RNA–Protein interactions for RNA: ENST00000558126.1

LYSMD2-203, Transcript of LysM domain containing 2, humanhuman

TSL 5 BASIC

Gene LYSMD2, Length 775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-203ENST00000558126 ZNF853P0CG23 659 aa13.44□□□□□ -0.26
LYSMD2-203ENST00000558126 ANGEL2Q5VTE6 544 aaKnown RBP13.44□□□□□ -0.26
LYSMD2-203ENST00000558126 RIC3Q7Z5B4 369 aa13.44□□□□□ -0.26
LYSMD2-203ENST00000558126 KHSRPQ92945 711 aaKnown RBP eCLIP13.44□□□□□ -0.26
LYSMD2-203ENST00000558126 MYOZ2Q9NPC6 264 aa13.44□□□□□ -0.26
LYSMD2-203ENST00000558126 SEC31BQ9NQW1 1179 aa13.44□□□□□ -0.26
LYSMD2-203ENST00000558126 LAS1LQ9Y4W2 734 aaKnown RBP13.44□□□□□ -0.26
LYSMD2-203ENST00000558126 XDHP47989 1333 aa13.43□□□□□ -0.26
LYSMD2-203ENST00000558126 USP17L3A6NCW0 530 aa13.43□□□□□ -0.26
LYSMD2-203ENST00000558126 USP17L4A6NCW7 530 aa13.43□□□□□ -0.26
LYSMD2-203ENST00000558126 TM4SF4P48230 202 aa13.43□□□□□ -0.26
LYSMD2-203ENST00000558126 PRPF38BQ5VTL8 546 aaKnown RBP13.43□□□□□ -0.26
LYSMD2-203ENST00000558126 USP17L1Q7RTZ2 530 aa13.43□□□□□ -0.26
LYSMD2-203ENST00000558126 CFHR5Q9BXR6 569 aa13.43□□□□□ -0.26
LYSMD2-203ENST00000558126 PCDHGA4Q9Y5G9 962 aa13.43□□□□□ -0.26
LYSMD2-203ENST00000558126 ASTN2O75129 1339 aaPredicted RBP13.42□□□□□ -0.26
LYSMD2-203ENST00000558126 DDX60Q8IY21 1712 aaKnown RBP13.42□□□□□ -0.26
LYSMD2-203ENST00000558126 NEUROD2Q15784 382 aa13.42□□□□□ -0.26
LYSMD2-203ENST00000558126 RTL5Q5HYW3 569 aaPredicted RBP13.42□□□□□ -0.26
LYSMD2-203ENST00000558126 CWC25Q9NXE8 425 aaPredicted RBP13.42□□□□□ -0.26
LYSMD2-203ENST00000558126 MYBBP1AQ9BQG0 1328 aaKnown RBP13.41□□□□□ -0.26
LYSMD2-203ENST00000558126 ZNF316A6NFI3 1004 aaPredicted RBP13.41□□□□□ -0.26
LYSMD2-203ENST00000558126 SOX10P56693 466 aa13.41□□□□□ -0.26
LYSMD2-203ENST00000558126 ANKRD18AQ8IVF6 992 aa13.41□□□□□ -0.26
LYSMD2-203ENST00000558126 PLPP6Q8IY26 295 aa13.41□□□□□ -0.26
LYSMD2-203ENST00000558126 CCDC146Q8IYE0 955 aa13.41□□□□□ -0.26
LYSMD2-203ENST00000558126 ZNF428Q96B54 188 aa13.41□□□□□ -0.26
LYSMD2-203ENST00000558126 CDC5LQ99459 802 aaKnown RBP13.41□□□□□ -0.26
LYSMD2-203ENST00000558126 METTL22Q9BUU2 404 aaPredicted RBP13.41□□□□□ -0.26
LYSMD2-203ENST00000558126 MBIPQ9NS73 344 aa13.41□□□□□ -0.26
LYSMD2-203ENST00000558126 HPS5Q9UPZ3 1129 aa13.41□□□□□ -0.26
LYSMD2-203ENST00000558126 TAF1P21675 1872 aa13.41□□□□□ -0.26
LYSMD2-203ENST00000558126 POLR2AP24928 1970 aaKnown RBP13.41□□□□□ -0.26
LYSMD2-203ENST00000558126 MYO3BQ8WXR4 1341 aa13.4□□□□□ -0.26
LYSMD2-203ENST00000558126 TNRC18O15417 2968 aaPredicted RBP13.4□□□□□ -0.26
LYSMD2-203ENST00000558126 CALD1Q05682 793 aaKnown RBP13.4□□□□□ -0.26
LYSMD2-203ENST00000558126 WDR43Q15061 677 aaKnown RBP eCLIP13.4□□□□□ -0.26
LYSMD2-203ENST00000558126 MYD88Q99836 296 aa13.4□□□□□ -0.26
LYSMD2-203ENST00000558126 BSDC1Q9NW68 430 aaPredicted RBP13.4□□□□□ -0.26
LYSMD2-203ENST00000558126 IFT57Q9NWB7 429 aa13.4□□□□□ -0.26
LYSMD2-203ENST00000558126 COL4A1P02462 1669 aa13.4□□□□□ -0.26
LYSMD2-203ENST00000558126 PAPPA2Q9BXP8 1791 aa13.4□□□□□ -0.26
LYSMD2-203ENST00000558126 DDX58O95786 925 aaKnown RBP13.39□□□□□ -0.27
LYSMD2-203ENST00000558126 DSG2Q14126 1118 aa13.39□□□□□ -0.27
LYSMD2-203ENST00000558126 DACT2Q5SW24 774 aa13.39□□□□□ -0.27
LYSMD2-203ENST00000558126 STRIP1Q5VSL9 837 aa13.39□□□□□ -0.27
LYSMD2-203ENST00000558126 OGFOD1Q8N543 542 aa13.39□□□□□ -0.27
LYSMD2-203ENST00000558126 COA1Q9GZY4 146 aa13.39□□□□□ -0.27
LYSMD2-203ENST00000558126 PHAXQ9H814 394 aaKnown RBP13.39□□□□□ -0.27
LYSMD2-203ENST00000558126 HDAC9Q9UKV0 1011 aa13.39□□□□□ -0.27
LYSMD2-203ENST00000558126 ADAMTS8Q9UP79 889 aa13.39□□□□□ -0.27
LYSMD2-203ENST00000558126 MED23Q9ULK4 1368 aa13.39□□□□□ -0.27
LYSMD2-203ENST00000558126 SCN9AQ15858 1988 aa13.39□□□□□ -0.27
LYSMD2-203ENST00000558126 GPR25O00155 361 aa13.38□□□□□ -0.27
LYSMD2-203ENST00000558126 NUDT7P0C024 238 aa13.38□□□□□ -0.27
LYSMD2-203ENST00000558126 NF2P35240 595 aa13.38□□□□□ -0.27
LYSMD2-203ENST00000558126 GNAI1P63096 354 aa13.38□□□□□ -0.27
LYSMD2-203ENST00000558126 SREBF2Q12772 1141 aa13.38□□□□□ -0.27
LYSMD2-203ENST00000558126 ZNF296Q8WUU4 475 aaPredicted RBP13.38□□□□□ -0.27
LYSMD2-203ENST00000558126 PTCD2Q8WV60 388 aaKnown RBP13.38□□□□□ -0.27
LYSMD2-203ENST00000558126 CRISPLD2Q9H0B8 497 aa13.38□□□□□ -0.27
LYSMD2-203ENST00000558126 MINPP1Q9UNW1 487 aa13.38□□□□□ -0.27
LYSMD2-203ENST00000558126 LEMD3Q9Y2U8 911 aa13.38□□□□□ -0.27
LYSMD2-203ENST00000558126 AKAP11Q9UKA4 1901 aa13.37□□□□□ -0.27
LYSMD2-203ENST00000558126 UNCXA6NJT0 531 aa13.37□□□□□ -0.27
LYSMD2-203ENST00000558126 WNT10BO00744 389 aa13.37□□□□□ -0.27
LYSMD2-203ENST00000558126 CTSWP56202 376 aa13.37□□□□□ -0.27
LYSMD2-203ENST00000558126 CCDC30Q5VVM6 783 aa13.37□□□□□ -0.27
LYSMD2-203ENST00000558126 FBXO46Q6PJ61 603 aaPredicted RBP13.37□□□□□ -0.27
LYSMD2-203ENST00000558126 MOB2Q70IA6 237 aa13.37□□□□□ -0.27
LYSMD2-203ENST00000558126 TTLL11Q8NHH1 800 aa13.37□□□□□ -0.27
LYSMD2-203ENST00000558126 UBE2Q2LH0YL09 131 aa13.36□□□□□ -0.27
LYSMD2-203ENST00000558126 TBC1D8O95759 1140 aa13.36□□□□□ -0.27
LYSMD2-203ENST00000558126 ALDH1A1P00352 501 aa13.36□□□□□ -0.27
LYSMD2-203ENST00000558126 INHBEP58166 350 aa13.36□□□□□ -0.27
LYSMD2-203ENST00000558126 NBPF9Q3BBW0 867 aa13.36□□□□□ -0.27
LYSMD2-203ENST00000558126 LDLRAD1Q5T700 205 aa13.36□□□□□ -0.27
LYSMD2-203ENST00000558126 KSR2Q6VAB6 950 aa13.36□□□□□ -0.27
LYSMD2-203ENST00000558126 CCT4P50991 539 aaKnown RBP13.35□□□□□ -0.27
LYSMD2-203ENST00000558126 ARMC9Q7Z3E5 817 aa13.35□□□□□ -0.27
LYSMD2-203ENST00000558126 APOBEC3FQ8IUX4 373 aaKnown RBP13.35□□□□□ -0.27
LYSMD2-203ENST00000558126 ZBED3Q96IU2 234 aaPredicted RBP13.35□□□□□ -0.27
LYSMD2-203ENST00000558126 FKTNO75072 461 aa13.34□□□□□ -0.27
LYSMD2-203ENST00000558126 PDE4AP27815 886 aa13.34□□□□□ -0.27
LYSMD2-203ENST00000558126 MAP3K11Q16584 847 aa13.34□□□□□ -0.27
LYSMD2-203ENST00000558126 PLA2G12BQ9BX93 195 aa13.34□□□□□ -0.27
LYSMD2-203ENST00000558126 PI4KAP2A4QPH2 592 aa13.33□□□□□ -0.28
LYSMD2-203ENST00000558126 H7C1W4 665 aa13.33□□□□□ -0.28
LYSMD2-203ENST00000558126 IGKV5-2P06315 115 aa13.33□□□□□ -0.28
LYSMD2-203ENST00000558126 PBX2P40425 430 aa13.33□□□□□ -0.28
LYSMD2-203ENST00000558126 PRAMEF18Q5VWM3 479 aa13.33□□□□□ -0.28
LYSMD2-203ENST00000558126 SPRYD7Q5W111 196 aa13.33□□□□□ -0.28
LYSMD2-203ENST00000558126 TTLL5Q6EMB2 1281 aa13.33□□□□□ -0.28
LYSMD2-203ENST00000558126 PI4KAP1Q8N8J0 262 aa13.33□□□□□ -0.28
LYSMD2-203ENST00000558126 C8orf58Q8NAV2 365 aa13.33□□□□□ -0.28
LYSMD2-203ENST00000558126 MTMR14Q8NCE2 650 aa13.33□□□□□ -0.28
LYSMD2-203ENST00000558126 GCC1Q96CN9 775 aa13.33□□□□□ -0.28
LYSMD2-203ENST00000558126 CCDC85AQ96PX6 553 aaPredicted RBP13.33□□□□□ -0.28
LYSMD2-203ENST00000558126 ANKRD2Q9GZV1 360 aa13.33□□□□□ -0.28
LYSMD2-203ENST00000558126 GREM2Q9H772 168 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms