RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 ISM2Q6H9L7 571 aa5.87□□□□□ -1.47
HMG20A-204ENST00000558288 ARMCX5Q6P1M9 558 aa5.87□□□□□ -1.47
HMG20A-204ENST00000558288 LEKR1Q6ZMV7 388 aa5.87□□□□□ -1.47
HMG20A-204ENST00000558288 CARD10Q9BWT7 1032 aa5.87□□□□□ -1.47
HMG20A-204ENST00000558288 IMPACTQ9P2X3 320 aa5.87□□□□□ -1.47
HMG20A-204ENST00000558288 LCMT1Q9UIC8 334 aa5.87□□□□□ -1.47
HMG20A-204ENST00000558288 CCP110O43303 1012 aa5.87□□□□□ -1.47
HMG20A-204ENST00000558288 LMOD1P29536 600 aaPredicted RBP5.87□□□□□ -1.47
HMG20A-204ENST00000558288 TOB2Q14106 344 aaPredicted RBP5.87□□□□□ -1.47
HMG20A-204ENST00000558288 TAF7Q15545 349 aaPredicted RBP5.87□□□□□ -1.47
HMG20A-204ENST00000558288 ARHGEF25Q86VW2 580 aa5.87□□□□□ -1.47
HMG20A-204ENST00000558288 MTFR1LQ9H019 292 aa5.87□□□□□ -1.47
HMG20A-204ENST00000558288 BOLA2Q9H3K6 86 aa5.87□□□□□ -1.47
HMG20A-204ENST00000558288 ZSCAN16Q9H4T2 348 aaPredicted RBP5.87□□□□□ -1.47
HMG20A-204ENST00000558288 ARFGAP3Q9NP61 516 aa5.87□□□□□ -1.47
HMG20A-204ENST00000558288 PA2G4Q9UQ80 394 aaKnown RBP5.87□□□□□ -1.47
HMG20A-204ENST00000558288 ZNF330Q9Y3S2 320 aaPredicted RBP5.87□□□□□ -1.47
HMG20A-204ENST00000558288 TAF6LQ9Y6J9 622 aa5.87□□□□□ -1.47
HMG20A-204ENST00000558288 GIGYF1O75420 1035 aaPredicted RBP5.87□□□□□ -1.47
HMG20A-204ENST00000558288 ZRANB2O95218 330 aaKnown RBP eCLIP5.87□□□□□ -1.47
HMG20A-204ENST00000558288 TPM1P09493 284 aa5.87□□□□□ -1.47
HMG20A-204ENST00000558288 NBPF11Q86T75 865 aa5.87□□□□□ -1.47
HMG20A-204ENST00000558288 UTP14AQ9BVJ6 771 aaKnown RBP5.87□□□□□ -1.47
HMG20A-204ENST00000558288 CCDC8Q9H0W5 538 aaPredicted RBP5.87□□□□□ -1.47
HMG20A-204ENST00000558288 ZSWIM4Q9H7M6 989 aa5.87□□□□□ -1.47
HMG20A-204ENST00000558288 EFCC1Q9HA90 598 aa5.87□□□□□ -1.47
HMG20A-204ENST00000558288 FMN2Q9NZ56 1722 aa5.87□□□□□ -1.47
HMG20A-204ENST00000558288 MAP3K19Q56UN5 1328 aa5.87□□□□□ -1.47
HMG20A-204ENST00000558288 A0A0D9SFI3 127 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 A0A1B0GVL5 298 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 SERPINC1P01008 464 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 TATP17735 454 aaPredicted RBP5.86□□□□□ -1.47
HMG20A-204ENST00000558288 CASQ1P31415 396 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 FAM160A1Q05DH4 1040 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 GOLGA8FQ08AF8 430 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 GOLGA8DPQ0D2H9 430 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 POLA2Q14181 598 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 DPCR1Q3MIW9 517 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 CCDC93Q567U6 631 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 NOM1Q5C9Z4 860 aaKnown RBP5.86□□□□□ -1.47
HMG20A-204ENST00000558288 Q6ZUG5 572 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 MAP4K1Q92918 833 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 CHMP4CQ96CF2 233 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 ZNF396Q96N95 335 aaPredicted RBP5.86□□□□□ -1.47
HMG20A-204ENST00000558288 OSBPL5Q9H0X9 879 aaPredicted RBP5.86□□□□□ -1.47
HMG20A-204ENST00000558288 TOMM22Q9NS69 142 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 C9orf78Q9NZ63 289 aaPredicted RBP5.86□□□□□ -1.47
HMG20A-204ENST00000558288 RRP15Q9Y3B9 282 aaKnown RBP5.86□□□□□ -1.47
HMG20A-204ENST00000558288 TUBGCP6Q96RT7 1819 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 MAP3K5Q99683 1374 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 EFCAB8A8MWE9 144 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 HIP1O00291 1037 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 SASH3O75995 380 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 GNG11P61952 73 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 CCT2P78371 535 aaKnown RBP5.86□□□□□ -1.47
HMG20A-204ENST00000558288 PTPN21Q16825 1174 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 LRRFIP1Q32MZ4 808 aaKnown RBP5.86□□□□□ -1.47
HMG20A-204ENST00000558288 MUM1L1Q5H9M0 696 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 CCDC158Q5M9N0 1113 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 PDILTQ8N807 584 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 ZNF784Q8NCA9 323 aaPredicted RBP5.86□□□□□ -1.47
HMG20A-204ENST00000558288 ZCRB1Q8TBF4 217 aaKnown RBP5.86□□□□□ -1.47
HMG20A-204ENST00000558288 USP28Q96RU2 1077 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 SRRTQ9BXP5 876 aaKnown RBP5.86□□□□□ -1.47
HMG20A-204ENST00000558288 VPS18Q9P253 973 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 BRWD3Q6RI45 1802 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 ANXA1P04083 346 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 MCM6Q14566 821 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 SKIDA1Q1XH10 827 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 CFAP100Q494V2 611 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 CC2D1AQ6P1N0 951 aaPredicted RBP5.86□□□□□ -1.47
HMG20A-204ENST00000558288 SMIM5Q71RC9 77 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 GOLGA5Q8TBA6 731 aa5.86□□□□□ -1.47
HMG20A-204ENST00000558288 PHLPP2Q6ZVD8 1323 aa5.85□□□□□ -1.47
HMG20A-204ENST00000558288 CAMTA1Q9Y6Y1 1673 aa5.85□□□□□ -1.47
HMG20A-204ENST00000558288 PI4KAP2A4QPH2 592 aa5.85□□□□□ -1.47
HMG20A-204ENST00000558288 PLSCR1O15162 318 aa5.85□□□□□ -1.47
HMG20A-204ENST00000558288 DHX16O60231 1041 aaKnown RBP5.85□□□□□ -1.47
HMG20A-204ENST00000558288 TADA3O75528 432 aa5.85□□□□□ -1.47
HMG20A-204ENST00000558288 TBC1D8O95759 1140 aa5.85□□□□□ -1.47
HMG20A-204ENST00000558288 TUBB4AP04350 444 aa5.85□□□□□ -1.47
HMG20A-204ENST00000558288 PI4KAP1Q8N8J0 262 aa5.85□□□□□ -1.47
HMG20A-204ENST00000558288 MRPS27Q92552 414 aaKnown RBP5.85□□□□□ -1.47
HMG20A-204ENST00000558288 NEK1Q96PY6 1258 aa5.85□□□□□ -1.47
HMG20A-204ENST00000558288 ADAM21Q9UKJ8 722 aa5.85□□□□□ -1.47
HMG20A-204ENST00000558288 PPP2R3AQ06190 1150 aa5.85□□□□□ -1.47
HMG20A-204ENST00000558288 STK38Q15208 465 aa5.85□□□□□ -1.47
HMG20A-204ENST00000558288 DNAAF4Q8WXU2 420 aa5.85□□□□□ -1.47
HMG20A-204ENST00000558288 USP6P35125 1406 aa5.85□□□□□ -1.47
HMG20A-204ENST00000558288 GNAT3A8MTJ3 354 aa5.85□□□□□ -1.47
HMG20A-204ENST00000558288 ZSCAN12O43309 604 aa5.85□□□□□ -1.47
HMG20A-204ENST00000558288 SLC3A2P08195 630 aaKnown RBP5.85□□□□□ -1.47
HMG20A-204ENST00000558288 UBASH3AP57075 661 aa5.85□□□□□ -1.47
HMG20A-204ENST00000558288 FANCCQ00597 558 aa5.85□□□□□ -1.47
HMG20A-204ENST00000558288 G3BP1Q13283 466 aaKnown RBP eCLIP5.85□□□□□ -1.47
HMG20A-204ENST00000558288 SRLQ86TD4 932 aa5.85□□□□□ -1.47
HMG20A-204ENST00000558288 ZNF589Q86UQ0 364 aaPredicted RBP5.85□□□□□ -1.47
HMG20A-204ENST00000558288 ERC1Q8IUD2 1116 aa5.85□□□□□ -1.47
HMG20A-204ENST00000558288 NFATC2IPQ8NCF5 419 aa5.85□□□□□ -1.47
HMG20A-204ENST00000558288 FBXO18Q8NFZ0 1043 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms