RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 RAD17O75943 681 aa14.39□□□□□ -0.11
LINC00648-204ENST00000557749 CASP7P55210 303 aa14.39□□□□□ -0.11
LINC00648-204ENST00000557749 CCDC57Q2TAC2 916 aa14.39□□□□□ -0.11
LINC00648-204ENST00000557749 DNAJC5GQ8N7S2 189 aa14.39□□□□□ -0.11
LINC00648-204ENST00000557749 JARID2Q92833 1246 aaPredicted RBP14.39□□□□□ -0.11
LINC00648-204ENST00000557749 MINPP1Q9UNW1 487 aa14.39□□□□□ -0.11
LINC00648-204ENST00000557749 ZNF609O15014 1411 aa14.39□□□□□ -0.11
LINC00648-204ENST00000557749 CEP350Q5VT06 3117 aa14.38□□□□□ -0.11
LINC00648-204ENST00000557749 SPDYE16A6NNV3 312 aaPredicted RBP14.38□□□□□ -0.11
LINC00648-204ENST00000557749 F6X3S4 739 aa14.38□□□□□ -0.11
LINC00648-204ENST00000557749 EPS15P42566 896 aa14.38□□□□□ -0.11
LINC00648-204ENST00000557749 KCNJ4P48050 445 aa14.38□□□□□ -0.11
LINC00648-204ENST00000557749 FAM161AQ3B820 660 aa14.38□□□□□ -0.11
LINC00648-204ENST00000557749 TAF7LQ5H9L4 462 aa14.38□□□□□ -0.11
LINC00648-204ENST00000557749 DIEXFQ68CQ4 756 aaKnown RBP14.38□□□□□ -0.11
LINC00648-204ENST00000557749 MRPL50Q8N5N7 158 aaKnown RBP14.38□□□□□ -0.11
LINC00648-204ENST00000557749 JMYQ8N9B5 988 aa14.38□□□□□ -0.11
LINC00648-204ENST00000557749 DBNDD1Q9H9R9 158 aa14.38□□□□□ -0.11
LINC00648-204ENST00000557749 MYO3BQ8WXR4 1341 aa14.38□□□□□ -0.11
LINC00648-204ENST00000557749 YDJCA8MPS7 323 aa14.37□□□□□ -0.11
LINC00648-204ENST00000557749 ITGBL1O95965 494 aaPredicted RBP14.37□□□□□ -0.11
LINC00648-204ENST00000557749 MLLT3P42568 568 aaPredicted RBP14.37□□□□□ -0.11
LINC00648-204ENST00000557749 CCT4P50991 539 aaKnown RBP14.37□□□□□ -0.11
LINC00648-204ENST00000557749 AGBL3Q8NEM8 1001 aa14.37□□□□□ -0.11
LINC00648-204ENST00000557749 COA1Q9GZY4 146 aa14.37□□□□□ -0.11
LINC00648-204ENST00000557749 SMC4Q9NTJ3 1288 aa14.37□□□□□ -0.11
LINC00648-204ENST00000557749 CNOT7Q9UIV1 285 aaKnown RBP14.37□□□□□ -0.11
LINC00648-204ENST00000557749 CHMP3Q9Y3E7 222 aa14.37□□□□□ -0.11
LINC00648-204ENST00000557749 PSMD14O00487 310 aa14.36□□□□□ -0.11
LINC00648-204ENST00000557749 VIL1P09327 827 aaKnown RBP14.36□□□□□ -0.11
LINC00648-204ENST00000557749 MAP1SQ66K74 1059 aaPredicted RBP14.36□□□□□ -0.11
LINC00648-204ENST00000557749 SLC51AQ86UW1 340 aa14.36□□□□□ -0.11
LINC00648-204ENST00000557749 TRMT2AQ8IZ69 625 aaKnown RBP14.36□□□□□ -0.11
LINC00648-204ENST00000557749 SSH1Q8WYL5 1049 aa14.36□□□□□ -0.11
LINC00648-204ENST00000557749 UTYO14607 1347 aa14.36□□□□□ -0.11
LINC00648-204ENST00000557749 KIF16BQ96L93 1317 aa14.36□□□□□ -0.11
LINC00648-204ENST00000557749 USP17L3A6NCW0 530 aa14.35□□□□□ -0.11
LINC00648-204ENST00000557749 USP17L4A6NCW7 530 aa14.35□□□□□ -0.11
LINC00648-204ENST00000557749 BRPF1P55201 1214 aaPredicted RBP14.35□□□□□ -0.11
LINC00648-204ENST00000557749 USP17L1Q7RTZ2 530 aa14.35□□□□□ -0.11
LINC00648-204ENST00000557749 API5Q9BZZ5 524 aaKnown RBP14.35□□□□□ -0.11
LINC00648-204ENST00000557749 PGAP2Q9UHJ9 254 aa14.35□□□□□ -0.11
LINC00648-204ENST00000557749 ZNF804BA4D1E1 1349 aa14.35□□□□□ -0.11
LINC00648-204ENST00000557749 EMP3P54852 163 aa14.34□□□□□ -0.11
LINC00648-204ENST00000557749 FOXO4P98177 505 aa14.34□□□□□ -0.11
LINC00648-204ENST00000557749 RSBN1LQ6PCB5 846 aaPredicted RBP14.34□□□□□ -0.11
LINC00648-204ENST00000557749 LMBR1LQ6UX01 489 aa14.34□□□□□ -0.11
LINC00648-204ENST00000557749 CDC37L1Q7L3B6 337 aa14.34□□□□□ -0.11
LINC00648-204ENST00000557749 OGFOD1Q8N543 542 aa14.34□□□□□ -0.11
LINC00648-204ENST00000557749 CHRNDQ07001 517 aa14.33□□□□□ -0.12
LINC00648-204ENST00000557749 STRIP1Q5VSL9 837 aa14.33□□□□□ -0.12
LINC00648-204ENST00000557749 LDHAL6AQ6ZMR3 332 aa14.33□□□□□ -0.12
LINC00648-204ENST00000557749 C15orf52Q6ZUT6 534 aaKnown RBP14.33□□□□□ -0.12
LINC00648-204ENST00000557749 CNNM1Q9NRU3 951 aa14.33□□□□□ -0.12
LINC00648-204ENST00000557749 CNTNAP1P78357 1384 aa14.33□□□□□ -0.12
LINC00648-204ENST00000557749 COL4A1P02462 1669 aa14.33□□□□□ -0.12
LINC00648-204ENST00000557749 PSME4Q14997 1843 aa14.32□□□□□ -0.12
LINC00648-204ENST00000557749 SPEF2Q9C093 1822 aa14.32□□□□□ -0.12
LINC00648-204ENST00000557749 TESPA1A2RU30 521 aaPredicted RBP14.32□□□□□ -0.12
LINC00648-204ENST00000557749 IPO8O15397 1037 aaKnown RBP14.32□□□□□ -0.12
LINC00648-204ENST00000557749 USP17L8P0C7I0 530 aa14.32□□□□□ -0.12
LINC00648-204ENST00000557749 ECE1P42892 770 aa14.32□□□□□ -0.12
LINC00648-204ENST00000557749 FOSBP53539 338 aa14.32□□□□□ -0.12
LINC00648-204ENST00000557749 HTRA3P83110 453 aa14.32□□□□□ -0.12
LINC00648-204ENST00000557749 ZNF804AQ7Z570 1209 aa14.32□□□□□ -0.12
LINC00648-204ENST00000557749 DDX12PQ92771 950 aa14.32□□□□□ -0.12
LINC00648-204ENST00000557749 DCPSQ96C86 337 aaKnown RBP14.32□□□□□ -0.12
LINC00648-204ENST00000557749 CDCA7LQ96GN5 454 aa14.32□□□□□ -0.12
LINC00648-204ENST00000557749 ABT1Q9ULW3 272 aaKnown RBP14.32□□□□□ -0.12
LINC00648-204ENST00000557749 PCDHGA10Q9Y5H3 936 aa14.32□□□□□ -0.12
LINC00648-204ENST00000557749 FAM205CA6NFA0 338 aa14.31□□□□□ -0.12
LINC00648-204ENST00000557749 RASSF10A6NK89 507 aa14.31□□□□□ -0.12
LINC00648-204ENST00000557749 KIF4BQ2VIQ3 1234 aa14.31□□□□□ -0.12
LINC00648-204ENST00000557749 ARHGAP45Q92619 1136 aa14.31□□□□□ -0.12
LINC00648-204ENST00000557749 GPR101Q96P66 508 aaPredicted RBP14.31□□□□□ -0.12
LINC00648-204ENST00000557749 HDAC9Q9UKV0 1011 aa14.31□□□□□ -0.12
LINC00648-204ENST00000557749 TRPM7Q96QT4 1865 aa14.3□□□□□ -0.12
LINC00648-204ENST00000557749 ZNF280AP59817 542 aaPredicted RBP14.3□□□□□ -0.12
LINC00648-204ENST00000557749 DEFB115Q30KQ5 88 aa14.3□□□□□ -0.12
LINC00648-204ENST00000557749 RABL6Q3YEC7 729 aaPredicted RBP14.3□□□□□ -0.12
LINC00648-204ENST00000557749 SULF1Q8IWU6 871 aa14.3□□□□□ -0.12
LINC00648-204ENST00000557749 HS3ST6Q96QI5 342 aa14.3□□□□□ -0.12
LINC00648-204ENST00000557749 MROH5Q6ZUA9 1318 aa14.3□□□□□ -0.12
LINC00648-204ENST00000557749 NBPF7P0C2Y1 421 aaPredicted RBP14.29□□□□□ -0.12
LINC00648-204ENST00000557749 VARS2Q5ST30 1063 aaKnown RBP14.29□□□□□ -0.12
LINC00648-204ENST00000557749 TRPM4Q8TD43 1214 aa14.29□□□□□ -0.12
LINC00648-204ENST00000557749 HHIPL1Q96JK4 782 aa14.29□□□□□ -0.12
LINC00648-204ENST00000557749 MKRN1Q9UHC7 482 aaKnown RBP14.29□□□□□ -0.12
LINC00648-204ENST00000557749 PITPNM2Q9BZ72 1349 aa14.29□□□□□ -0.12
LINC00648-204ENST00000557749 UBTFL1P0CB47 393 aaPredicted RBP14.28□□□□□ -0.12
LINC00648-204ENST00000557749 UBE4AQ14139 1066 aa14.28□□□□□ -0.12
LINC00648-204ENST00000557749 SCN9AQ15858 1988 aa14.28□□□□□ -0.12
LINC00648-204ENST00000557749 TBC1D10BQ4KMP7 808 aaPredicted RBP14.28□□□□□ -0.12
LINC00648-204ENST00000557749 KRT26Q7Z3Y9 468 aa14.28□□□□□ -0.12
LINC00648-204ENST00000557749 AIDAQ96BJ3 306 aa14.28□□□□□ -0.12
LINC00648-204ENST00000557749 SUCLG2Q96I99 432 aa14.28□□□□□ -0.12
LINC00648-204ENST00000557749 BICC1Q9H694 974 aaKnown RBP14.28□□□□□ -0.12
LINC00648-204ENST00000557749 CELF2O95319 508 aaKnown RBP14.27□□□□□ -0.13
LINC00648-204ENST00000557749 OSBPP22059 807 aa14.27□□□□□ -0.13
LINC00648-204ENST00000557749 HIRAP54198 1017 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms