RNA–Protein interactions for RNA: ENST00000557829.1

CPNE6-204, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-204ENST00000557829 IFFO2Q5TF58 517 aa15.49■□□□□ 0.07
CPNE6-204ENST00000557829 CCDC186Q7Z3E2 898 aa15.49■□□□□ 0.07
CPNE6-204ENST00000557829 UBE3BQ7Z3V4 1068 aa15.49■□□□□ 0.07
CPNE6-204ENST00000557829 BCL2L12Q9HB09 334 aa15.49■□□□□ 0.07
CPNE6-204ENST00000557829 CCNL1Q9UK58 526 aaPredicted RBP15.49■□□□□ 0.07
CPNE6-204ENST00000557829 RCOR1Q9UKL0 485 aa15.49■□□□□ 0.07
CPNE6-204ENST00000557829 NR1I2O75469 434 aa15.49■□□□□ 0.07
CPNE6-204ENST00000557829 STK3Q13188 491 aa15.49■□□□□ 0.07
CPNE6-204ENST00000557829 TCIRG1Q13488 830 aa15.49■□□□□ 0.07
CPNE6-204ENST00000557829 DZIP3Q86Y13 1208 aaKnown RBP15.49■□□□□ 0.07
CPNE6-204ENST00000557829 ANKRD7Q92527 254 aa15.49■□□□□ 0.07
CPNE6-204ENST00000557829 TRIM5Q9C035 493 aa15.49■□□□□ 0.07
CPNE6-204ENST00000557829 CHMP3Q9Y3E7 222 aa15.49■□□□□ 0.07
CPNE6-204ENST00000557829 SPEF2Q9C093 1822 aa15.48■□□□□ 0.07
CPNE6-204ENST00000557829 RREB1Q92766 1687 aa15.48■□□□□ 0.07
CPNE6-204ENST00000557829 A0A087WZG4 1122 aa15.48■□□□□ 0.07
CPNE6-204ENST00000557829 RIOK3O14730 519 aaKnown RBP15.48■□□□□ 0.07
CPNE6-204ENST00000557829 NEMFO60524 1076 aa15.48■□□□□ 0.07
CPNE6-204ENST00000557829 DTNBO60941 627 aa15.48■□□□□ 0.07
CPNE6-204ENST00000557829 TFCP2Q12800 502 aa15.48■□□□□ 0.07
CPNE6-204ENST00000557829 SMIM5Q71RC9 77 aa15.48■□□□□ 0.07
CPNE6-204ENST00000557829 KLHDC4Q8TBB5 520 aa15.48■□□□□ 0.07
CPNE6-204ENST00000557829 ISCA1Q9BUE6 129 aa15.48■□□□□ 0.07
CPNE6-204ENST00000557829 AGXT2Q9BYV1 514 aa15.48■□□□□ 0.07
CPNE6-204ENST00000557829 HELLSQ9NRZ9 838 aa15.48■□□□□ 0.07
CPNE6-204ENST00000557829 COL5A3P25940 1745 aaPredicted RBP15.48■□□□□ 0.07
CPNE6-204ENST00000557829 JAK2O60674 1132 aa15.48■□□□□ 0.07
CPNE6-204ENST00000557829 CYP21A2P08686 494 aa15.48■□□□□ 0.07
CPNE6-204ENST00000557829 CASP7P55210 303 aa15.48■□□□□ 0.07
CPNE6-204ENST00000557829 DHX32Q7L7V1 743 aaKnown RBP15.48■□□□□ 0.07
CPNE6-204ENST00000557829 KBTBD3Q8NAB2 608 aa15.48■□□□□ 0.07
CPNE6-204ENST00000557829 GPR108Q9NPR9 543 aa15.48■□□□□ 0.07
CPNE6-204ENST00000557829 CWC25Q9NXE8 425 aaPredicted RBP15.48■□□□□ 0.07
CPNE6-204ENST00000557829 ZNF831Q5JPB2 1677 aa15.47■□□□□ 0.07
CPNE6-204ENST00000557829 HSP90B1P14625 803 aaKnown RBP15.47■□□□□ 0.07
CPNE6-204ENST00000557829 ZSCAN25Q6NSZ9 544 aa15.47■□□□□ 0.07
CPNE6-204ENST00000557829 GIGYF2Q6Y7W6 1299 aaKnown RBP15.47■□□□□ 0.07
CPNE6-204ENST00000557829 DRC7Q8IY82 874 aa15.47■□□□□ 0.07
CPNE6-204ENST00000557829 DSCC1Q9BVC3 393 aa15.47■□□□□ 0.07
CPNE6-204ENST00000557829 PAXBP1Q9Y5B6 917 aa15.47■□□□□ 0.07
CPNE6-204ENST00000557829 ADD1P35611 737 aaKnown RBP15.46■□□□□ 0.07
CPNE6-204ENST00000557829 SCRN1Q12765 414 aa15.46■□□□□ 0.07
CPNE6-204ENST00000557829 MRFAP1L1Q96HT8 127 aa15.46■□□□□ 0.07
CPNE6-204ENST00000557829 GTPBP4Q9BZE4 634 aaKnown RBP15.46■□□□□ 0.07
CPNE6-204ENST00000557829 CNTNAP4Q9C0A0 1308 aa15.46■□□□□ 0.07
CPNE6-204ENST00000557829 SMTNL1A8MU46 457 aa15.46■□□□□ 0.07
CPNE6-204ENST00000557829 H7C1W4 665 aa15.46■□□□□ 0.07
CPNE6-204ENST00000557829 GPTP24298 496 aa15.46■□□□□ 0.07
CPNE6-204ENST00000557829 EN1Q05925 392 aaPredicted RBP15.46■□□□□ 0.07
CPNE6-204ENST00000557829 DMTNQ08495 405 aa15.46■□□□□ 0.07
CPNE6-204ENST00000557829 IQCB1Q15051 598 aa15.46■□□□□ 0.07
CPNE6-204ENST00000557829 CCDC191Q8NCU4 936 aa15.46■□□□□ 0.07
CPNE6-204ENST00000557829 EDC3Q96F86 508 aaKnown RBP15.46■□□□□ 0.07
CPNE6-204ENST00000557829 ZNF396Q96N95 335 aaPredicted RBP15.46■□□□□ 0.07
CPNE6-204ENST00000557829 LRRC4BQ9NT99 713 aa15.46■□□□□ 0.07
CPNE6-204ENST00000557829 EXOSC10Q01780 885 aaKnown RBP15.45■□□□□ 0.06
CPNE6-204ENST00000557829 STX1AQ16623 288 aa15.45■□□□□ 0.06
CPNE6-204ENST00000557829 FBXL16Q8N461 479 aa15.45■□□□□ 0.06
CPNE6-204ENST00000557829 NSUN7Q8NE18 718 aaKnown RBP15.45■□□□□ 0.06
CPNE6-204ENST00000557829 DNAJC25Q9H1X3 360 aa15.45■□□□□ 0.06
CPNE6-204ENST00000557829 ERVV-1B6SEH8 477 aa15.45■□□□□ 0.06
CPNE6-204ENST00000557829 GOLGA6L19H0YKK7 550 aa15.45■□□□□ 0.06
CPNE6-204ENST00000557829 CAMTA2O94983 1202 aa15.45■□□□□ 0.06
CPNE6-204ENST00000557829 TRIM28Q13263 835 aaKnown RBP15.45■□□□□ 0.06
CPNE6-204ENST00000557829 AMIGO3Q86WK7 504 aa15.45■□□□□ 0.06
CPNE6-204ENST00000557829 DBNDD2Q9BQY9 259 aa15.45■□□□□ 0.06
CPNE6-204ENST00000557829 CLIP2Q9UDT6 1046 aa15.45■□□□□ 0.06
CPNE6-204ENST00000557829 MYH3P11055 1940 aa15.45■□□□□ 0.06
CPNE6-204ENST00000557829 LY75O60449 1722 aa15.44■□□□□ 0.06
CPNE6-204ENST00000557829 PDCL2Q8N4E4 241 aa15.44■□□□□ 0.06
CPNE6-204ENST00000557829 KIF20AO95235 890 aa15.43■□□□□ 0.06
CPNE6-204ENST00000557829 APBA3O96018 575 aa15.43■□□□□ 0.06
CPNE6-204ENST00000557829 RC3H1Q5TC82 1133 aaKnown RBP15.43■□□□□ 0.06
CPNE6-204ENST00000557829 NLRP10Q86W26 655 aa15.43■□□□□ 0.06
CPNE6-204ENST00000557829 TSC1Q92574 1164 aa15.43■□□□□ 0.06
CPNE6-204ENST00000557829 ZNF274Q96GC6 653 aaPredicted RBP15.43■□□□□ 0.06
CPNE6-204ENST00000557829 FGD1P98174 961 aa15.43■□□□□ 0.06
CPNE6-204ENST00000557829 CCAR1Q8IX12 1150 aaKnown RBP15.43■□□□□ 0.06
CPNE6-204ENST00000557829 DNAJC2Q99543 621 aaKnown RBP15.43■□□□□ 0.06
CPNE6-204ENST00000557829 SALL1Q9NSC2 1324 aa15.43■□□□□ 0.06
CPNE6-204ENST00000557829 GNPATO15228 680 aa15.42■□□□□ 0.06
CPNE6-204ENST00000557829 EZH2Q15910 746 aaKnown RBP15.42■□□□□ 0.06
CPNE6-204ENST00000557829 PPP4R3BQ5MIZ7 849 aa15.42■□□□□ 0.06
CPNE6-204ENST00000557829 ZMYM1Q5SVZ6 1142 aa15.42■□□□□ 0.06
CPNE6-204ENST00000557829 CCDC73Q6ZRK6 1079 aa15.42■□□□□ 0.06
CPNE6-204ENST00000557829 CCDC129Q6ZRS4 1044 aa15.42■□□□□ 0.06
CPNE6-204ENST00000557829 STOX1Q6ZVD7 989 aa15.42■□□□□ 0.06
CPNE6-204ENST00000557829 CCDC125Q86Z20 511 aa15.42■□□□□ 0.06
CPNE6-204ENST00000557829 KCND1Q9NSA2 647 aa15.42■□□□□ 0.06
CPNE6-204ENST00000557829 ANO10Q9NW15 660 aa15.42■□□□□ 0.06
CPNE6-204ENST00000557829 NRBP1Q9UHY1 535 aa15.42■□□□□ 0.06
CPNE6-204ENST00000557829 UBN2Q6ZU65 1347 aa15.42■□□□□ 0.06
CPNE6-204ENST00000557829 CTDNEP1O95476 244 aa15.42■□□□□ 0.06
CPNE6-204ENST00000557829 LRMPQ12912 555 aa15.42■□□□□ 0.06
CPNE6-204ENST00000557829 SF3B2Q13435 895 aaKnown RBP15.42■□□□□ 0.06
CPNE6-204ENST00000557829 HSP90AB3PQ58FF7 597 aa15.42■□□□□ 0.06
CPNE6-204ENST00000557829 SYNE4Q8N205 404 aa15.42■□□□□ 0.06
CPNE6-204ENST00000557829 RGS22Q8NE09 1264 aa15.42■□□□□ 0.06
CPNE6-204ENST00000557829 ENGASEQ8NFI3 743 aa15.42■□□□□ 0.06
CPNE6-204ENST00000557829 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms