A-206ENST00000558845 C7orf43Q8WVR3 580 aa13.57□□□□□ -0.24
HMG20A-206ENST00000558845 FAM84BQ96KN1 310 aaPredicted RBP13.57□□□□□ -0.24
HMG20A-206ENST00000558845 PLSCR2Q9NRY7 297 aa13.57□□□□□ -0.24
HMG20A-206ENST00000558845 GNL3LQ9NVN8 582 aaKnown RBP13.57□□□□□ -0.24
HMG20A-206ENST00000558845 GGA1Q9UJY5 639 aa13.57□□□□□ -0.24
HMG20A-206ENST00000558845 CD2APQ9Y5K6 639 aa13.57□□□□□ -0.24
HMG20A-206ENST00000558845 RAD50Q92878 1312 aa13.57□□□□□ -0.24
HMG20A-206ENST00000558845 SNAP23O00161 211 aa13.56□□□□□ -0.24
HMG20A-206ENST00000558845 PTGER2P43116 358 aa13.56□□□□□ -0.24
HMG20A-206ENST00000558845 SCARF1Q14162 830 aa13.56□□□□□ -0.24
HMG20A-206ENST00000558845 NBR1Q14596 966 aa13.56□□□□□ -0.24
HMG20A-206ENST00000558845 PRPF40BQ6NWY9 871 aaKnown RBP13.56□□□□□ -0.24
HMG20A-206ENST00000558845 RUFY2Q8WXA3 655 aa13.56□□□□□ -0.24
HMG20A-206ENST00000558845 ESYT1Q9BSJ8 1104 aa13.56□□□□□ -0.24
HMG20A-206ENST00000558845 UPF2Q9HAU5 1272 aaKnown RBP13.56□□□□□ -0.24
HMG20A-206ENST00000558845 ANKIB1Q9P2G1 1089 aa13.56□□□□□ -0.24
HMG20A-206ENST00000558845 DUOX1Q9NRD9 1551 aa13.56□□□□□ -0.24
HMG20A-206ENST00000558845 REC8O95072 547 aa13.55□□□□□ -0.24
HMG20A-206ENST00000558845 SEC24BO95487 1268 aa13.55□□□□□ -0.24
HMG20A-206ENST00000558845 ZFYP08048 801 aaPredicted RBP13.55□□□□□ -0.24
HMG20A-206ENST00000558845 KCNA3P22001 575 aa13.55□□□□□ -0.24
HMG20A-206ENST00000558845 HIBADHP31937 336 aaKnown RBP13.55□□□□□ -0.24
HMG20A-206ENST00000558845 BCAMP50895 628 aa13.55□□□□□ -0.24
HMG20A-206ENST00000558845 ATN1P54259 1190 aaPredicted RBP13.55□□□□□ -0.24
HMG20A-206ENST00000558845 RASGRF1Q13972 1273 aa13.55□□□□□ -0.24
HMG20A-206ENST00000558845 TMED8Q6PL24 325 aaPredicted RBP13.55□□□□□ -0.24
HMG20A-206ENST00000558845 SPATA5Q8NB90 893 aa13.55□□□□□ -0.24
HMG20A-206ENST00000558845 TBC1D16Q8TBP0 767 aa13.55□□□□□ -0.24
HMG20A-206ENST00000558845 ZNF622Q969S3 477 aaKnown RBP eCLIP13.55□□□□□ -0.24
HMG20A-206ENST00000558845 DNAJC2Q99543 621 aaKnown RBP13.55□□□□□ -0.24
HMG20A-206ENST00000558845 FSD1Q9BTV5 496 aa13.55□□□□□ -0.24
HMG20A-206ENST00000558845 RTFDC1Q9BY42 306 aaPredicted RBP13.55□□□□□ -0.24
HMG20A-206ENST00000558845 TMX4Q9H1E5 349 aaPredicted RBP13.55□□□□□ -0.24
HMG20A-206ENST00000558845 HMG20BQ9P0W2 317 aa13.55□□□□□ -0.24
HMG20A-206ENST00000558845 DENND2AQ9ULE3 1009 aa13.55□□□□□ -0.24
HMG20A-206ENST00000558845 NSFL1CQ9UNZ2 370 aaKnown RBP13.55□□□□□ -0.24
HMG20A-206ENST00000558845 POTEMA6NI47 508 aa13.54□□□□□ -0.24
HMG20A-206ENST00000558845 GOLIM4O00461 696 aa13.54□□□□□ -0.24
HMG20A-206ENST00000558845 SGSM2O43147 1006 aa13.54□□□□□ -0.24
HMG20A-206ENST00000558845 MAP4K4O95819 1239 aaPredicted RBP13.54□□□□□ -0.24
HMG20A-206ENST00000558845 CHRNA5P30532 468 aa13.54□□□□□ -0.24
HMG20A-206ENST00000558845 ZAP70P43403 619 aa13.54□□□□□ -0.24
HMG20A-206ENST00000558845 MPNDQ8N594 471 aa13.54□□□□□ -0.24
HMG20A-206ENST00000558845 TTLL6Q8N841 843 aa13.54□□□□□ -0.24
HMG20A-206ENST00000558845 DIAPH3Q9NSV4 1193 aa13.54□□□□□ -0.24
HMG20A-206ENST00000558845 SLX4Q8IY92 1834 aa13.54□□□□□ -0.24
HMG20A-206ENST00000558845 DOCK2Q92608 1830 aa13.53□□□□□ -0.24
HMG20A-206ENST00000558845 UFL1O94874 794 aa13.53□□□□□ -0.24
HMG20A-206ENST00000558845 CYP2E1P05181 493 aaPredicted RBP13.53□□□□□ -0.24
HMG20A-206ENST00000558845 GYG1P46976 350 aa13.53□□□□□ -0.24
HMG20A-206ENST00000558845 FKBP4Q02790 459 aaKnown RBP eCLIP13.53□□□□□ -0.24
HMG20A-206ENST00000558845 SOGA3Q5TF21 947 aa13.53□□□□□ -0.24
HMG20A-206ENST00000558845 PAXIP1Q6ZW49 1069 aaPredicted RBP13.53□□□□□ -0.24
HMG20A-206ENST00000558845 ZNF804AQ7Z570 1209 aa13.53□□□□□ -0.24
HMG20A-206ENST00000558845 TDRD7Q8NHU6 1098 aaKnown RBP13.53□□□□□ -0.24
HMG20A-206ENST00000558845 EDC3Q96F86 508 aaKnown RBP13.53□□□□□ -0.24
HMG20A-206ENST00000558845 POLLQ9UGP5 575 aa13.53□□□□□ -0.24
HMG20A-206ENST00000558845 SALL1Q9NSC2 1324 aa13.53□□□□□ -0.24
HMG20A-206ENST00000558845 PSDA5PKW4 1024 aaPredicted RBP13.52□□□□□ -0.25
HMG20A-206ENST00000558845 WTIPA6NIX2 430 aaPredicted RBP13.52□□□□□ -0.25
HMG20A-206ENST00000558845 IL1R1P14778 569 aa13.52□□□□□ -0.25
HMG20A-206ENST00000558845 DPEP1P16444 411 aa13.52□□□□□ -0.25
HMG20A-206ENST00000558845 KLRK1P26718 216 aa13.52□□□□□ -0.25
HMG20A-206ENST00000558845 RBM25P49756 843 aaKnown RBP13.52□□□□□ -0.25
HMG20A-206ENST00000558845 ZSCAN25Q6NSZ9 544 aa13.52□□□□□ -0.25
HMG20A-206ENST00000558845 DPP8Q6V1X1 898 aaPredicted RBP13.52□□□□□ -0.25
HMG20A-206ENST00000558845 TXNRD3Q86VQ6 643 aa13.52□□□□□ -0.25
HMG20A-206ENST00000558845 VPS37DQ86XT2 251 aa13.52□□□□□ -0.25
HMG20A-206ENST00000558845 TBC1D32Q96NH3 1257 aa13.52□□□□□ -0.25
HMG20A-206ENST00000558845 EYA3Q99504 573 aa13.52□□□□□ -0.25
HMG20A-206ENST00000558845 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.52□□□□□ -0.25
HMG20A-206ENST00000558845 ANTXR1Q9H6X2 564 aa13.52□□□□□ -0.25
HMG20A-206ENST00000558845 SPON1Q9HCB6 807 aa13.52□□□□□ -0.25
HMG20A-206ENST00000558845 HELLSQ9NRZ9 838 aa13.52□□□□□ -0.25
HMG20A-206ENST00000558845 RBM19Q9Y4C8 960 aaKnown RBP13.52□□□□□ -0.25
HMG20A-206ENST00000558845 COL1A1P02452 1464 aaPredicted RBP13.52□□□□□ -0.25
HMG20A-206ENST00000558845 BRCA1P38398 1863 aaKnown RBP13.52□□□□□ -0.25
HMG20A-206ENST00000558845 MFAP1P55081 439 aaKnown RBP13.51□□□□□ -0.25
HMG20A-206ENST00000558845 UBE3CQ15386 1083 aa13.51□□□□□ -0.25
HMG20A-206ENST00000558845 ZMYM1Q5SVZ6 1142 aa13.51□□□□□ -0.25
HMG20A-206ENST00000558845 SUPT20HQ8NEM7 779 aa13.51□□□□□ -0.25
HMG20A-206ENST00000558845 COA1Q9GZY4 146 aa13.51□□□□□ -0.25
HMG20A-206ENST00000558845 VPS33BQ9H267 617 aa13.51□□□□□ -0.25
HMG20A-206ENST00000558845 PIM2Q9P1W9 311 aa13.51□□□□□ -0.25
HMG20A-206ENST00000558845 RNF113AO15541 343 aaKnown RBP13.5□□□□□ -0.25
HMG20A-206ENST00000558845 NMIQ13287 307 aaPredicted RBP13.5□□□□□ -0.25
HMG20A-206ENST00000558845 CCDC93Q567U6 631 aa13.5□□□□□ -0.25
HMG20A-206ENST00000558845 POTEGQ6S5H5 508 aa13.5□□□□□ -0.25
HMG20A-206ENST00000558845 PI16Q6UXB8 463 aa13.5□□□□□ -0.25
HMG20A-206ENST00000558845 MAMSTRQ6ZN01 415 aa13.5□□□□□ -0.25
HMG20A-206ENST00000558845 SLC51AQ86UW1 340 aa13.5□□□□□ -0.25
HMG20A-206ENST00000558845 RTKN2Q8IZC4 609 aa13.5□□□□□ -0.25
HMG20A-206ENST00000558845 ZGPATQ8N5A5 531 aaKnown RBP13.5□□□□□ -0.25
HMG20A-206ENST00000558845 IL17RAQ96F46 866 aa13.5□□□□□ -0.25
HMG20A-206ENST00000558845 PSMD1Q99460 953 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms