RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 C6orf229H3BNL8 230 aa12.65□□□□□ -0.38
GABRB3-213ENST00000557765 LDHCP07864 332 aa12.65□□□□□ -0.38
GABRB3-213ENST00000557765 KCNA3P22001 575 aa12.65□□□□□ -0.38
GABRB3-213ENST00000557765 RBM25P49756 843 aaKnown RBP12.65□□□□□ -0.38
GABRB3-213ENST00000557765 MCMDC2Q4G0Z9 681 aa12.65□□□□□ -0.38
GABRB3-213ENST00000557765 RNF20Q5VTR2 975 aa12.65□□□□□ -0.38
GABRB3-213ENST00000557765 CCDC24Q8N4L8 307 aa12.65□□□□□ -0.38
GABRB3-213ENST00000557765 DNAJC2Q99543 621 aaKnown RBP12.65□□□□□ -0.38
GABRB3-213ENST00000557765 CD209Q9NNX6 404 aa12.65□□□□□ -0.38
GABRB3-213ENST00000557765 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.65□□□□□ -0.38
GABRB3-213ENST00000557765 G3V3G9 751 aa12.64□□□□□ -0.39
GABRB3-213ENST00000557765 GOLIM4O00461 696 aa12.64□□□□□ -0.39
GABRB3-213ENST00000557765 CYP2E1P05181 493 aaPredicted RBP12.64□□□□□ -0.39
GABRB3-213ENST00000557765 DPEP1P16444 411 aa12.64□□□□□ -0.39
GABRB3-213ENST00000557765 PLCG2P16885 1265 aa12.64□□□□□ -0.39
GABRB3-213ENST00000557765 ADORA1P30542 326 aa12.64□□□□□ -0.39
GABRB3-213ENST00000557765 BCAMP50895 628 aa12.64□□□□□ -0.39
GABRB3-213ENST00000557765 HDLBPQ00341 1268 aaKnown RBP12.64□□□□□ -0.39
GABRB3-213ENST00000557765 ZMYM1Q5SVZ6 1142 aa12.64□□□□□ -0.39
GABRB3-213ENST00000557765 DCAF8Q5TAQ9 597 aa12.64□□□□□ -0.39
GABRB3-213ENST00000557765 PDGFDQ9GZP0 370 aaPredicted RBP12.64□□□□□ -0.39
GABRB3-213ENST00000557765 CTNNA3Q9UI47 895 aa12.64□□□□□ -0.39
GABRB3-213ENST00000557765 ATF5Q9Y2D1 282 aaPredicted RBP12.64□□□□□ -0.39
GABRB3-213ENST00000557765 AKAP11Q9UKA4 1901 aa12.64□□□□□ -0.39
GABRB3-213ENST00000557765 KIAA1551Q9HCM1 1747 aa12.63□□□□□ -0.39
GABRB3-213ENST00000557765 DOCK2Q92608 1830 aa12.63□□□□□ -0.39
GABRB3-213ENST00000557765 ZAP70P43403 619 aa12.63□□□□□ -0.39
GABRB3-213ENST00000557765 STRIP1Q5VSL9 837 aa12.63□□□□□ -0.39
GABRB3-213ENST00000557765 GIMAP6Q6P9H5 292 aa12.63□□□□□ -0.39
GABRB3-213ENST00000557765 ERICH6Q7L0X2 663 aa12.63□□□□□ -0.39
GABRB3-213ENST00000557765 FAM163AQ96GL9 167 aaPredicted RBP12.63□□□□□ -0.39
GABRB3-213ENST00000557765 DSCC1Q9BVC3 393 aa12.63□□□□□ -0.39
GABRB3-213ENST00000557765 LRP2BPQ9P2M1 347 aa12.63□□□□□ -0.39
GABRB3-213ENST00000557765 POLLQ9UGP5 575 aa12.63□□□□□ -0.39
GABRB3-213ENST00000557765 BRCA1P38398 1863 aaKnown RBP12.63□□□□□ -0.39
GABRB3-213ENST00000557765 CHRNA5P30532 468 aa12.62□□□□□ -0.39
GABRB3-213ENST00000557765 ADD2P35612 726 aa12.62□□□□□ -0.39
GABRB3-213ENST00000557765 GYG1P46976 350 aa12.62□□□□□ -0.39
GABRB3-213ENST00000557765 KRT32Q14532 448 aa12.62□□□□□ -0.39
GABRB3-213ENST00000557765 TBC1D32Q96NH3 1257 aa12.62□□□□□ -0.39
GABRB3-213ENST00000557765 ARFGEF1Q9Y6D6 1849 aa12.62□□□□□ -0.39
GABRB3-213ENST00000557765 MAST2Q6P0Q8 1798 aa12.61□□□□□ -0.39
GABRB3-213ENST00000557765 BAG3O95817 575 aa12.61□□□□□ -0.39
GABRB3-213ENST00000557765 LDHBP07195 334 aaKnown RBP12.61□□□□□ -0.39
GABRB3-213ENST00000557765 PCP11498 1178 aaKnown RBP12.61□□□□□ -0.39
GABRB3-213ENST00000557765 ZKSCAN1P17029 563 aaPredicted RBP12.61□□□□□ -0.39
GABRB3-213ENST00000557765 TSGA10IPQ3SY00 556 aa12.61□□□□□ -0.39
GABRB3-213ENST00000557765 SLC9C2Q5TAH2 1124 aa12.61□□□□□ -0.39
GABRB3-213ENST00000557765 TSHZ3Q63HK5 1081 aa12.61□□□□□ -0.39
GABRB3-213ENST00000557765 ILDR2Q71H61 639 aa12.61□□□□□ -0.39
GABRB3-213ENST00000557765 DDRGK1Q96HY6 314 aa12.61□□□□□ -0.39
GABRB3-213ENST00000557765 NOL10Q9BSC4 688 aaKnown RBP12.61□□□□□ -0.39
GABRB3-213ENST00000557765 C22orf23Q9BZE7 217 aa12.61□□□□□ -0.39
GABRB3-213ENST00000557765 TAOK3Q9H2K8 898 aa12.61□□□□□ -0.39
GABRB3-213ENST00000557765 U3KPZ7 1027 aaPredicted RBP12.61□□□□□ -0.39
GABRB3-213ENST00000557765 CCDC171Q6TFL3 1326 aa12.61□□□□□ -0.39
GABRB3-213ENST00000557765 ZC3H4Q9UPT8 1303 aaKnown RBP12.61□□□□□ -0.39
GABRB3-213ENST00000557765 MYH13Q9UKX3 1938 aa12.6□□□□□ -0.39
GABRB3-213ENST00000557765 TAF1P21675 1872 aa12.6□□□□□ -0.39
GABRB3-213ENST00000557765 A0A0G2JLW4 131 aa12.6□□□□□ -0.39
GABRB3-213ENST00000557765 SOCS7O14512 581 aa12.6□□□□□ -0.39
GABRB3-213ENST00000557765 IDH1O75874 414 aaKnown RBP12.6□□□□□ -0.39
GABRB3-213ENST00000557765 ANP32AP39687 249 aaKnown RBP12.6□□□□□ -0.39
GABRB3-213ENST00000557765 ALX1Q15699 326 aa12.6□□□□□ -0.39
GABRB3-213ENST00000557765 CWC27Q6UX04 472 aaKnown RBP12.6□□□□□ -0.39
GABRB3-213ENST00000557765 MAP4K1Q92918 833 aa12.6□□□□□ -0.39
GABRB3-213ENST00000557765 USP26Q9BXU7 913 aa12.6□□□□□ -0.39
GABRB3-213ENST00000557765 NACAP1Q9BZK3 213 aa12.6□□□□□ -0.39
GABRB3-213ENST00000557765 COL4A1P02462 1669 aa12.6□□□□□ -0.39
GABRB3-213ENST00000557765 SLX4Q8IY92 1834 aa12.6□□□□□ -0.39
GABRB3-213ENST00000557765 MYH7P12883 1935 aa12.59□□□□□ -0.39
GABRB3-213ENST00000557765 PSDA5PKW4 1024 aaPredicted RBP12.59□□□□□ -0.39
GABRB3-213ENST00000557765 HMGB1P09429 215 aaKnown RBP12.59□□□□□ -0.39
GABRB3-213ENST00000557765 PDE6AP16499 860 aa12.59□□□□□ -0.39
GABRB3-213ENST00000557765 MCM2P49736 904 aa12.59□□□□□ -0.39
GABRB3-213ENST00000557765 SCARF1Q14162 830 aa12.59□□□□□ -0.39
GABRB3-213ENST00000557765 NAA16Q6N069 864 aaPredicted RBP12.59□□□□□ -0.39
GABRB3-213ENST00000557765 JDP2Q8WYK2 163 aa12.59□□□□□ -0.39
GABRB3-213ENST00000557765 AIDAQ96BJ3 306 aa12.59□□□□□ -0.39
GABRB3-213ENST00000557765 CHMP4CQ96CF2 233 aa12.59□□□□□ -0.39
GABRB3-213ENST00000557765 ANO2Q9NQ90 1003 aa12.59□□□□□ -0.39
GABRB3-213ENST00000557765 PPP1R1BQ9UD71 204 aaPredicted RBP12.59□□□□□ -0.39
GABRB3-213ENST00000557765 USP17L3A6NCW0 530 aa12.58□□□□□ -0.4
GABRB3-213ENST00000557765 USP17L4A6NCW7 530 aa12.58□□□□□ -0.4
GABRB3-213ENST00000557765 C21orf2O43822 256 aa12.58□□□□□ -0.4
GABRB3-213ENST00000557765 NPM3O75607 178 aaKnown RBP12.58□□□□□ -0.4
GABRB3-213ENST00000557765 RPS12P25398 132 aaKnown RBP12.58□□□□□ -0.4
GABRB3-213ENST00000557765 PSMA5P28066 241 aa12.58□□□□□ -0.4
GABRB3-213ENST00000557765 HSPA4P34932 840 aa12.58□□□□□ -0.4
GABRB3-213ENST00000557765 PPP4CP60510 307 aa12.58□□□□□ -0.4
GABRB3-213ENST00000557765 NMIQ13287 307 aaPredicted RBP12.58□□□□□ -0.4
GABRB3-213ENST00000557765 CCDC88AQ3V6T2 1871 aa12.58□□□□□ -0.4
GABRB3-213ENST00000557765 TTLL5Q6EMB2 1281 aa12.58□□□□□ -0.4
GABRB3-213ENST00000557765 HHIPL2Q6UWX4 724 aa12.58□□□□□ -0.4
GABRB3-213ENST00000557765 USP17L1Q7RTZ2 530 aa12.58□□□□□ -0.4
GABRB3-213ENST00000557765 SKAP1Q86WV1 359 aa12.58□□□□□ -0.4
GABRB3-213ENST00000557765 DZIP1Q86YF9 867 aaKnown RBP12.58□□□□□ -0.4
GABRB3-213ENST00000557765 AGBL3Q8NEM8 1001 aa12.58□□□□□ -0.4
GABRB3-213ENST00000557765 KCNB2Q92953 911 aa12.58□□□□□ -0.4
GABRB3-213ENST00000557765 NSUN4Q96CB9 384 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms