RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 MAP2K2P36507 400 aa19.41■□□□□ 0.7
CSHL1-208ENST00000558609 METTL24Q5JXM2 366 aa19.41■□□□□ 0.7
CSHL1-208ENST00000558609 INTS3Q68E01 1043 aaKnown RBP19.41■□□□□ 0.7
CSHL1-208ENST00000558609 VGLL2Q8N8G2 317 aa19.41■□□□□ 0.7
CSHL1-208ENST00000558609 C2orf69Q8N8R5 385 aa19.41■□□□□ 0.7
CSHL1-208ENST00000558609 TDRD7Q8NHU6 1098 aaKnown RBP19.41■□□□□ 0.7
CSHL1-208ENST00000558609 KLHDC4Q8TBB5 520 aa19.41■□□□□ 0.7
CSHL1-208ENST00000558609 CDCA5Q96FF9 252 aa19.41■□□□□ 0.7
CSHL1-208ENST00000558609 ZBED3Q96IU2 234 aaPredicted RBP19.41■□□□□ 0.7
CSHL1-208ENST00000558609 IPO8O15397 1037 aaKnown RBP19.4■□□□□ 0.7
CSHL1-208ENST00000558609 PDE8BO95263 885 aa19.4■□□□□ 0.7
CSHL1-208ENST00000558609 GYG1P46976 350 aa19.4■□□□□ 0.7
CSHL1-208ENST00000558609 HUNKP57058 714 aa19.4■□□□□ 0.7
CSHL1-208ENST00000558609 FAM205AQ6ZU69 1335 aa19.4■□□□□ 0.7
CSHL1-208ENST00000558609 THSD7BQ9C0I4 1608 aa19.4■□□□□ 0.7
CSHL1-208ENST00000558609 PTPN12Q05209 780 aaKnown RBP19.39■□□□□ 0.69
CSHL1-208ENST00000558609 GRM1Q13255 1194 aa19.39■□□□□ 0.69
CSHL1-208ENST00000558609 FBXO33Q7Z6M2 555 aa19.39■□□□□ 0.69
CSHL1-208ENST00000558609 MTMR14Q8NCE2 650 aa19.39■□□□□ 0.69
CSHL1-208ENST00000558609 EYA2O00167 538 aa19.38■□□□□ 0.69
CSHL1-208ENST00000558609 BCAR3O75815 825 aa19.38■□□□□ 0.69
CSHL1-208ENST00000558609 TSKSQ9UJT2 592 aa19.38■□□□□ 0.69
CSHL1-208ENST00000558609 AOC2O75106 756 aa19.37■□□□□ 0.69
CSHL1-208ENST00000558609 DLGAP5Q15398 846 aa19.37■□□□□ 0.69
CSHL1-208ENST00000558609 ATF7IPQ6VMQ6 1270 aa19.37■□□□□ 0.69
CSHL1-208ENST00000558609 MEIS3Q99687 375 aa19.37■□□□□ 0.69
CSHL1-208ENST00000558609 FBXO3Q9UK99 471 aa19.37■□□□□ 0.69
CSHL1-208ENST00000558609 LRRFIP2Q9Y608 721 aaKnown RBP19.37■□□□□ 0.69
CSHL1-208ENST00000558609 CCDC85CA6NKD9 419 aa19.36■□□□□ 0.69
CSHL1-208ENST00000558609 TRIM27P14373 513 aa19.36■□□□□ 0.69
CSHL1-208ENST00000558609 FGFR2P21802 821 aa19.36■□□□□ 0.69
CSHL1-208ENST00000558609 FKBP1BP68106 108 aa19.36■□□□□ 0.69
CSHL1-208ENST00000558609 CAVIN4Q5BKX8 364 aa19.36■□□□□ 0.69
CSHL1-208ENST00000558609 RGMBQ6NW40 437 aa19.36■□□□□ 0.69
CSHL1-208ENST00000558609 SCAF8Q9UPN6 1271 aaKnown RBP19.36■□□□□ 0.69
CSHL1-208ENST00000558609 JAG2Q9Y219 1238 aa19.36■□□□□ 0.69
CSHL1-208ENST00000558609 CIAO1O76071 339 aa19.35■□□□□ 0.69
CSHL1-208ENST00000558609 GNAI3P08754 354 aa19.35■□□□□ 0.69
CSHL1-208ENST00000558609 RGS19P49795 217 aa19.35■□□□□ 0.69
CSHL1-208ENST00000558609 NOGQ13253 232 aa19.35■□□□□ 0.69
CSHL1-208ENST00000558609 PUM3Q15397 648 aaKnown RBP19.35■□□□□ 0.69
CSHL1-208ENST00000558609 ATG9AQ7Z3C6 839 aa19.35■□□□□ 0.69
CSHL1-208ENST00000558609 VPS37DQ86XT2 251 aa19.35■□□□□ 0.69
CSHL1-208ENST00000558609 APOBEC3FQ8IUX4 373 aaKnown RBP19.35■□□□□ 0.69
CSHL1-208ENST00000558609 ZBED9Q6R2W3 1325 aa19.34■□□□□ 0.69
CSHL1-208ENST00000558609 F8W031 263 aaPredicted RBP19.34■□□□□ 0.69
CSHL1-208ENST00000558609 CFAP100Q494V2 611 aa19.34■□□□□ 0.69
CSHL1-208ENST00000558609 MFSD14BQ5SR56 506 aa19.34■□□□□ 0.69
CSHL1-208ENST00000558609 FRAT1Q92837 279 aaPredicted RBP19.34■□□□□ 0.69
CSHL1-208ENST00000558609 CCDC102AQ96A19 550 aa19.34■□□□□ 0.69
CSHL1-208ENST00000558609 BEGAINQ9BUH8 593 aa19.34■□□□□ 0.69
CSHL1-208ENST00000558609 SPDYE2BA6NHP3 402 aa19.33■□□□□ 0.68
CSHL1-208ENST00000558609 FAM155AB1AL88 458 aaPredicted RBP19.33■□□□□ 0.68
CSHL1-208ENST00000558609 IFIT1P09914 478 aaKnown RBP19.33■□□□□ 0.68
CSHL1-208ENST00000558609 SPDYE6P0CI01 402 aa19.33■□□□□ 0.68
CSHL1-208ENST00000558609 PRAMEF18Q5VWM3 479 aa19.33■□□□□ 0.68
CSHL1-208ENST00000558609 BCAMP50895 628 aa19.32■□□□□ 0.68
CSHL1-208ENST00000558609 ZNF157P51786 506 aaPredicted RBP19.32■□□□□ 0.68
CSHL1-208ENST00000558609 LPIN2Q92539 896 aa19.32■□□□□ 0.68
CSHL1-208ENST00000558609 PRMT6Q96LA8 375 aaPredicted RBP19.32■□□□□ 0.68
CSHL1-208ENST00000558609 COPRSQ9NQ92 184 aa19.32■□□□□ 0.68
CSHL1-208ENST00000558609 TNNQ9UQP3 1299 aa19.32■□□□□ 0.68
CSHL1-208ENST00000558609 PCDHAC2Q9Y5I4 1007 aa19.32■□□□□ 0.68
CSHL1-208ENST00000558609 PAPPA2Q9BXP8 1791 aa19.32■□□□□ 0.68
CSHL1-208ENST00000558609 MYO1BO43795 1136 aa19.31■□□□□ 0.68
CSHL1-208ENST00000558609 SLC5A1P13866 664 aa19.31■□□□□ 0.68
CSHL1-208ENST00000558609 MLLT1Q03111 559 aaPredicted RBP19.31■□□□□ 0.68
CSHL1-208ENST00000558609 MTX1Q13505 466 aa19.31■□□□□ 0.68
CSHL1-208ENST00000558609 ZKSCAN2Q63HK3 967 aa19.31■□□□□ 0.68
CSHL1-208ENST00000558609 TBC1D22AQ8WUA7 517 aa19.31■□□□□ 0.68
CSHL1-208ENST00000558609 SIL1Q9H173 461 aa19.31■□□□□ 0.68
CSHL1-208ENST00000558609 CEP126Q9P2H0 1117 aa19.31■□□□□ 0.68
CSHL1-208ENST00000558609 SERPINA10Q9UK55 444 aa19.31■□□□□ 0.68
CSHL1-208ENST00000558609 TTF2Q9UNY4 1162 aaKnown RBP19.31■□□□□ 0.68
CSHL1-208ENST00000558609 IQSEC3Q9UPP2 1182 aaPredicted RBP19.31■□□□□ 0.68
CSHL1-208ENST00000558609 FRAT2O75474 233 aaPredicted RBP19.3■□□□□ 0.68
CSHL1-208ENST00000558609 NF2P35240 595 aa19.3■□□□□ 0.68
CSHL1-208ENST00000558609 IL15P40933 162 aaPredicted RBP19.3■□□□□ 0.68
CSHL1-208ENST00000558609 CLUAP1Q96AJ1 413 aa19.3■□□□□ 0.68
CSHL1-208ENST00000558609 ZIC5Q96T25 663 aa19.3■□□□□ 0.68
CSHL1-208ENST00000558609 DEFB129Q9H1M3 183 aa19.3■□□□□ 0.68
CSHL1-208ENST00000558609 PA2G4Q9UQ80 394 aaKnown RBP19.3■□□□□ 0.68
CSHL1-208ENST00000558609 COL1A1P02452 1464 aaPredicted RBP19.29■□□□□ 0.68
CSHL1-208ENST00000558609 CA12O43570 354 aa19.29■□□□□ 0.68
CSHL1-208ENST00000558609 SLC10A3P09131 477 aa19.29■□□□□ 0.68
CSHL1-208ENST00000558609 RBM5P52756 815 aaKnown RBP eCLIP19.29■□□□□ 0.68
CSHL1-208ENST00000558609 PPP2R3BQ9Y5P8 575 aa19.29■□□□□ 0.68
CSHL1-208ENST00000558609 ECM29Q5VYK3 1845 aa19.28■□□□□ 0.68
CSHL1-208ENST00000558609 GNAI2P04899 355 aa19.28■□□□□ 0.68
CSHL1-208ENST00000558609 CHAF1AQ13111 956 aaPredicted RBP19.28■□□□□ 0.68
CSHL1-208ENST00000558609 ATP2B3Q16720 1220 aa19.28■□□□□ 0.68
CSHL1-208ENST00000558609 MOB2Q70IA6 237 aa19.28■□□□□ 0.68
CSHL1-208ENST00000558609 MCOLN1Q9GZU1 580 aa19.28■□□□□ 0.68
CSHL1-208ENST00000558609 ARAP2Q8WZ64 1704 aa19.28■□□□□ 0.68
CSHL1-208ENST00000558609 AOX1Q06278 1338 aa19.27■□□□□ 0.68
CSHL1-208ENST00000558609 CLRN2A0PK11 232 aa19.27■□□□□ 0.68
CSHL1-208ENST00000558609 UBE2Q2LH0YL09 131 aa19.27■□□□□ 0.68
CSHL1-208ENST00000558609 SRGAP3O43295 1099 aa19.27■□□□□ 0.68
CSHL1-208ENST00000558609 HDLBPQ00341 1268 aaKnown RBP19.27■□□□□ 0.68
CSHL1-208ENST00000558609 KIF23Q02241 960 aaPredicted RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms