RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 SREK1Q8WXA9 508 aaKnown RBP5.03□□□□□ -1.6
ZEB1-212ENST00000558655 CWC25Q9NXE8 425 aaPredicted RBP5.03□□□□□ -1.6
ZEB1-212ENST00000558655 KLHL42Q9P2K6 505 aa5.03□□□□□ -1.6
ZEB1-212ENST00000558655 IVNS1ABPQ9Y6Y0 642 aa5.03□□□□□ -1.6
ZEB1-212ENST00000558655 IQCA1LA6NCM1 817 aa5.03□□□□□ -1.6
ZEB1-212ENST00000558655 F6X3S4 739 aa5.03□□□□□ -1.6
ZEB1-212ENST00000558655 GRM8O00222 908 aa5.03□□□□□ -1.6
ZEB1-212ENST00000558655 ITGB8P26012 769 aa5.03□□□□□ -1.6
ZEB1-212ENST00000558655 RFC4P35249 363 aa5.03□□□□□ -1.6
ZEB1-212ENST00000558655 PIP4K2AP48426 406 aaPredicted RBP5.03□□□□□ -1.6
ZEB1-212ENST00000558655 RGS3P49796 1198 aa5.03□□□□□ -1.6
ZEB1-212ENST00000558655 NLGN1Q8N2Q7 840 aa5.03□□□□□ -1.6
ZEB1-212ENST00000558655 ZBTB38Q8NAP3 1195 aaPredicted RBP5.03□□□□□ -1.6
ZEB1-212ENST00000558655 FRAT1Q92837 279 aaPredicted RBP5.03□□□□□ -1.6
ZEB1-212ENST00000558655 VTI1AQ96AJ9 217 aa5.03□□□□□ -1.6
ZEB1-212ENST00000558655 MYD88Q99836 296 aa5.03□□□□□ -1.6
ZEB1-212ENST00000558655 NYXQ9GZU5 481 aa5.03□□□□□ -1.6
ZEB1-212ENST00000558655 NOP58Q9Y2X3 529 aaKnown RBP5.03□□□□□ -1.6
ZEB1-212ENST00000558655 RPS6KL1Q9Y6S9 549 aa5.03□□□□□ -1.6
ZEB1-212ENST00000558655 CACNA1SQ13698 1873 aa5.02□□□□□ -1.61
ZEB1-212ENST00000558655 KLRG2A4D1S0 409 aaPredicted RBP5.02□□□□□ -1.61
ZEB1-212ENST00000558655 TRIM66O15016 1216 aa5.02□□□□□ -1.61
ZEB1-212ENST00000558655 ZPR1O75312 459 aa5.02□□□□□ -1.61
ZEB1-212ENST00000558655 PPFIA4O75335 1185 aa5.02□□□□□ -1.61
ZEB1-212ENST00000558655 USPL1Q5W0Q7 1092 aa5.02□□□□□ -1.61
ZEB1-212ENST00000558655 ZBTB3Q9H5J0 574 aa5.02□□□□□ -1.61
ZEB1-212ENST00000558655 TBC1D2BQ9UPU7 963 aa5.02□□□□□ -1.61
ZEB1-212ENST00000558655 RBM47A0AV96 593 aaKnown RBP5.02□□□□□ -1.61
ZEB1-212ENST00000558655 POLRMTO00411 1230 aaKnown RBP5.02□□□□□ -1.61
ZEB1-212ENST00000558655 CSF1RP07333 972 aa5.02□□□□□ -1.61
ZEB1-212ENST00000558655 AIMP1Q12904 312 aaKnown RBP5.02□□□□□ -1.61
ZEB1-212ENST00000558655 HDAC1Q13547 482 aaPredicted RBP5.02□□□□□ -1.61
ZEB1-212ENST00000558655 TBC1D9BQ66K14 1250 aa5.02□□□□□ -1.61
ZEB1-212ENST00000558655 SND1Q7KZF4 910 aaKnown RBP eCLIP5.02□□□□□ -1.61
ZEB1-212ENST00000558655 PPP1R42Q7Z4L9 355 aa5.02□□□□□ -1.61
ZEB1-212ENST00000558655 GPATCH3Q96I76 525 aa5.02□□□□□ -1.61
ZEB1-212ENST00000558655 KAZALD1Q96I82 304 aa5.02□□□□□ -1.61
ZEB1-212ENST00000558655 TFCP2L1Q9NZI6 479 aa5.02□□□□□ -1.61
ZEB1-212ENST00000558655 SRP68Q9UHB9 627 aaKnown RBP5.02□□□□□ -1.61
ZEB1-212ENST00000558655 PDZRN3Q9UPQ7 1066 aa5.02□□□□□ -1.61
ZEB1-212ENST00000558655 PSME4Q14997 1843 aa5.02□□□□□ -1.61
ZEB1-212ENST00000558655 TAF1P21675 1872 aa5.01□□□□□ -1.61
ZEB1-212ENST00000558655 ZNF646O15015 1829 aaPredicted RBP5.01□□□□□ -1.61
ZEB1-212ENST00000558655 NFIXQ14938 502 aa5.01□□□□□ -1.61
ZEB1-212ENST00000558655 SKIV2LQ15477 1246 aaKnown RBP5.01□□□□□ -1.61
ZEB1-212ENST00000558655 RPAP2Q8IXW5 612 aaPredicted RBP5.01□□□□□ -1.61
ZEB1-212ENST00000558655 ANKRD44Q8N8A2 993 aa5.01□□□□□ -1.61
ZEB1-212ENST00000558655 UTP14AQ9BVJ6 771 aaKnown RBP5.01□□□□□ -1.61
ZEB1-212ENST00000558655 RYDENQ9NUL5 291 aaKnown RBP5.01□□□□□ -1.61
ZEB1-212ENST00000558655 HPS5Q9UPZ3 1129 aa5.01□□□□□ -1.61
ZEB1-212ENST00000558655 COG6Q9Y2V7 657 aa5.01□□□□□ -1.61
ZEB1-212ENST00000558655 SH3TC1Q8TE82 1336 aa5.01□□□□□ -1.61
ZEB1-212ENST00000558655 ST18O60284 1047 aa5.01□□□□□ -1.61
ZEB1-212ENST00000558655 GNAI2P04899 355 aa5.01□□□□□ -1.61
ZEB1-212ENST00000558655 PDE4AP27815 886 aa5.01□□□□□ -1.61
ZEB1-212ENST00000558655 BMP8BP34820 402 aa5.01□□□□□ -1.61
ZEB1-212ENST00000558655 FOXO4P98177 505 aa5.01□□□□□ -1.61
ZEB1-212ENST00000558655 DDR1Q08345 913 aa5.01□□□□□ -1.61
ZEB1-212ENST00000558655 KCTD2Q14681 263 aa5.01□□□□□ -1.61
ZEB1-212ENST00000558655 ACAP1Q15027 740 aa5.01□□□□□ -1.61
ZEB1-212ENST00000558655 SF3B3Q15393 1217 aaKnown RBP5.01□□□□□ -1.61
ZEB1-212ENST00000558655 CWF19L2Q2TBE0 894 aaKnown RBP5.01□□□□□ -1.61
ZEB1-212ENST00000558655 SUSD4Q5VX71 490 aa5.01□□□□□ -1.61
ZEB1-212ENST00000558655 FBXO46Q6PJ61 603 aaPredicted RBP5.01□□□□□ -1.61
ZEB1-212ENST00000558655 ITPRIPQ8IWB1 547 aa5.01□□□□□ -1.61
ZEB1-212ENST00000558655 MEIS3Q99687 375 aa5.01□□□□□ -1.61
ZEB1-212ENST00000558655 ABCC12Q96J65 1359 aa5.01□□□□□ -1.61
ZEB1-212ENST00000558655 FER1L6Q2WGJ9 1857 aa5.01□□□□□ -1.61
ZEB1-212ENST00000558655 RPTORQ8N122 1335 aa5□□□□□ -1.61
ZEB1-212ENST00000558655 COL4A1P02462 1669 aa5□□□□□ -1.61
ZEB1-212ENST00000558655 ANP32AP39687 249 aaKnown RBP5□□□□□ -1.61
ZEB1-212ENST00000558655 ATP8B2P98198 1209 aa5□□□□□ -1.61
ZEB1-212ENST00000558655 CRY2Q49AN0 593 aa5□□□□□ -1.61
ZEB1-212ENST00000558655 SSH3Q8TE77 659 aa5□□□□□ -1.61
ZEB1-212ENST00000558655 SETDB2Q96T68 719 aa5□□□□□ -1.61
ZEB1-212ENST00000558655 BMP2KQ9NSY1 1161 aaPredicted RBP5□□□□□ -1.61
ZEB1-212ENST00000558655 NIP7Q9Y221 180 aaKnown RBP eCLIP5□□□□□ -1.61
ZEB1-212ENST00000558655 MYH13Q9UKX3 1938 aa5□□□□□ -1.61
ZEB1-212ENST00000558655 PDE8AO60658 829 aa5□□□□□ -1.61
ZEB1-212ENST00000558655 NBPF7P0C2Y1 421 aaPredicted RBP5□□□□□ -1.61
ZEB1-212ENST00000558655 UBTFL1P0CB47 393 aaPredicted RBP5□□□□□ -1.61
ZEB1-212ENST00000558655 HOXA10P31260 410 aaPredicted RBP5□□□□□ -1.61
ZEB1-212ENST00000558655 ATN1P54259 1190 aaPredicted RBP5□□□□□ -1.61
ZEB1-212ENST00000558655 KCNA1Q09470 495 aa5□□□□□ -1.61
ZEB1-212ENST00000558655 DPY19L2Q6NUT2 758 aa5□□□□□ -1.61
ZEB1-212ENST00000558655 CEP85Q6P2H3 762 aa5□□□□□ -1.61
ZEB1-212ENST00000558655 RFX5P48382 616 aaPredicted RBP4.99□□□□□ -1.61
ZEB1-212ENST00000558655 PRR5LQ6MZQ0 368 aa4.99□□□□□ -1.61
ZEB1-212ENST00000558655 SLC4A10Q6U841 1118 aa4.99□□□□□ -1.61
ZEB1-212ENST00000558655 TPTE2Q6XPS3 522 aa4.99□□□□□ -1.61
ZEB1-212ENST00000558655 SUCLG2Q96I99 432 aa4.99□□□□□ -1.61
ZEB1-212ENST00000558655 DUOX1Q9NRD9 1551 aa4.99□□□□□ -1.61
ZEB1-212ENST00000558655 SLX4Q8IY92 1834 aa4.99□□□□□ -1.61
ZEB1-212ENST00000558655 SNED1Q8TER0 1413 aa4.99□□□□□ -1.61
ZEB1-212ENST00000558655 ATP5J2-PTCD1G3V325 749 aa4.99□□□□□ -1.61
ZEB1-212ENST00000558655 PHF14O94880 888 aa4.99□□□□□ -1.61
ZEB1-212ENST00000558655 SERPINB2P05120 415 aa4.99□□□□□ -1.61
ZEB1-212ENST00000558655 PAX3P23760 479 aa4.99□□□□□ -1.61
ZEB1-212ENST00000558655 CTSWP56202 376 aa4.99□□□□□ -1.61
ZEB1-212ENST00000558655 SIRT2Q8IXJ6 389 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms