RNA–Protein interactions for RNA: ENST00000558396.1

EXD1-203, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

TSL 4

Gene EXD1, Length 483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-203ENST00000558396 GOLIM4O00461 696 aa11.07□□□□□ -0.64
EXD1-203ENST00000558396 YEATS4O95619 227 aa11.07□□□□□ -0.64
EXD1-203ENST00000558396 HSPD1P10809 573 aaKnown RBP11.07□□□□□ -0.64
EXD1-203ENST00000558396 ZC3H6P61129 1189 aaKnown RBP11.07□□□□□ -0.64
EXD1-203ENST00000558396 IMMTQ16891 758 aaKnown RBP11.07□□□□□ -0.64
EXD1-203ENST00000558396 CCDC158Q5M9N0 1113 aa11.07□□□□□ -0.64
EXD1-203ENST00000558396 UTP14CQ5TAP6 766 aaKnown RBP11.07□□□□□ -0.64
EXD1-203ENST00000558396 CCDC129Q6ZRS4 1044 aa11.07□□□□□ -0.64
EXD1-203ENST00000558396 STOX1Q6ZVD7 989 aa11.07□□□□□ -0.64
EXD1-203ENST00000558396 ATG9AQ7Z3C6 839 aa11.07□□□□□ -0.64
EXD1-203ENST00000558396 MPNDQ8N594 471 aa11.07□□□□□ -0.64
EXD1-203ENST00000558396 MRPS27Q92552 414 aaKnown RBP11.07□□□□□ -0.64
EXD1-203ENST00000558396 EDC3Q96F86 508 aaKnown RBP11.07□□□□□ -0.64
EXD1-203ENST00000558396 DDX11Q96FC9 970 aa11.07□□□□□ -0.64
EXD1-203ENST00000558396 NEUROD6Q96NK8 337 aa11.07□□□□□ -0.64
EXD1-203ENST00000558396 A0A0G2JS52 829 aa11.06□□□□□ -0.64
EXD1-203ENST00000558396 TNNT1P13805 278 aa11.06□□□□□ -0.64
EXD1-203ENST00000558396 PDIA3P30101 505 aaKnown RBP11.06□□□□□ -0.64
EXD1-203ENST00000558396 APOBRQ0VD83 1088 aa11.06□□□□□ -0.64
EXD1-203ENST00000558396 TPD52L1Q16890 204 aaPredicted RBP11.06□□□□□ -0.64
EXD1-203ENST00000558396 ADALQ6DHV7 355 aa11.06□□□□□ -0.64
EXD1-203ENST00000558396 ZNF710Q8N1W2 664 aa11.06□□□□□ -0.64
EXD1-203ENST00000558396 C17orf53Q8N3J3 647 aaPredicted RBP11.06□□□□□ -0.64
EXD1-203ENST00000558396 ENGASEQ8NFI3 743 aa11.06□□□□□ -0.64
EXD1-203ENST00000558396 CEP126Q9P2H0 1117 aa11.06□□□□□ -0.64
EXD1-203ENST00000558396 CGNQ9P2M7 1197 aaKnown RBP11.06□□□□□ -0.64
EXD1-203ENST00000558396 PCDH11XQ9BZA7 1347 aa11.06□□□□□ -0.64
EXD1-203ENST00000558396 PCDH11YQ9BZA8 1340 aa11.06□□□□□ -0.64
EXD1-203ENST00000558396 CARMIL3Q8ND23 1372 aa11.05□□□□□ -0.64
EXD1-203ENST00000558396 ATP5J2-PTCD1G3V325 749 aa11.05□□□□□ -0.64
EXD1-203ENST00000558396 CYP27B1O15528 508 aa11.05□□□□□ -0.64
EXD1-203ENST00000558396 MYO1BO43795 1136 aa11.05□□□□□ -0.64
EXD1-203ENST00000558396 PTCD1O75127 700 aaKnown RBP11.05□□□□□ -0.64
EXD1-203ENST00000558396 CTDNEP1O95476 244 aa11.05□□□□□ -0.64
EXD1-203ENST00000558396 KCNJ6P48051 423 aa11.05□□□□□ -0.64
EXD1-203ENST00000558396 ME1P48163 572 aa11.05□□□□□ -0.64
EXD1-203ENST00000558396 LRRC8AQ8IWT6 810 aa11.05□□□□□ -0.64
EXD1-203ENST00000558396 FSIP1Q8NA03 581 aa11.05□□□□□ -0.64
EXD1-203ENST00000558396 CCDC150Q8NCX0 1101 aa11.05□□□□□ -0.64
EXD1-203ENST00000558396 CCDC112Q8NEF3 446 aa11.05□□□□□ -0.64
EXD1-203ENST00000558396 PKNOX2Q96KN3 472 aa11.05□□□□□ -0.64
EXD1-203ENST00000558396 SEC62Q99442 399 aaKnown RBP11.05□□□□□ -0.64
EXD1-203ENST00000558396 GTPBP4Q9BZE4 634 aaKnown RBP11.05□□□□□ -0.64
EXD1-203ENST00000558396 POLR3EQ9NVU0 708 aa11.05□□□□□ -0.64
EXD1-203ENST00000558396 RGPD5Q99666 1765 aa11.05□□□□□ -0.64
EXD1-203ENST00000558396 MAST3O60307 1309 aa11.05□□□□□ -0.64
EXD1-203ENST00000558396 TNS1Q9HBL0 1735 aaKnown RBP11.04□□□□□ -0.64
EXD1-203ENST00000558396 MYH15Q9Y2K3 1946 aa11.04□□□□□ -0.64
EXD1-203ENST00000558396 COL14A1Q05707 1796 aaKnown RBP11.04□□□□□ -0.64
EXD1-203ENST00000558396 CCP110O43303 1012 aa11.04□□□□□ -0.64
EXD1-203ENST00000558396 CDKL5O76039 1030 aa11.04□□□□□ -0.64
EXD1-203ENST00000558396 EN1Q05925 392 aaPredicted RBP11.04□□□□□ -0.64
EXD1-203ENST00000558396 TRIM28Q13263 835 aaKnown RBP11.04□□□□□ -0.64
EXD1-203ENST00000558396 SNW1Q13573 536 aaKnown RBP11.04□□□□□ -0.64
EXD1-203ENST00000558396 STK38Q15208 465 aa11.04□□□□□ -0.64
EXD1-203ENST00000558396 SF3A1Q15459 793 aaKnown RBP11.04□□□□□ -0.64
EXD1-203ENST00000558396 FAM98CQ17RN3 349 aaKnown RBP11.04□□□□□ -0.64
EXD1-203ENST00000558396 TTC39AQ5SRH9 613 aa11.04□□□□□ -0.64
EXD1-203ENST00000558396 USP28Q96RU2 1077 aa11.04□□□□□ -0.64
EXD1-203ENST00000558396 PLA2G12BQ9BX93 195 aa11.04□□□□□ -0.64
EXD1-203ENST00000558396 OSBPL5Q9H0X9 879 aaPredicted RBP11.04□□□□□ -0.64
EXD1-203ENST00000558396 NUP188Q5SRE5 1749 aa11.04□□□□□ -0.64
EXD1-203ENST00000558396 A0A1B0GUL7 405 aa11.03□□□□□ -0.64
EXD1-203ENST00000558396 COL9A3Q14050 684 aaPredicted RBP11.03□□□□□ -0.64
EXD1-203ENST00000558396 NKX1-1Q15270 411 aaPredicted RBP11.03□□□□□ -0.64
EXD1-203ENST00000558396 CCDC57Q2TAC2 916 aa11.03□□□□□ -0.64
EXD1-203ENST00000558396 PPP4R3BQ5MIZ7 849 aa11.03□□□□□ -0.64
EXD1-203ENST00000558396 GORABQ5T7V8 394 aa11.03□□□□□ -0.64
EXD1-203ENST00000558396 CEP135Q66GS9 1140 aa11.03□□□□□ -0.64
EXD1-203ENST00000558396 CPLX2Q6PUV4 134 aaKnown RBP11.03□□□□□ -0.64
EXD1-203ENST00000558396 SYNE3Q6ZMZ3 975 aa11.03□□□□□ -0.64
EXD1-203ENST00000558396 RALYLQ86SE5 291 aaKnown RBP11.03□□□□□ -0.64
EXD1-203ENST00000558396 FMR1NBQ8N0W7 255 aaPredicted RBP11.03□□□□□ -0.64
EXD1-203ENST00000558396 JMYQ8N9B5 988 aa11.03□□□□□ -0.64
EXD1-203ENST00000558396 NCOA7Q8NI08 942 aa11.03□□□□□ -0.64
EXD1-203ENST00000558396 CACTINQ8WUQ7 758 aaKnown RBP11.03□□□□□ -0.64
EXD1-203ENST00000558396 APPBP2Q92624 585 aa11.03□□□□□ -0.64
EXD1-203ENST00000558396 C8orf76Q96K31 380 aa11.03□□□□□ -0.64
EXD1-203ENST00000558396 TIGD1Q96MW7 591 aa11.03□□□□□ -0.64
EXD1-203ENST00000558396 SDF4Q9BRK5 362 aa11.03□□□□□ -0.64
EXD1-203ENST00000558396 TEX13AQ9BXU3 409 aaPredicted RBP11.03□□□□□ -0.64
EXD1-203ENST00000558396 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.03□□□□□ -0.64
EXD1-203ENST00000558396 TJP1Q07157 1748 aa11.02□□□□□ -0.65
EXD1-203ENST00000558396 CPLX1O14810 134 aa11.02□□□□□ -0.65
EXD1-203ENST00000558396 NLRP12P59046 1061 aa11.02□□□□□ -0.65
EXD1-203ENST00000558396 CCT2P78371 535 aaKnown RBP11.02□□□□□ -0.65
EXD1-203ENST00000558396 PTPN14Q15678 1187 aa11.02□□□□□ -0.65
EXD1-203ENST00000558396 C11orf57Q6ZUT1 292 aaPredicted RBP11.02□□□□□ -0.65
EXD1-203ENST00000558396 DHX40Q8IX18 779 aaKnown RBP11.02□□□□□ -0.65
EXD1-203ENST00000558396 LINC00301Q8NCQ3 95 aa11.02□□□□□ -0.65
EXD1-203ENST00000558396 ZNF512BQ96KM6 892 aaPredicted RBP11.02□□□□□ -0.65
EXD1-203ENST00000558396 ISCA1Q9BUE6 129 aa11.02□□□□□ -0.65
EXD1-203ENST00000558396 LRRC2Q9BYS8 371 aa11.02□□□□□ -0.65
EXD1-203ENST00000558396 GOLPH3LQ9H4A5 285 aa11.02□□□□□ -0.65
EXD1-203ENST00000558396 BTG4Q9NY30 223 aa11.02□□□□□ -0.65
EXD1-203ENST00000558396 OGFRQ9NZT2 677 aa11.02□□□□□ -0.65
EXD1-203ENST00000558396 KIAA1468Q9P260 1216 aa11.02□□□□□ -0.65
EXD1-203ENST00000558396 NAP1L2Q9ULW6 460 aaPredicted RBP11.02□□□□□ -0.65
EXD1-203ENST00000558396 PCDHA7Q9UN72 937 aa11.02□□□□□ -0.65
EXD1-203ENST00000558396 UBR2Q8IWV8 1755 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms