RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 PODXL2Q9NZ53 605 aa19.37■□□□□ 0.69
LINC01220-201ENST00000558575 HDAC9Q9UKV0 1011 aa19.37■□□□□ 0.69
LINC01220-201ENST00000558575 RBM26Q5T8P6 1007 aaKnown RBP19.36■□□□□ 0.69
LINC01220-201ENST00000558575 LDHAL6AQ6ZMR3 332 aa19.36■□□□□ 0.69
LINC01220-201ENST00000558575 DCPSQ96C86 337 aaKnown RBP19.36■□□□□ 0.69
LINC01220-201ENST00000558575 DDX19BQ9UMR2 479 aa19.36■□□□□ 0.69
LINC01220-201ENST00000558575 RIPOR2Q9Y4F9 1068 aa19.36■□□□□ 0.69
LINC01220-201ENST00000558575 SUPT16HQ9Y5B9 1047 aaKnown RBP19.36■□□□□ 0.69
LINC01220-201ENST00000558575 PNMA6EA0A0J9YXQ4 647 aa19.35■□□□□ 0.69
LINC01220-201ENST00000558575 LRRC24Q50LG9 513 aa19.35■□□□□ 0.69
LINC01220-201ENST00000558575 TBC1D16Q8TBP0 767 aa19.35■□□□□ 0.69
LINC01220-201ENST00000558575 CDCA5Q96FF9 252 aa19.35■□□□□ 0.69
LINC01220-201ENST00000558575 ATP8B2P98198 1209 aa19.34■□□□□ 0.69
LINC01220-201ENST00000558575 CHRNDQ07001 517 aa19.34■□□□□ 0.69
LINC01220-201ENST00000558575 TAF7LQ5H9L4 462 aa19.34■□□□□ 0.69
LINC01220-201ENST00000558575 FBXO46Q6PJ61 603 aaPredicted RBP19.34■□□□□ 0.69
LINC01220-201ENST00000558575 REM2Q8IYK8 340 aaPredicted RBP19.34■□□□□ 0.69
LINC01220-201ENST00000558575 HELBQ8NG08 1087 aaPredicted RBP19.34■□□□□ 0.69
LINC01220-201ENST00000558575 GGA3Q9NZ52 723 aa19.34■□□□□ 0.69
LINC01220-201ENST00000558575 PA2G4Q9UQ80 394 aaKnown RBP19.34■□□□□ 0.69
LINC01220-201ENST00000558575 SNAP23O00161 211 aa19.33■□□□□ 0.68
LINC01220-201ENST00000558575 SRGAP3O43295 1099 aa19.33■□□□□ 0.68
LINC01220-201ENST00000558575 DBNDD1Q9H9R9 158 aa19.33■□□□□ 0.68
LINC01220-201ENST00000558575 CNNM1Q9NRU3 951 aa19.33■□□□□ 0.68
LINC01220-201ENST00000558575 ANKIB1Q9P2G1 1089 aa19.33■□□□□ 0.68
LINC01220-201ENST00000558575 XDHP47989 1333 aa19.32■□□□□ 0.68
LINC01220-201ENST00000558575 C6orf229H3BNL8 230 aa19.32■□□□□ 0.68
LINC01220-201ENST00000558575 TAF5LO75529 589 aa19.32■□□□□ 0.68
LINC01220-201ENST00000558575 POLA2Q14181 598 aa19.32■□□□□ 0.68
LINC01220-201ENST00000558575 ATG9AQ7Z3C6 839 aa19.32■□□□□ 0.68
LINC01220-201ENST00000558575 COPRSQ9NQ92 184 aa19.32■□□□□ 0.68
LINC01220-201ENST00000558575 KCNQ5Q9NR82 932 aa19.32■□□□□ 0.68
LINC01220-201ENST00000558575 LAMB1P07942 1786 aa19.32■□□□□ 0.68
LINC01220-201ENST00000558575 CENPFP49454 3210 aa19.31■□□□□ 0.68
LINC01220-201ENST00000558575 EYA2O00167 538 aa19.31■□□□□ 0.68
LINC01220-201ENST00000558575 UFL1O94874 794 aa19.31■□□□□ 0.68
LINC01220-201ENST00000558575 KIF4BQ2VIQ3 1234 aa19.31■□□□□ 0.68
LINC01220-201ENST00000558575 CEP85Q6P2H3 762 aa19.31■□□□□ 0.68
LINC01220-201ENST00000558575 SULF1Q8IWU6 871 aa19.31■□□□□ 0.68
LINC01220-201ENST00000558575 SSH3Q8TE77 659 aa19.31■□□□□ 0.68
LINC01220-201ENST00000558575 ANKRD2Q9GZV1 360 aa19.31■□□□□ 0.68
LINC01220-201ENST00000558575 GGA1Q9UJY5 639 aa19.31■□□□□ 0.68
LINC01220-201ENST00000558575 SZT2Q5T011 3432 aa19.31■□□□□ 0.68
LINC01220-201ENST00000558575 POTEFA5A3E0 1075 aa19.3■□□□□ 0.68
LINC01220-201ENST00000558575 GPR25O00155 361 aa19.3■□□□□ 0.68
LINC01220-201ENST00000558575 ATP2B4P23634 1241 aa19.3■□□□□ 0.68
LINC01220-201ENST00000558575 MOB2Q70IA6 237 aa19.3■□□□□ 0.68
LINC01220-201ENST00000558575 SIRT2Q8IXJ6 389 aa19.3■□□□□ 0.68
LINC01220-201ENST00000558575 CRBNQ96SW2 442 aa19.3■□□□□ 0.68
LINC01220-201ENST00000558575 ZNF646O15015 1829 aaPredicted RBP19.3■□□□□ 0.68
LINC01220-201ENST00000558575 RIMBP2O15034 1052 aa19.29■□□□□ 0.68
LINC01220-201ENST00000558575 RPS12P25398 132 aaKnown RBP19.29■□□□□ 0.68
LINC01220-201ENST00000558575 KLRK1P26718 216 aa19.29■□□□□ 0.68
LINC01220-201ENST00000558575 WASHC4Q2M389 1173 aa19.29■□□□□ 0.68
LINC01220-201ENST00000558575 TXNRD3Q86VQ6 643 aa19.29■□□□□ 0.68
LINC01220-201ENST00000558575 VGLL2Q8N8G2 317 aa19.29■□□□□ 0.68
LINC01220-201ENST00000558575 SIL1Q9H173 461 aa19.29■□□□□ 0.68
LINC01220-201ENST00000558575 LEMD3Q9Y2U8 911 aa19.29■□□□□ 0.68
LINC01220-201ENST00000558575 CUL9Q8IWT3 2517 aa19.29■□□□□ 0.68
LINC01220-201ENST00000558575 IRS2Q9Y4H2 1338 aa19.28■□□□□ 0.68
LINC01220-201ENST00000558575 NOM1Q5C9Z4 860 aaKnown RBP19.28■□□□□ 0.68
LINC01220-201ENST00000558575 R3HDMLQ9H3Y0 253 aa19.28■□□□□ 0.68
LINC01220-201ENST00000558575 ZNF804BA4D1E1 1349 aa19.27■□□□□ 0.68
LINC01220-201ENST00000558575 BRCA2P51587 3418 aa19.27■□□□□ 0.68
LINC01220-201ENST00000558575 CIAO1O76071 339 aa19.27■□□□□ 0.68
LINC01220-201ENST00000558575 FBXO3Q9UK99 471 aa19.27■□□□□ 0.68
LINC01220-201ENST00000558575 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.27■□□□□ 0.68
LINC01220-201ENST00000558575 SPEF2Q9C093 1822 aa19.27■□□□□ 0.68
LINC01220-201ENST00000558575 MROH5Q6ZUA9 1318 aa19.26■□□□□ 0.67
LINC01220-201ENST00000558575 ECE2O60344 883 aa19.26■□□□□ 0.67
LINC01220-201ENST00000558575 DOK7Q18PE1 504 aa19.26■□□□□ 0.67
LINC01220-201ENST00000558575 ANGEL2Q5VTE6 544 aaKnown RBP19.26■□□□□ 0.67
LINC01220-201ENST00000558575 EYA3Q99504 573 aa19.26■□□□□ 0.67
LINC01220-201ENST00000558575 ZC3H12CQ9C0D7 883 aaKnown RBP19.26■□□□□ 0.67
LINC01220-201ENST00000558575 CHMP4BQ9H444 224 aaKnown RBP19.26■□□□□ 0.67
LINC01220-201ENST00000558575 PDE8BO95263 885 aa19.25■□□□□ 0.67
LINC01220-201ENST00000558575 TM4SF4P48230 202 aa19.25■□□□□ 0.67
LINC01220-201ENST00000558575 FKBP1BP68106 108 aa19.25■□□□□ 0.67
LINC01220-201ENST00000558575 METTL24Q5JXM2 366 aa19.25■□□□□ 0.67
LINC01220-201ENST00000558575 RPAP2Q8IXW5 612 aaPredicted RBP19.25■□□□□ 0.67
LINC01220-201ENST00000558575 NOP58Q9Y2X3 529 aaKnown RBP19.25■□□□□ 0.67
LINC01220-201ENST00000558575 UBE2Q2LH0YL09 131 aa19.24■□□□□ 0.67
LINC01220-201ENST00000558575 FKTNO75072 461 aa19.24■□□□□ 0.67
LINC01220-201ENST00000558575 FGFR2P21802 821 aa19.24■□□□□ 0.67
LINC01220-201ENST00000558575 IL15P40933 162 aaPredicted RBP19.24■□□□□ 0.67
LINC01220-201ENST00000558575 UBE4AQ14139 1066 aa19.24■□□□□ 0.67
LINC01220-201ENST00000558575 C15orf52Q6ZUT6 534 aaKnown RBP19.24■□□□□ 0.67
LINC01220-201ENST00000558575 SCAF8Q9UPN6 1271 aaKnown RBP19.24■□□□□ 0.67
LINC01220-201ENST00000558575 PCDHB15Q9Y5E8 787 aa19.24■□□□□ 0.67
LINC01220-201ENST00000558575 SASH1O94885 1247 aa19.23■□□□□ 0.67
LINC01220-201ENST00000558575 MED23Q9ULK4 1368 aa19.22■□□□□ 0.67
LINC01220-201ENST00000558575 VIL1P09327 827 aaKnown RBP19.22■□□□□ 0.67
LINC01220-201ENST00000558575 KCNJ4P48050 445 aa19.22■□□□□ 0.67
LINC01220-201ENST00000558575 MKRN3Q13064 507 aaKnown RBP19.22■□□□□ 0.67
LINC01220-201ENST00000558575 SCARF1Q14162 830 aa19.22■□□□□ 0.67
LINC01220-201ENST00000558575 EXOC6Q8TAG9 804 aa19.22■□□□□ 0.67
LINC01220-201ENST00000558575 CFHR5Q9BXR6 569 aa19.22■□□□□ 0.67
LINC01220-201ENST00000558575 COLQQ9Y215 455 aaPredicted RBP19.22■□□□□ 0.67
LINC01220-201ENST00000558575 ZNF609O15014 1411 aa19.22■□□□□ 0.67
LINC01220-201ENST00000558575 SURF6O75683 361 aaKnown RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms