RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 VIL1P09327 827 aaKnown RBP17.27■□□□□ 0.36
SUPT16H-208ENST00000557652 NUCB1Q02818 461 aa17.27■□□□□ 0.36
SUPT16H-208ENST00000557652 CXCL9Q07325 125 aa17.27■□□□□ 0.36
SUPT16H-208ENST00000557652 TTLL5Q6EMB2 1281 aa17.27■□□□□ 0.36
SUPT16H-208ENST00000557652 TMED8Q6PL24 325 aaPredicted RBP17.27■□□□□ 0.36
SUPT16H-208ENST00000557652 DBNDD2Q9BQY9 259 aa17.27■□□□□ 0.36
SUPT16H-208ENST00000557652 TTC41PQ6P2S7 1318 aa17.26■□□□□ 0.35
SUPT16H-208ENST00000557652 SALL1Q9NSC2 1324 aa17.26■□□□□ 0.35
SUPT16H-208ENST00000557652 UTRNP46939 3433 aa17.26■□□□□ 0.35
SUPT16H-208ENST00000557652 ADORA1P30542 326 aa17.26■□□□□ 0.35
SUPT16H-208ENST00000557652 PHKA1P46020 1223 aa17.26■□□□□ 0.35
SUPT16H-208ENST00000557652 TTC39AQ5SRH9 613 aa17.26■□□□□ 0.35
SUPT16H-208ENST00000557652 CHD1LQ86WJ1 897 aa17.26■□□□□ 0.35
SUPT16H-208ENST00000557652 DPF2Q92785 391 aa17.26■□□□□ 0.35
SUPT16H-208ENST00000557652 L3MBTL3Q96JM7 780 aaPredicted RBP17.26■□□□□ 0.35
SUPT16H-208ENST00000557652 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.26■□□□□ 0.35
SUPT16H-208ENST00000557652 ERC2O15083 957 aa17.25■□□□□ 0.35
SUPT16H-208ENST00000557652 CCDC8Q9H0W5 538 aaPredicted RBP17.25■□□□□ 0.35
SUPT16H-208ENST00000557652 AOX1Q06278 1338 aa17.24■□□□□ 0.35
SUPT16H-208ENST00000557652 MYH7P12883 1935 aa17.24■□□□□ 0.35
SUPT16H-208ENST00000557652 ATP5JP18859 108 aa17.24■□□□□ 0.35
SUPT16H-208ENST00000557652 DACT2Q5SW24 774 aa17.24■□□□□ 0.35
SUPT16H-208ENST00000557652 RSBN1LQ6PCB5 846 aaPredicted RBP17.24■□□□□ 0.35
SUPT16H-208ENST00000557652 ECHDC1Q9NTX5 307 aa17.24■□□□□ 0.35
SUPT16H-208ENST00000557652 MAST3O60307 1309 aa17.23■□□□□ 0.35
SUPT16H-208ENST00000557652 ZNF541Q9H0D2 1346 aa17.23■□□□□ 0.35
SUPT16H-208ENST00000557652 IQCA1LA6NCM1 817 aa17.23■□□□□ 0.35
SUPT16H-208ENST00000557652 PSMD14O00487 310 aa17.23■□□□□ 0.35
SUPT16H-208ENST00000557652 RAD17O75943 681 aa17.23■□□□□ 0.35
SUPT16H-208ENST00000557652 GTF2IP78347 998 aa17.23■□□□□ 0.35
SUPT16H-208ENST00000557652 SPTY2D1Q68D10 685 aaPredicted RBP17.23■□□□□ 0.35
SUPT16H-208ENST00000557652 DOCK2Q92608 1830 aa17.23■□□□□ 0.35
SUPT16H-208ENST00000557652 SMARCA5O60264 1052 aaPredicted RBP17.22■□□□□ 0.35
SUPT16H-208ENST00000557652 MX1P20591 662 aa17.22■□□□□ 0.35
SUPT16H-208ENST00000557652 RASGRF1Q13972 1273 aa17.22■□□□□ 0.35
SUPT16H-208ENST00000557652 TTF1Q15361 905 aaPredicted RBP17.22■□□□□ 0.35
SUPT16H-208ENST00000557652 TICAM2Q86XR7 235 aa17.22■□□□□ 0.35
SUPT16H-208ENST00000557652 SPATA5Q8NB90 893 aa17.22■□□□□ 0.35
SUPT16H-208ENST00000557652 MRIQ9BWK5 157 aa17.22■□□□□ 0.35
SUPT16H-208ENST00000557652 STAP2Q9UGK3 403 aa17.22■□□□□ 0.35
SUPT16H-208ENST00000557652 MAST2Q6P0Q8 1798 aa17.21■□□□□ 0.35
SUPT16H-208ENST00000557652 GLRX3O76003 335 aaKnown RBP17.21■□□□□ 0.35
SUPT16H-208ENST00000557652 LMOD1P29536 600 aaPredicted RBP17.21■□□□□ 0.35
SUPT16H-208ENST00000557652 HDLBPQ00341 1268 aaKnown RBP17.21■□□□□ 0.35
SUPT16H-208ENST00000557652 MFSD14BQ5SR56 506 aa17.21■□□□□ 0.35
SUPT16H-208ENST00000557652 GMLQ99445 158 aa17.21■□□□□ 0.35
SUPT16H-208ENST00000557652 OSBPL3Q9H4L5 887 aa17.21■□□□□ 0.35
SUPT16H-208ENST00000557652 TLR7Q9NYK1 1049 aaKnown RBP17.21■□□□□ 0.35
SUPT16H-208ENST00000557652 HDAC9Q9UKV0 1011 aa17.21■□□□□ 0.35
SUPT16H-208ENST00000557652 AK9Q5TCS8 1911 aa17.21■□□□□ 0.35
SUPT16H-208ENST00000557652 MYH2Q9UKX2 1941 aa17.21■□□□□ 0.35
SUPT16H-208ENST00000557652 ECM29Q5VYK3 1845 aa17.21■□□□□ 0.35
SUPT16H-208ENST00000557652 SALL3Q9BXA9 1300 aa17.21■□□□□ 0.34
SUPT16H-208ENST00000557652 MCAMP43121 646 aa17.2■□□□□ 0.34
SUPT16H-208ENST00000557652 OGFOD1Q8N543 542 aa17.2■□□□□ 0.34
SUPT16H-208ENST00000557652 LNPKQ9C0E8 428 aa17.2■□□□□ 0.34
SUPT16H-208ENST00000557652 HMG20BQ9P0W2 317 aa17.2■□□□□ 0.34
SUPT16H-208ENST00000557652 COL1A1P02452 1464 aaPredicted RBP17.19■□□□□ 0.34
SUPT16H-208ENST00000557652 MYO5AQ9Y4I1 1855 aaKnown RBP17.19■□□□□ 0.34
SUPT16H-208ENST00000557652 B4GALNT3Q6L9W6 998 aa17.19■□□□□ 0.34
SUPT16H-208ENST00000557652 SLF2Q8IX21 1173 aa17.19■□□□□ 0.34
SUPT16H-208ENST00000557652 HAUS7Q99871 368 aa17.19■□□□□ 0.34
SUPT16H-208ENST00000557652 KCNQ5Q9NR82 932 aa17.19■□□□□ 0.34
SUPT16H-208ENST00000557652 GPRC5DQ9NZD1 345 aa17.19■□□□□ 0.34
SUPT16H-208ENST00000557652 GJA3Q9Y6H8 435 aa17.19■□□□□ 0.34
SUPT16H-208ENST00000557652 H7C1D1 291 aa17.18■□□□□ 0.34
SUPT16H-208ENST00000557652 DDNO94850 711 aaPredicted RBP17.18■□□□□ 0.34
SUPT16H-208ENST00000557652 USP17L8P0C7I0 530 aa17.18■□□□□ 0.34
SUPT16H-208ENST00000557652 VEGFAP15692 232 aaPredicted RBP17.18■□□□□ 0.34
SUPT16H-208ENST00000557652 YY1P25490 414 aa17.18■□□□□ 0.34
SUPT16H-208ENST00000557652 GMPSP49915 693 aaPredicted RBP17.18■□□□□ 0.34
SUPT16H-208ENST00000557652 PDE1AP54750 535 aa17.18■□□□□ 0.34
SUPT16H-208ENST00000557652 ZNF280AP59817 542 aaPredicted RBP17.18■□□□□ 0.34
SUPT16H-208ENST00000557652 CHAF1AQ13111 956 aaPredicted RBP17.18■□□□□ 0.34
SUPT16H-208ENST00000557652 FBXW7Q969H0 707 aa17.18■□□□□ 0.34
SUPT16H-208ENST00000557652 HACL1Q9UJ83 578 aa17.18■□□□□ 0.34
SUPT16H-208ENST00000557652 IQSEC3Q9UPP2 1182 aaPredicted RBP17.18■□□□□ 0.34
SUPT16H-208ENST00000557652 LDHBP07195 334 aaKnown RBP17.17■□□□□ 0.34
SUPT16H-208ENST00000557652 SCNN1DP51172 638 aa17.17■□□□□ 0.34
SUPT16H-208ENST00000557652 LRRFIP1Q32MZ4 808 aaKnown RBP17.17■□□□□ 0.34
SUPT16H-208ENST00000557652 PNMA8AQ86V59 439 aaPredicted RBP17.17■□□□□ 0.34
SUPT16H-208ENST00000557652 SERPINA10Q9UK55 444 aa17.17■□□□□ 0.34
SUPT16H-208ENST00000557652 ERICH6Q7L0X2 663 aa17.16■□□□□ 0.34
SUPT16H-208ENST00000557652 MTMR14Q8NCE2 650 aa17.16■□□□□ 0.34
SUPT16H-208ENST00000557652 ADARB2Q9NS39 739 aaKnown RBP17.16■□□□□ 0.34
SUPT16H-208ENST00000557652 CNOT7Q9UIV1 285 aaKnown RBP17.16■□□□□ 0.34
SUPT16H-208ENST00000557652 LDHCP07864 332 aa17.15■□□□□ 0.34
SUPT16H-208ENST00000557652 GSTO1P78417 241 aa17.15■□□□□ 0.34
SUPT16H-208ENST00000557652 SCARF1Q14162 830 aa17.15■□□□□ 0.34
SUPT16H-208ENST00000557652 HHIPL2Q6UWX4 724 aa17.15■□□□□ 0.34
SUPT16H-208ENST00000557652 USP50Q70EL3 339 aaPredicted RBP17.15■□□□□ 0.34
SUPT16H-208ENST00000557652 CERS3Q8IU89 383 aa17.15■□□□□ 0.34
SUPT16H-208ENST00000557652 PLEKHM2Q8IWE5 1019 aa17.15■□□□□ 0.34
SUPT16H-208ENST00000557652 CERS5Q8N5B7 392 aa17.15■□□□□ 0.34
SUPT16H-208ENST00000557652 PI4K2BQ8TCG2 481 aa17.15■□□□□ 0.34
SUPT16H-208ENST00000557652 PAG1Q9NWQ8 432 aa17.15■□□□□ 0.34
SUPT16H-208ENST00000557652 MAP4K4O95819 1239 aaPredicted RBP17.14■□□□□ 0.33
SUPT16H-208ENST00000557652 CYP2E1P05181 493 aaPredicted RBP17.14■□□□□ 0.33
SUPT16H-208ENST00000557652 ZAP70P43403 619 aa17.14■□□□□ 0.33
SUPT16H-208ENST00000557652 MAP3K12Q12852 859 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms