RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 GLTPD2A6NH11 291 aa12.81□□□□□ -0.36
LRRC28-204ENST00000558172 RAD17O75943 681 aa12.81□□□□□ -0.36
LRRC28-204ENST00000558172 VIL1P09327 827 aaKnown RBP12.81□□□□□ -0.36
LRRC28-204ENST00000558172 GTF2IP78347 998 aa12.81□□□□□ -0.36
LRRC28-204ENST00000558172 WDR66Q8TBY9 1149 aa12.81□□□□□ -0.36
LRRC28-204ENST00000558172 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.81□□□□□ -0.36
LRRC28-204ENST00000558172 TBC1D22AQ8WUA7 517 aa12.81□□□□□ -0.36
LRRC28-204ENST00000558172 BCL11AQ9H165 835 aa12.81□□□□□ -0.36
LRRC28-204ENST00000558172 TLR7Q9NYK1 1049 aaKnown RBP12.81□□□□□ -0.36
LRRC28-204ENST00000558172 PDS5AQ29RF7 1337 aaKnown RBP12.81□□□□□ -0.36
LRRC28-204ENST00000558172 KDM2BQ8NHM5 1336 aa12.81□□□□□ -0.36
LRRC28-204ENST00000558172 PSMD14O00487 310 aa12.8□□□□□ -0.36
LRRC28-204ENST00000558172 RPS12P25398 132 aaKnown RBP12.8□□□□□ -0.36
LRRC28-204ENST00000558172 MMP14P50281 582 aa12.8□□□□□ -0.36
LRRC28-204ENST00000558172 DACT2Q5SW24 774 aa12.8□□□□□ -0.36
LRRC28-204ENST00000558172 RSBN1LQ6PCB5 846 aaPredicted RBP12.8□□□□□ -0.36
LRRC28-204ENST00000558172 AGBL3Q8NEM8 1001 aa12.8□□□□□ -0.36
LRRC28-204ENST00000558172 FBXW7Q969H0 707 aa12.8□□□□□ -0.36
LRRC28-204ENST00000558172 LNPKQ9C0E8 428 aa12.8□□□□□ -0.36
LRRC28-204ENST00000558172 KCNQ5Q9NR82 932 aa12.8□□□□□ -0.36
LRRC28-204ENST00000558172 ECHDC1Q9NTX5 307 aa12.8□□□□□ -0.36
LRRC28-204ENST00000558172 IQSEC3Q9UPP2 1182 aaPredicted RBP12.8□□□□□ -0.36
LRRC28-204ENST00000558172 GJA3Q9Y6H8 435 aa12.8□□□□□ -0.36
LRRC28-204ENST00000558172 TTC41PQ6P2S7 1318 aa12.8□□□□□ -0.36
LRRC28-204ENST00000558172 ZNF541Q9H0D2 1346 aa12.8□□□□□ -0.36
LRRC28-204ENST00000558172 IGSF3O75054 1194 aa12.79□□□□□ -0.36
LRRC28-204ENST00000558172 ATP5JP18859 108 aa12.79□□□□□ -0.36
LRRC28-204ENST00000558172 C16orf71Q8IYS4 520 aaPredicted RBP12.79□□□□□ -0.36
LRRC28-204ENST00000558172 ZGPATQ8N5A5 531 aaKnown RBP12.79□□□□□ -0.36
LRRC28-204ENST00000558172 SPATA5Q8NB90 893 aa12.79□□□□□ -0.36
LRRC28-204ENST00000558172 DPF2Q92785 391 aa12.79□□□□□ -0.36
LRRC28-204ENST00000558172 HMG20BQ9P0W2 317 aa12.79□□□□□ -0.36
LRRC28-204ENST00000558172 SUGT1Q9Y2Z0 365 aa12.79□□□□□ -0.36
LRRC28-204ENST00000558172 SALL1Q9NSC2 1324 aa12.79□□□□□ -0.36
LRRC28-204ENST00000558172 WDR90Q96KV7 1748 aa12.79□□□□□ -0.36
LRRC28-204ENST00000558172 MYO5AQ9Y4I1 1855 aaKnown RBP12.78□□□□□ -0.36
LRRC28-204ENST00000558172 ERC2O15083 957 aa12.78□□□□□ -0.36
LRRC28-204ENST00000558172 DDNO94850 711 aaPredicted RBP12.78□□□□□ -0.36
LRRC28-204ENST00000558172 MX1P20591 662 aa12.78□□□□□ -0.36
LRRC28-204ENST00000558172 MCAMP43121 646 aa12.78□□□□□ -0.36
LRRC28-204ENST00000558172 CHAF1AQ13111 956 aaPredicted RBP12.78□□□□□ -0.36
LRRC28-204ENST00000558172 RASGRF1Q13972 1273 aa12.78□□□□□ -0.36
LRRC28-204ENST00000558172 MFSD14BQ5SR56 506 aa12.78□□□□□ -0.36
LRRC28-204ENST00000558172 SPTY2D1Q68D10 685 aaPredicted RBP12.77□□□□□ -0.37
LRRC28-204ENST00000558172 L3MBTL3Q96JM7 780 aaPredicted RBP12.77□□□□□ -0.37
LRRC28-204ENST00000558172 STAP2Q9UGK3 403 aa12.77□□□□□ -0.37
LRRC28-204ENST00000558172 MYH7P12883 1935 aa12.77□□□□□ -0.37
LRRC28-204ENST00000558172 SALL3Q9BXA9 1300 aa12.77□□□□□ -0.37
LRRC28-204ENST00000558172 DOCK2Q92608 1830 aa12.76□□□□□ -0.37
LRRC28-204ENST00000558172 AK9Q5TCS8 1911 aa12.76□□□□□ -0.37
LRRC28-204ENST00000558172 MYH2Q9UKX2 1941 aa12.76□□□□□ -0.37
LRRC28-204ENST00000558172 GLRX3O76003 335 aaKnown RBP12.76□□□□□ -0.37
LRRC28-204ENST00000558172 YY1P25490 414 aa12.76□□□□□ -0.37
LRRC28-204ENST00000558172 LMOD1P29536 600 aaPredicted RBP12.76□□□□□ -0.37
LRRC28-204ENST00000558172 GMPSP49915 693 aaPredicted RBP12.76□□□□□ -0.37
LRRC28-204ENST00000558172 SCARF1Q14162 830 aa12.76□□□□□ -0.37
LRRC28-204ENST00000558172 TTF1Q15361 905 aaPredicted RBP12.76□□□□□ -0.37
LRRC28-204ENST00000558172 OGFOD1Q8N543 542 aa12.76□□□□□ -0.37
LRRC28-204ENST00000558172 GMLQ99445 158 aa12.76□□□□□ -0.37
LRRC28-204ENST00000558172 OSBPL3Q9H4L5 887 aa12.76□□□□□ -0.37
LRRC28-204ENST00000558172 HDAC9Q9UKV0 1011 aa12.76□□□□□ -0.37
LRRC28-204ENST00000558172 JAG2Q9Y219 1238 aa12.76□□□□□ -0.37
LRRC28-204ENST00000558172 ZBTB12Q9Y330 459 aaPredicted RBP12.76□□□□□ -0.37
LRRC28-204ENST00000558172 COL1A1P02452 1464 aaPredicted RBP12.76□□□□□ -0.37
LRRC28-204ENST00000558172 IQCA1LA6NCM1 817 aa12.75□□□□□ -0.37
LRRC28-204ENST00000558172 H7C1D1 291 aa12.75□□□□□ -0.37
LRRC28-204ENST00000558172 MAST3O60307 1309 aa12.75□□□□□ -0.37
LRRC28-204ENST00000558172 USP17L8P0C7I0 530 aa12.75□□□□□ -0.37
LRRC28-204ENST00000558172 ZAP70P43403 619 aa12.75□□□□□ -0.37
LRRC28-204ENST00000558172 PDE1AP54750 535 aa12.75□□□□□ -0.37
LRRC28-204ENST00000558172 AOX1Q06278 1338 aa12.75□□□□□ -0.37
LRRC28-204ENST00000558172 CERS5Q8N5B7 392 aa12.75□□□□□ -0.37
LRRC28-204ENST00000558172 OTUD7AQ8TE49 926 aaPredicted RBP12.75□□□□□ -0.37
LRRC28-204ENST00000558172 HAUS7Q99871 368 aa12.75□□□□□ -0.37
LRRC28-204ENST00000558172 MRIQ9BWK5 157 aa12.75□□□□□ -0.37
LRRC28-204ENST00000558172 BOLA2Q9H3K6 86 aa12.75□□□□□ -0.37
LRRC28-204ENST00000558172 SNRKQ9NRH2 765 aa12.75□□□□□ -0.37
LRRC28-204ENST00000558172 GPRC5DQ9NZD1 345 aa12.75□□□□□ -0.37
LRRC28-204ENST00000558172 ABCF2Q9UG63 623 aa12.75□□□□□ -0.37
LRRC28-204ENST00000558172 CNOT7Q9UIV1 285 aaKnown RBP12.75□□□□□ -0.37
LRRC28-204ENST00000558172 CYP2E1P05181 493 aaPredicted RBP12.74□□□□□ -0.37
LRRC28-204ENST00000558172 LDHBP07195 334 aaKnown RBP12.74□□□□□ -0.37
LRRC28-204ENST00000558172 VEGFAP15692 232 aaPredicted RBP12.74□□□□□ -0.37
LRRC28-204ENST00000558172 SCNN1DP51172 638 aa12.74□□□□□ -0.37
LRRC28-204ENST00000558172 HDLBPQ00341 1268 aaKnown RBP12.74□□□□□ -0.37
LRRC28-204ENST00000558172 TMED8Q6PL24 325 aaPredicted RBP12.74□□□□□ -0.37
LRRC28-204ENST00000558172 ERICH6Q7L0X2 663 aa12.74□□□□□ -0.37
LRRC28-204ENST00000558172 KIAA0825Q8IV33 1275 aa12.74□□□□□ -0.37
LRRC28-204ENST00000558172 PLEKHM2Q8IWE5 1019 aa12.74□□□□□ -0.37
LRRC28-204ENST00000558172 PI4K2BQ8TCG2 481 aa12.74□□□□□ -0.37
LRRC28-204ENST00000558172 MXD3Q9BW11 206 aa12.74□□□□□ -0.37
LRRC28-204ENST00000558172 HACL1Q9UJ83 578 aa12.74□□□□□ -0.37
LRRC28-204ENST00000558172 ECM29Q5VYK3 1845 aa12.74□□□□□ -0.37
LRRC28-204ENST00000558172 POLR2AP24928 1970 aaKnown RBP12.73□□□□□ -0.37
LRRC28-204ENST00000558172 ZNF280AP59817 542 aaPredicted RBP12.73□□□□□ -0.37
LRRC28-204ENST00000558172 PI16Q6UXB8 463 aa12.73□□□□□ -0.37
LRRC28-204ENST00000558172 SLF2Q8IX21 1173 aa12.73□□□□□ -0.37
LRRC28-204ENST00000558172 MICALL2Q8IY33 904 aa12.73□□□□□ -0.37
LRRC28-204ENST00000558172 DNAJC2Q99543 621 aaKnown RBP12.73□□□□□ -0.37
LRRC28-204ENST00000558172 ADARB2Q9NS39 739 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms