RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 USP17L4A6NCW7 530 aa10.23□□□□□ -0.77
TRAF3-205ENST00000558700 CASP7P55210 303 aa10.23□□□□□ -0.77
TRAF3-205ENST00000558700 RBM26Q5T8P6 1007 aaKnown RBP10.23□□□□□ -0.77
TRAF3-205ENST00000558700 USP17L1Q7RTZ2 530 aa10.23□□□□□ -0.77
TRAF3-205ENST00000558700 SULF1Q8IWU6 871 aa10.23□□□□□ -0.77
TRAF3-205ENST00000558700 MPHOSPH8Q99549 860 aa10.23□□□□□ -0.77
TRAF3-205ENST00000558700 ANKRD2Q9GZV1 360 aa10.23□□□□□ -0.77
TRAF3-205ENST00000558700 ARAP2Q8WZ64 1704 aa10.23□□□□□ -0.77
TRAF3-205ENST00000558700 MYO3BQ8WXR4 1341 aa10.23□□□□□ -0.77
TRAF3-205ENST00000558700 ECM29Q5VYK3 1845 aa10.22□□□□□ -0.77
TRAF3-205ENST00000558700 ANKRD18BA2A2Z9 1011 aa10.22□□□□□ -0.77
TRAF3-205ENST00000558700 EGFRP00533 1210 aa10.22□□□□□ -0.77
TRAF3-205ENST00000558700 HSPA8P11142 646 aaKnown RBP10.22□□□□□ -0.77
TRAF3-205ENST00000558700 MAP2K2P36507 400 aa10.22□□□□□ -0.77
TRAF3-205ENST00000558700 KCNJ4P48050 445 aa10.22□□□□□ -0.77
TRAF3-205ENST00000558700 LBX1P52954 281 aa10.22□□□□□ -0.77
TRAF3-205ENST00000558700 ZNF280AP59817 542 aaPredicted RBP10.22□□□□□ -0.77
TRAF3-205ENST00000558700 USP48Q86UV5 1035 aa10.22□□□□□ -0.77
TRAF3-205ENST00000558700 COA1Q9GZY4 146 aa10.22□□□□□ -0.77
TRAF3-205ENST00000558700 GBA2Q9HCG7 927 aaPredicted RBP10.22□□□□□ -0.77
TRAF3-205ENST00000558700 LEMD3Q9Y2U8 911 aa10.22□□□□□ -0.77
TRAF3-205ENST00000558700 ZNF804BA4D1E1 1349 aa10.22□□□□□ -0.77
TRAF3-205ENST00000558700 PITPNM2Q9BZ72 1349 aa10.22□□□□□ -0.77
TRAF3-205ENST00000558700 ADM5C9JUS6 153 aa10.21□□□□□ -0.77
TRAF3-205ENST00000558700 F6X3S4 739 aa10.21□□□□□ -0.77
TRAF3-205ENST00000558700 GRM8O00222 908 aa10.21□□□□□ -0.77
TRAF3-205ENST00000558700 CA12O43570 354 aa10.21□□□□□ -0.77
TRAF3-205ENST00000558700 AOC2O75106 756 aa10.21□□□□□ -0.77
TRAF3-205ENST00000558700 CSF1RP07333 972 aa10.21□□□□□ -0.77
TRAF3-205ENST00000558700 USP17L8P0C7I0 530 aa10.21□□□□□ -0.77
TRAF3-205ENST00000558700 HUNKP57058 714 aa10.21□□□□□ -0.77
TRAF3-205ENST00000558700 NOGQ13253 232 aa10.21□□□□□ -0.77
TRAF3-205ENST00000558700 IFIT5Q13325 482 aaKnown RBP10.21□□□□□ -0.77
TRAF3-205ENST00000558700 BEND3Q5T5X7 828 aa10.21□□□□□ -0.77
TRAF3-205ENST00000558700 C2orf69Q8N8R5 385 aa10.21□□□□□ -0.77
TRAF3-205ENST00000558700 FBXW7Q969H0 707 aa10.21□□□□□ -0.77
TRAF3-205ENST00000558700 CHMP3Q9Y3E7 222 aa10.21□□□□□ -0.77
TRAF3-205ENST00000558700 ZNF521Q96K83 1311 aa10.21□□□□□ -0.78
TRAF3-205ENST00000558700 ALDH1L1O75891 902 aa10.2□□□□□ -0.78
TRAF3-205ENST00000558700 CD44P16070 742 aaKnown RBP10.2□□□□□ -0.78
TRAF3-205ENST00000558700 CHRNDQ07001 517 aa10.2□□□□□ -0.78
TRAF3-205ENST00000558700 PPP1R15BQ5SWA1 713 aa10.2□□□□□ -0.78
TRAF3-205ENST00000558700 STRIP1Q5VSL9 837 aa10.2□□□□□ -0.78
TRAF3-205ENST00000558700 ANGEL2Q5VTE6 544 aaKnown RBP10.2□□□□□ -0.78
TRAF3-205ENST00000558700 OGFOD1Q8N543 542 aa10.2□□□□□ -0.78
TRAF3-205ENST00000558700 GMLQ99445 158 aa10.2□□□□□ -0.78
TRAF3-205ENST00000558700 MYOZ2Q9NPC6 264 aa10.2□□□□□ -0.78
TRAF3-205ENST00000558700 C9orf78Q9NZ63 289 aaPredicted RBP10.2□□□□□ -0.78
TRAF3-205ENST00000558700 COL1A1P02452 1464 aaPredicted RBP10.19□□□□□ -0.78
TRAF3-205ENST00000558700 MMP14P50281 582 aa10.19□□□□□ -0.78
TRAF3-205ENST00000558700 TAF7LQ5H9L4 462 aa10.19□□□□□ -0.78
TRAF3-205ENST00000558700 DACT2Q5SW24 774 aa10.19□□□□□ -0.78
TRAF3-205ENST00000558700 CDCA5Q96FF9 252 aa10.19□□□□□ -0.78
TRAF3-205ENST00000558700 SRCIN1Q9C0H9 1055 aa10.19□□□□□ -0.78
TRAF3-205ENST00000558700 ASTN2O75129 1339 aaPredicted RBP10.18□□□□□ -0.78
TRAF3-205ENST00000558700 AKAP11Q9UKA4 1901 aa10.18□□□□□ -0.78
TRAF3-205ENST00000558700 SPDYE16A6NNV3 312 aaPredicted RBP10.18□□□□□ -0.78
TRAF3-205ENST00000558700 E9PSI1 815 aa10.18□□□□□ -0.78
TRAF3-205ENST00000558700 KLRK1P26718 216 aa10.18□□□□□ -0.78
TRAF3-205ENST00000558700 FKBP1BP68106 108 aa10.18□□□□□ -0.78
TRAF3-205ENST00000558700 FOXO4P98177 505 aa10.18□□□□□ -0.78
TRAF3-205ENST00000558700 SCARF1Q14162 830 aa10.18□□□□□ -0.78
TRAF3-205ENST00000558700 CCDC57Q2TAC2 916 aa10.18□□□□□ -0.78
TRAF3-205ENST00000558700 RGMBQ6NW40 437 aa10.18□□□□□ -0.78
TRAF3-205ENST00000558700 SLC4A10Q6U841 1118 aa10.18□□□□□ -0.78
TRAF3-205ENST00000558700 LMBR1LQ6UX01 489 aa10.18□□□□□ -0.78
TRAF3-205ENST00000558700 ZNF804AQ7Z570 1209 aa10.18□□□□□ -0.78
TRAF3-205ENST00000558700 TXNRD3Q86VQ6 643 aa10.18□□□□□ -0.78
TRAF3-205ENST00000558700 CCDC102AQ96A19 550 aa10.18□□□□□ -0.78
TRAF3-205ENST00000558700 HDAC9Q9UKV0 1011 aa10.18□□□□□ -0.78
TRAF3-205ENST00000558700 PTPRCP08575 1304 aa10.17□□□□□ -0.78
TRAF3-205ENST00000558700 WTIPA6NIX2 430 aaPredicted RBP10.17□□□□□ -0.78
TRAF3-205ENST00000558700 MLLT3P42568 568 aaPredicted RBP10.17□□□□□ -0.78
TRAF3-205ENST00000558700 DLK2Q6UY11 383 aa10.17□□□□□ -0.78
TRAF3-205ENST00000558700 C15orf52Q6ZUT6 534 aaKnown RBP10.17□□□□□ -0.78
TRAF3-205ENST00000558700 PHF12Q96QT6 1004 aa10.17□□□□□ -0.78
TRAF3-205ENST00000558700 IRS2Q9Y4H2 1338 aa10.16□□□□□ -0.78
TRAF3-205ENST00000558700 SLC10A3P09131 477 aa10.16□□□□□ -0.78
TRAF3-205ENST00000558700 NF2P35240 595 aa10.16□□□□□ -0.78
TRAF3-205ENST00000558700 ZNF157P51786 506 aaPredicted RBP10.16□□□□□ -0.78
TRAF3-205ENST00000558700 GTF2IP78347 998 aa10.16□□□□□ -0.78
TRAF3-205ENST00000558700 EPHA10Q5JZY3 1008 aa10.16□□□□□ -0.78
TRAF3-205ENST00000558700 TTLL5Q6EMB2 1281 aa10.16□□□□□ -0.78
TRAF3-205ENST00000558700 LDHAL6AQ6ZMR3 332 aa10.16□□□□□ -0.78
TRAF3-205ENST00000558700 APOBEC3FQ8IUX4 373 aaKnown RBP10.16□□□□□ -0.78
TRAF3-205ENST00000558700 MXD3Q9BW11 206 aa10.16□□□□□ -0.78
TRAF3-205ENST00000558700 GPHNQ9NQX3 736 aaPredicted RBP10.16□□□□□ -0.78
TRAF3-205ENST00000558700 CNNM1Q9NRU3 951 aa10.16□□□□□ -0.78
TRAF3-205ENST00000558700 MYH13Q9UKX3 1938 aa10.15□□□□□ -0.78
TRAF3-205ENST00000558700 UTYO14607 1347 aa10.15□□□□□ -0.78
TRAF3-205ENST00000558700 FAM155AB1AL88 458 aaPredicted RBP10.15□□□□□ -0.78
TRAF3-205ENST00000558700 WNT10BO00744 389 aa10.15□□□□□ -0.78
TRAF3-205ENST00000558700 TAF5LO75529 589 aa10.15□□□□□ -0.78
TRAF3-205ENST00000558700 SASH1O94885 1247 aa10.15□□□□□ -0.78
TRAF3-205ENST00000558700 NBPF9Q3BBW0 867 aa10.15□□□□□ -0.78
TRAF3-205ENST00000558700 KIAA0825Q8IV33 1275 aa10.15□□□□□ -0.78
TRAF3-205ENST00000558700 PIP4P2Q8N4L2 257 aa10.15□□□□□ -0.78
TRAF3-205ENST00000558700 IL27Q8NEV9 243 aa10.15□□□□□ -0.78
TRAF3-205ENST00000558700 HELBQ8NG08 1087 aaPredicted RBP10.15□□□□□ -0.78
TRAF3-205ENST00000558700 SUCLG2Q96I99 432 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms