RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 KIAA0232Q92628 1395 aa8.91□□□□□ -0.98
MARK3-212ENST00000558223 PPEF1O14829 653 aaPredicted RBP8.91□□□□□ -0.98
MARK3-212ENST00000558223 MPSTP25325 297 aa8.91□□□□□ -0.98
MARK3-212ENST00000558223 PDXDC2PQ6P474 469 aa8.91□□□□□ -0.98
MARK3-212ENST00000558223 SCUBE3Q8IX30 993 aa8.91□□□□□ -0.98
MARK3-212ENST00000558223 PANK1Q8TE04 598 aa8.91□□□□□ -0.98
MARK3-212ENST00000558223 SSH1Q8WYL5 1049 aa8.91□□□□□ -0.98
MARK3-212ENST00000558223 COL26A1Q96A83 441 aa8.91□□□□□ -0.98
MARK3-212ENST00000558223 CHPF2Q9P2E5 772 aa8.91□□□□□ -0.98
MARK3-212ENST00000558223 PDZRN3Q9UPQ7 1066 aa8.91□□□□□ -0.98
MARK3-212ENST00000558223 TOPAZ1Q8N9V7 1692 aa8.91□□□□□ -0.98
MARK3-212ENST00000558223 RTL1A6NKG5 1358 aa8.9□□□□□ -0.98
MARK3-212ENST00000558223 VAMP4O75379 141 aa8.9□□□□□ -0.98
MARK3-212ENST00000558223 MAP4K4O95819 1239 aaPredicted RBP8.9□□□□□ -0.98
MARK3-212ENST00000558223 F12P00748 615 aaPredicted RBP8.9□□□□□ -0.98
MARK3-212ENST00000558223 CTHP32929 405 aa8.9□□□□□ -0.98
MARK3-212ENST00000558223 EIF4A2Q14240 407 aaKnown RBP8.9□□□□□ -0.98
MARK3-212ENST00000558223 KCNH5Q8NCM2 988 aa8.9□□□□□ -0.98
MARK3-212ENST00000558223 RTF1Q92541 710 aaKnown RBP8.9□□□□□ -0.98
MARK3-212ENST00000558223 TSR2Q969E8 191 aaKnown RBP8.9□□□□□ -0.98
MARK3-212ENST00000558223 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.9□□□□□ -0.988e-7■□□□□ 10.2
MARK3-212ENST00000558223 MAP10Q9P2G4 905 aa8.9□□□□□ -0.98
MARK3-212ENST00000558223 WWC3Q9ULE0 1092 aa8.9□□□□□ -0.98
MARK3-212ENST00000558223 NOB1Q9ULX3 412 aaKnown RBP8.9□□□□□ -0.98
MARK3-212ENST00000558223 CEP170BQ9Y4F5 1589 aaPredicted RBP8.9□□□□□ -0.99
MARK3-212ENST00000558223 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.89□□□□□ -0.99
MARK3-212ENST00000558223 PEX14O75381 377 aa8.89□□□□□ -0.99
MARK3-212ENST00000558223 NR1I2O75469 434 aa8.89□□□□□ -0.99
MARK3-212ENST00000558223 S1PR4O95977 384 aa8.89□□□□□ -0.99
MARK3-212ENST00000558223 HMOX1P09601 288 aa8.89□□□□□ -0.99
MARK3-212ENST00000558223 TRIM27P14373 513 aa8.89□□□□□ -0.99
MARK3-212ENST00000558223 AMPHP49418 695 aa8.89□□□□□ -0.99
MARK3-212ENST00000558223 SULT6B1Q6IMI4 303 aa8.89□□□□□ -0.99
MARK3-212ENST00000558223 ARMC2Q8NEN0 867 aa8.89□□□□□ -0.99
MARK3-212ENST00000558223 GPKOWQ92917 476 aaPredicted RBP eCLIP8.89□□□□□ -0.992e-6■■□□□ 11.9
MARK3-212ENST00000558223 GCC1Q96CN9 775 aa8.89□□□□□ -0.99
MARK3-212ENST00000558223 PHACTR3Q96KR7 559 aa8.89□□□□□ -0.99
MARK3-212ENST00000558223 DDX41Q9UJV9 622 aaKnown RBP8.89□□□□□ -0.99
MARK3-212ENST00000558223 XRN1Q8IZH2 1706 aaKnown RBP8.88□□□□□ -0.99
MARK3-212ENST00000558223 PTPRCP08575 1304 aa8.88□□□□□ -0.99
MARK3-212ENST00000558223 NRKQ7Z2Y5 1582 aa8.88□□□□□ -0.99
MARK3-212ENST00000558223 CHL1O00533 1208 aa8.88□□□□□ -0.99
MARK3-212ENST00000558223 IGHDP01880 384 aa8.88□□□□□ -0.99
MARK3-212ENST00000558223 XRCC5P13010 732 aaKnown RBP8.88□□□□□ -0.99
MARK3-212ENST00000558223 KCNA6P17658 529 aa8.88□□□□□ -0.99
MARK3-212ENST00000558223 RRS1Q15050 365 aaKnown RBP8.88□□□□□ -0.99
MARK3-212ENST00000558223 TWISTNBQ3B726 338 aaPredicted RBP8.88□□□□□ -0.99
MARK3-212ENST00000558223 ZNF394Q53GI3 561 aa8.88□□□□□ -0.99
MARK3-212ENST00000558223 MCF2L2Q86YR7 1114 aa8.88□□□□□ -0.99
MARK3-212ENST00000558223 ITPRIPQ8IWB1 547 aa8.88□□□□□ -0.99
MARK3-212ENST00000558223 PCDH12Q9NPG4 1184 aa8.88□□□□□ -0.99
MARK3-212ENST00000558223 ZBTB40Q9NUA8 1239 aa8.88□□□□□ -0.99
MARK3-212ENST00000558223 SETD1BQ9UPS6 1966 aaKnown RBP8.88□□□□□ -0.99
MARK3-212ENST00000558223 RIMS1Q86UR5 1692 aaKnown RBP8.88□□□□□ -0.99
MARK3-212ENST00000558223 KDRP35968 1356 aa8.87□□□□□ -0.99
MARK3-212ENST00000558223 MAP2P11137 1827 aaKnown RBP8.87□□□□□ -0.99
MARK3-212ENST00000558223 ADH1BP00325 375 aa8.87□□□□□ -0.99
MARK3-212ENST00000558223 RNF20Q5VTR2 975 aa8.87□□□□□ -0.99
MARK3-212ENST00000558223 ZNF787Q6DD87 383 aa8.87□□□□□ -0.99
MARK3-212ENST00000558223 ALG1LQ6GMV1 187 aa8.87□□□□□ -0.99
MARK3-212ENST00000558223 ALKBH2Q6NS38 261 aa8.87□□□□□ -0.99
MARK3-212ENST00000558223 USP48Q86UV5 1035 aa8.87□□□□□ -0.99
MARK3-212ENST00000558223 SMC5Q8IY18 1101 aa8.87□□□□□ -0.99
MARK3-212ENST00000558223 CKAP2LQ8IYA6 745 aa8.87□□□□□ -0.99
MARK3-212ENST00000558223 TSEN2Q8NCE0 465 aaKnown RBP8.87□□□□□ -0.99
MARK3-212ENST00000558223 CCDC85AQ96PX6 553 aaPredicted RBP8.87□□□□□ -0.99
MARK3-212ENST00000558223 PURBQ96QR8 312 aaKnown RBP8.87□□□□□ -0.99
MARK3-212ENST00000558223 MBIPQ9NS73 344 aa8.87□□□□□ -0.99
MARK3-212ENST00000558223 FAN1Q9Y2M0 1017 aa8.87□□□□□ -0.99
MARK3-212ENST00000558223 NCOA3Q9Y6Q9 1424 aa8.87□□□□□ -0.99
MARK3-212ENST00000558223 MAP3K19Q56UN5 1328 aa8.86□□□□□ -0.99
MARK3-212ENST00000558223 IGSF1Q8N6C5 1336 aa8.86□□□□□ -0.99
MARK3-212ENST00000558223 CCDC194A0A1B0GVG4 234 aa8.86□□□□□ -0.99
MARK3-212ENST00000558223 K7ELQ4 463 aaPredicted RBP8.86□□□□□ -0.99
MARK3-212ENST00000558223 PPP1R12AO14974 1030 aaPredicted RBP8.86□□□□□ -0.99
MARK3-212ENST00000558223 DNAJC6O75061 913 aa8.86□□□□□ -0.99
MARK3-212ENST00000558223 RLBP1P12271 317 aa8.86□□□□□ -0.99
MARK3-212ENST00000558223 SLC19A1P41440 591 aa8.86□□□□□ -0.99
MARK3-212ENST00000558223 RGS3P49796 1198 aa8.86□□□□□ -0.99
MARK3-212ENST00000558223 RACK1P63244 317 aaKnown RBP8.86□□□□□ -0.99
MARK3-212ENST00000558223 BECN1Q14457 450 aa8.86□□□□□ -0.99
MARK3-212ENST00000558223 C8orf34Q49A92 452 aa8.86□□□□□ -0.99
MARK3-212ENST00000558223 DZIP3Q86Y13 1208 aaKnown RBP8.86□□□□□ -0.99
MARK3-212ENST00000558223 ANKLE1Q8NAG6 615 aa8.86□□□□□ -0.99
MARK3-212ENST00000558223 ADAM32Q8TC27 787 aa8.86□□□□□ -0.99
MARK3-212ENST00000558223 SPC25Q9HBM1 224 aa8.86□□□□□ -0.99
MARK3-212ENST00000558223 LAS1LQ9Y4W2 734 aaKnown RBP8.86□□□□□ -0.99
MARK3-212ENST00000558223 PCDHGB7Q9Y5F8 929 aa8.86□□□□□ -0.99
MARK3-212ENST00000558223 PCDHGA11Q9Y5H2 935 aa8.86□□□□□ -0.99
MARK3-212ENST00000558223 ZNF142P52746 1687 aaPredicted RBP8.85□□□□□ -0.99
MARK3-212ENST00000558223 GNA15P30679 374 aa8.85□□□□□ -0.99
MARK3-212ENST00000558223 MORN1Q5T089 497 aa8.85□□□□□ -0.99
MARK3-212ENST00000558223 NBPF14Q5TI25 921 aa8.85□□□□□ -0.99
MARK3-212ENST00000558223 LIAT1Q6ZQX7 453 aa8.85□□□□□ -0.99
MARK3-212ENST00000558223 ZBTB33Q86T24 672 aa8.85□□□□□ -0.99
MARK3-212ENST00000558223 ABTB2Q8N961 1025 aa8.85□□□□□ -0.99
MARK3-212ENST00000558223 SLC6A16Q9GZN6 736 aa8.85□□□□□ -0.99
MARK3-212ENST00000558223 NALCNQ8IZF0 1738 aa8.85□□□□□ -0.99
MARK3-212ENST00000558223 ABCC4O15439 1325 aa8.84□□□□□ -0.99
MARK3-212ENST00000558223 M0R2N6 131 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms