RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 DHRS1Q96LJ7 313 aa12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 ANKZF1Q9H8Y5 726 aa12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 RAB21Q9UL25 225 aa12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 PPRC1Q5VV67 1664 aaKnown RBP12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 EHBP1L1Q8N3D4 1523 aa12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 ACCSLQ4AC99 568 aa12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 CCDC40Q4G0X9 1142 aa12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 ZKSCAN2Q63HK3 967 aa12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 ARMC9Q7Z3E5 817 aa12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 TMC6Q7Z403 805 aa12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 TAX1BP1Q86VP1 789 aa12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 PARP9Q8IXQ6 854 aa12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 SMCR8Q8TEV9 937 aaPredicted RBP12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 CUL5Q93034 780 aa12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 CCDC102AQ96A19 550 aa12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 RSRC1Q96IZ7 334 aaKnown RBP12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 EHD4Q9H223 541 aa12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 SLC40A1Q9NP59 571 aa12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 TRPC6Q9Y210 931 aa12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 GRIN2DO15399 1336 aa12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 PDLIM1O00151 329 aa12.58□□□□□ -0.39
SEMA4B-204ENST00000558065 FIBPO43427 364 aa12.58□□□□□ -0.39
SEMA4B-204ENST00000558065 RPL13P26373 211 aaKnown RBP12.58□□□□□ -0.39
SEMA4B-204ENST00000558065 IRAK1P51617 712 aa12.58□□□□□ -0.39
SEMA4B-204ENST00000558065 ARHGAP45Q92619 1136 aa12.58□□□□□ -0.39
SEMA4B-204ENST00000558065 ACSBG1Q96GR2 724 aa12.58□□□□□ -0.39
SEMA4B-204ENST00000558065 KAT14Q9H8E8 782 aa12.58□□□□□ -0.39
SEMA4B-204ENST00000558065 UTP6Q9NYH9 597 aaKnown RBP12.58□□□□□ -0.39
SEMA4B-204ENST00000558065 PPP2R3AQ06190 1150 aa12.58□□□□□ -0.4
SEMA4B-204ENST00000558065 CASP8Q14790 479 aa12.58□□□□□ -0.4
SEMA4B-204ENST00000558065 TMEM110Q86TL2 294 aa12.58□□□□□ -0.4
SEMA4B-204ENST00000558065 MEFVO15553 781 aaPredicted RBP12.58□□□□□ -0.4
SEMA4B-204ENST00000558065 ZNF189O75820 626 aaPredicted RBP12.58□□□□□ -0.4
SEMA4B-204ENST00000558065 NBPF7P0C2Y1 421 aaPredicted RBP12.58□□□□□ -0.4
SEMA4B-204ENST00000558065 LRRC23Q53EV4 343 aaPredicted RBP12.58□□□□□ -0.4
SEMA4B-204ENST00000558065 HSP90B2PQ58FF3 399 aa12.58□□□□□ -0.4
SEMA4B-204ENST00000558065 SAPCD2Q86UD0 394 aa12.58□□□□□ -0.4
SEMA4B-204ENST00000558065 ZFAND2BQ8WV99 257 aa12.58□□□□□ -0.4
SEMA4B-204ENST00000558065 DDX19BQ9UMR2 479 aa12.58□□□□□ -0.4
SEMA4B-204ENST00000558065 HDAC6Q9UBN7 1215 aa12.57□□□□□ -0.4
SEMA4B-204ENST00000558065 RIPOR2Q9Y4F9 1068 aa12.57□□□□□ -0.4
SEMA4B-204ENST00000558065 DISP3Q9P2K9 1392 aa12.57□□□□□ -0.4
SEMA4B-204ENST00000558065 FERP16591 822 aa12.57□□□□□ -0.4
SEMA4B-204ENST00000558065 PRPF4BQ13523 1007 aaKnown RBP12.57□□□□□ -0.4
SEMA4B-204ENST00000558065 PLCB4Q15147 1175 aa12.57□□□□□ -0.4
SEMA4B-204ENST00000558065 RBM43Q6ZSC3 357 aaKnown RBP12.57□□□□□ -0.4
SEMA4B-204ENST00000558065 ABCB6Q9NP58 842 aa12.57□□□□□ -0.4
SEMA4B-204ENST00000558065 RTL1A6NKG5 1358 aa12.57□□□□□ -0.4
SEMA4B-204ENST00000558065 CDR1P51861 262 aa12.57□□□□□ -0.4
SEMA4B-204ENST00000558065 HELBQ8NG08 1087 aaPredicted RBP12.57□□□□□ -0.4
SEMA4B-204ENST00000558065 PNKPQ96T60 521 aa12.57□□□□□ -0.4
SEMA4B-204ENST00000558065 STAG3Q9UJ98 1225 aa12.57□□□□□ -0.4
SEMA4B-204ENST00000558065 TPX2Q9ULW0 747 aaKnown RBP12.57□□□□□ -0.4
SEMA4B-204ENST00000558065 ARHGEF12Q9NZN5 1544 aa12.57□□□□□ -0.4
SEMA4B-204ENST00000558065 SUPT6HQ7KZ85 1726 aaKnown RBP12.56□□□□□ -0.4
SEMA4B-204ENST00000558065 LRRIQ3A6PVS8 624 aaPredicted RBP12.56□□□□□ -0.4
SEMA4B-204ENST00000558065 GNAT1P11488 350 aa12.56□□□□□ -0.4
SEMA4B-204ENST00000558065 AARSP49588 968 aaKnown RBP eCLIP12.56□□□□□ -0.4
SEMA4B-204ENST00000558065 IQCF2Q8IXL9 164 aa12.56□□□□□ -0.4
SEMA4B-204ENST00000558065 BCAS4Q8TDM0 211 aa12.56□□□□□ -0.4
SEMA4B-204ENST00000558065 GOLGA1Q92805 767 aa12.56□□□□□ -0.4
SEMA4B-204ENST00000558065 OSBPL5Q9H0X9 879 aaPredicted RBP12.56□□□□□ -0.4
SEMA4B-204ENST00000558065 PZPP20742 1482 aa12.56□□□□□ -0.4
SEMA4B-204ENST00000558065 BIN1O00499 593 aa12.56□□□□□ -0.4
SEMA4B-204ENST00000558065 TRIM27P14373 513 aa12.56□□□□□ -0.4
SEMA4B-204ENST00000558065 ZNF165P49910 485 aa12.56□□□□□ -0.4
SEMA4B-204ENST00000558065 CAMK4Q16566 473 aa12.56□□□□□ -0.4
SEMA4B-204ENST00000558065 BRAPQ7Z569 592 aa12.56□□□□□ -0.4
SEMA4B-204ENST00000558065 GALNT15Q8N3T1 639 aa12.56□□□□□ -0.4
SEMA4B-204ENST00000558065 SHTN1A0MZ66 631 aa12.56□□□□□ -0.4
SEMA4B-204ENST00000558065 IFIT2P09913 472 aaKnown RBP12.56□□□□□ -0.4
SEMA4B-204ENST00000558065 HOMER1Q86YM7 354 aa12.56□□□□□ -0.4
SEMA4B-204ENST00000558065 CCDC13Q8IYE1 715 aa12.56□□□□□ -0.4
SEMA4B-204ENST00000558065 FAM81BQ96LP2 452 aa12.56□□□□□ -0.4
SEMA4B-204ENST00000558065 NACA2Q9H009 215 aa12.56□□□□□ -0.4
SEMA4B-204ENST00000558065 CENPHQ9H3R5 247 aa12.56□□□□□ -0.4
SEMA4B-204ENST00000558065 SAMM50Q9Y512 469 aa12.56□□□□□ -0.4
SEMA4B-204ENST00000558065 PPFIA3O75145 1194 aa12.55□□□□□ -0.4
SEMA4B-204ENST00000558065 PRPF40BQ6NWY9 871 aaKnown RBP12.55□□□□□ -0.4
SEMA4B-204ENST00000558065 CKAP2LQ8IYA6 745 aa12.55□□□□□ -0.4
SEMA4B-204ENST00000558065 TRIM58Q8NG06 486 aa12.55□□□□□ -0.4
SEMA4B-204ENST00000558065 DNMBPQ6XZF7 1577 aa12.55□□□□□ -0.4
SEMA4B-204ENST00000558065 NEK4P51957 841 aa12.55□□□□□ -0.4
SEMA4B-204ENST00000558065 MICALCLQ6ZW33 695 aa12.55□□□□□ -0.4
SEMA4B-204ENST00000558065 YTHDF3Q7Z739 585 aaKnown RBP12.55□□□□□ -0.4
SEMA4B-204ENST00000558065 IGSF22Q8N9C0 903 aa12.55□□□□□ -0.4
SEMA4B-204ENST00000558065 NEK9Q8TD19 979 aa12.55□□□□□ -0.4
SEMA4B-204ENST00000558065 UBA5Q9GZZ9 404 aa12.55□□□□□ -0.4
SEMA4B-204ENST00000558065 NUP62CLQ9H1M0 184 aa12.55□□□□□ -0.4
SEMA4B-204ENST00000558065 DNAJC25Q9H1X3 360 aa12.55□□□□□ -0.4
SEMA4B-204ENST00000558065 B4DLN1 442 aa12.55□□□□□ -0.4
SEMA4B-204ENST00000558065 CSB-PGBD3P0DP91 1061 aa12.55□□□□□ -0.4
SEMA4B-204ENST00000558065 EIF2S2P20042 333 aaKnown RBP12.55□□□□□ -0.4
SEMA4B-204ENST00000558065 CYB5D1Q6P9G0 228 aa12.55□□□□□ -0.4
SEMA4B-204ENST00000558065 TEKT1Q969V4 418 aa12.55□□□□□ -0.4
SEMA4B-204ENST00000558065 CEP170Q5SW79 1584 aa12.55□□□□□ -0.4
SEMA4B-204ENST00000558065 FOXD4Q12950 439 aaPredicted RBP12.54□□□□□ -0.4
SEMA4B-204ENST00000558065 ARMCX5Q6P1M9 558 aa12.54□□□□□ -0.4
SEMA4B-204ENST00000558065 ITPRIPQ8IWB1 547 aa12.54□□□□□ -0.4
SEMA4B-204ENST00000558065 STAG2Q8N3U4 1231 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 212 ms