RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 CASTP20810 708 aaKnown RBP14.91□□□□□ -0.02
SHMT2-233ENST00000557529 HIBADHP31937 336 aaKnown RBP14.91□□□□□ -0.02
SHMT2-233ENST00000557529 PDE6BP35913 854 aa14.91□□□□□ -0.02
SHMT2-233ENST00000557529 SLFNL1Q499Z3 407 aa14.91□□□□□ -0.02
SHMT2-233ENST00000557529 RPAP1Q9BWH6 1393 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-233ENST00000557529 VPS53Q5VIR6 699 aa14.9□□□□□ -0.02
SHMT2-233ENST00000557529 C15orf52Q6ZUT6 534 aaKnown RBP14.9□□□□□ -0.02
SHMT2-233ENST00000557529 RUFY3Q7L099 469 aa14.9□□□□□ -0.02
SHMT2-233ENST00000557529 TTC14Q96N46 770 aa14.9□□□□□ -0.02
SHMT2-233ENST00000557529 ANO8Q9HCE9 1232 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-233ENST00000557529 ZNF532Q9HCE3 1301 aa14.9□□□□□ -0.02
SHMT2-233ENST00000557529 MYH7P12883 1935 aa14.9□□□□□ -0.02
SHMT2-233ENST00000557529 QSER1Q2KHR3 1735 aa14.89□□□□□ -0.03
SHMT2-233ENST00000557529 TCRBV5S4A2TA0A5A2 114 aa14.89□□□□□ -0.03
SHMT2-233ENST00000557529 GPAA1O43292 621 aa14.89□□□□□ -0.03
SHMT2-233ENST00000557529 IGSF3O75054 1194 aa14.89□□□□□ -0.03
SHMT2-233ENST00000557529 NPR1P16066 1061 aa14.89□□□□□ -0.03
SHMT2-233ENST00000557529 ATP2B4P23634 1241 aa14.89□□□□□ -0.03
SHMT2-233ENST00000557529 DDIT3P35638 169 aa14.89□□□□□ -0.03
SHMT2-233ENST00000557529 ADCK5Q3MIX3 580 aa14.89□□□□□ -0.03
SHMT2-233ENST00000557529 TMED8Q6PL24 325 aaPredicted RBP14.89□□□□□ -0.03
SHMT2-233ENST00000557529 BLOC1S2Q6QNY1 142 aa14.89□□□□□ -0.03
SHMT2-233ENST00000557529 TMX3Q96JJ7 454 aa14.89□□□□□ -0.03
SHMT2-233ENST00000557529 PUS7LQ9H0K6 701 aaKnown RBP14.89□□□□□ -0.03
SHMT2-233ENST00000557529 CWC22Q9HCG8 908 aaKnown RBP14.89□□□□□ -0.03
SHMT2-233ENST00000557529 PDRG1Q9NUG6 133 aa14.89□□□□□ -0.03
SHMT2-233ENST00000557529 LRP2BPQ9P2M1 347 aa14.89□□□□□ -0.03
SHMT2-233ENST00000557529 WWC3Q9ULE0 1092 aa14.89□□□□□ -0.03
SHMT2-233ENST00000557529 IRS2Q9Y4H2 1338 aa14.88□□□□□ -0.03
SHMT2-233ENST00000557529 FRAT2O75474 233 aaPredicted RBP14.88□□□□□ -0.03
SHMT2-233ENST00000557529 MAGEB6Q8N7X4 407 aa14.88□□□□□ -0.03
SHMT2-233ENST00000557529 ANP32EQ9BTT0 268 aa14.88□□□□□ -0.03
SHMT2-233ENST00000557529 ALDH8A1Q9H2A2 487 aaPredicted RBP14.88□□□□□ -0.03
SHMT2-233ENST00000557529 PODXL2Q9NZ53 605 aa14.88□□□□□ -0.03
SHMT2-233ENST00000557529 DOCK2Q92608 1830 aa14.88□□□□□ -0.03
SHMT2-233ENST00000557529 WTIPA6NIX2 430 aaPredicted RBP14.87□□□□□ -0.03
SHMT2-233ENST00000557529 CYP21A2P08686 494 aa14.87□□□□□ -0.03
SHMT2-233ENST00000557529 HMGB1P09429 215 aaKnown RBP14.87□□□□□ -0.03
SHMT2-233ENST00000557529 SRGNP10124 158 aa14.87□□□□□ -0.03
SHMT2-233ENST00000557529 ALDH1B1P30837 517 aa14.87□□□□□ -0.03
SHMT2-233ENST00000557529 AK2P54819 239 aa14.87□□□□□ -0.03
SHMT2-233ENST00000557529 GPSM2P81274 684 aa14.87□□□□□ -0.03
SHMT2-233ENST00000557529 CUL4AQ13619 759 aa14.87□□□□□ -0.03
SHMT2-233ENST00000557529 ANKRD1Q15327 319 aa14.87□□□□□ -0.03
SHMT2-233ENST00000557529 MSL1Q68DK7 614 aa14.87□□□□□ -0.03
SHMT2-233ENST00000557529 ZNF804AQ7Z570 1209 aa14.87□□□□□ -0.03
SHMT2-233ENST00000557529 CCDC125Q86Z20 511 aa14.87□□□□□ -0.03
SHMT2-233ENST00000557529 SP8Q8IXZ3 490 aa14.87□□□□□ -0.03
SHMT2-233ENST00000557529 AIDAQ96BJ3 306 aa14.87□□□□□ -0.03
SHMT2-233ENST00000557529 GGA1Q9UJY5 639 aa14.87□□□□□ -0.03
SHMT2-233ENST00000557529 IQSEC3Q9UPP2 1182 aaPredicted RBP14.87□□□□□ -0.03
SHMT2-233ENST00000557529 LIMCH1Q9UPQ0 1083 aa14.87□□□□□ -0.03
SHMT2-233ENST00000557529 PPEF1O14829 653 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-233ENST00000557529 GNAT2P19087 354 aa14.86□□□□□ -0.03
SHMT2-233ENST00000557529 RPS6KB1P23443 525 aa14.86□□□□□ -0.03
SHMT2-233ENST00000557529 KLRK1P26718 216 aa14.86□□□□□ -0.03
SHMT2-233ENST00000557529 IMMTQ16891 758 aaKnown RBP14.86□□□□□ -0.03
SHMT2-233ENST00000557529 INTS4Q96HW7 963 aaKnown RBP14.86□□□□□ -0.03
SHMT2-233ENST00000557529 ZSCAN31Q96LW9 406 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-233ENST00000557529 NEK1Q96PY6 1258 aa14.86□□□□□ -0.03
SHMT2-233ENST00000557529 RAI14Q9P0K7 980 aa14.86□□□□□ -0.03
SHMT2-233ENST00000557529 NSFL1CQ9UNZ2 370 aaKnown RBP14.86□□□□□ -0.03
SHMT2-233ENST00000557529 COL1A1P02452 1464 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-233ENST00000557529 ANKRD31Q8N7Z5 1873 aa14.86□□□□□ -0.03
SHMT2-233ENST00000557529 UFL1O94874 794 aa14.85□□□□□ -0.03
SHMT2-233ENST00000557529 MASTLQ96GX5 879 aa14.85□□□□□ -0.03
SHMT2-233ENST00000557529 STRBPQ96SI9 672 aaKnown RBP14.85□□□□□ -0.03
SHMT2-233ENST00000557529 ABCF2Q9UG63 623 aa14.85□□□□□ -0.03
SHMT2-233ENST00000557529 ATP6V0A2Q9Y487 856 aa14.85□□□□□ -0.03
SHMT2-233ENST00000557529 ZMYM6O95789 1325 aa14.85□□□□□ -0.03
SHMT2-233ENST00000557529 FOXP2O15409 715 aa14.85□□□□□ -0.03
SHMT2-233ENST00000557529 CPA1P15085 419 aa14.85□□□□□ -0.03
SHMT2-233ENST00000557529 ALX1Q15699 326 aa14.85□□□□□ -0.03
SHMT2-233ENST00000557529 SPTY2D1Q68D10 685 aaPredicted RBP14.85□□□□□ -0.03
SHMT2-233ENST00000557529 DEFB132Q7Z7B7 95 aa14.85□□□□□ -0.03
SHMT2-233ENST00000557529 ZGPATQ8N5A5 531 aaKnown RBP14.85□□□□□ -0.03
SHMT2-233ENST00000557529 WDR66Q8TBY9 1149 aa14.85□□□□□ -0.03
SHMT2-233ENST00000557529 TMX4Q9H1E5 349 aaPredicted RBP14.85□□□□□ -0.03
SHMT2-233ENST00000557529 SH2B1Q9NRF2 756 aaPredicted RBP14.85□□□□□ -0.03
SHMT2-233ENST00000557529 FOXD4L1Q9NU39 408 aa14.85□□□□□ -0.03
SHMT2-233ENST00000557529 SALL1Q9NSC2 1324 aa14.84□□□□□ -0.03
SHMT2-233ENST00000557529 PATL2C9JE40 543 aaKnown RBP14.84□□□□□ -0.03
SHMT2-233ENST00000557529 MBD4O95243 580 aa14.84□□□□□ -0.03
SHMT2-233ENST00000557529 FGAP02671 866 aa14.84□□□□□ -0.03
SHMT2-233ENST00000557529 CYP7A1P22680 504 aa14.84□□□□□ -0.03
SHMT2-233ENST00000557529 STYK1Q6J9G0 422 aa14.84□□□□□ -0.03
SHMT2-233ENST00000557529 NOL8Q76FK4 1167 aaKnown RBP14.84□□□□□ -0.03
SHMT2-233ENST00000557529 TXNRD3Q86VQ6 643 aa14.84□□□□□ -0.03
SHMT2-233ENST00000557529 TDRD7Q8NHU6 1098 aaKnown RBP14.84□□□□□ -0.03
SHMT2-233ENST00000557529 TAF6LQ9Y6J9 622 aa14.84□□□□□ -0.03
SHMT2-233ENST00000557529 LRRC37AA6NMS7 1700 aa14.83□□□□□ -0.04
SHMT2-233ENST00000557529 E7EWF7 191 aa14.83□□□□□ -0.04
SHMT2-233ENST00000557529 H0YIN7 160 aa14.83□□□□□ -0.04
SHMT2-233ENST00000557529 ZNF213O14771 459 aa14.83□□□□□ -0.04
SHMT2-233ENST00000557529 APPP05067 770 aa14.83□□□□□ -0.04
SHMT2-233ENST00000557529 NUCB2P80303 420 aa14.83□□□□□ -0.04
SHMT2-233ENST00000557529 CHAF1AQ13111 956 aaPredicted RBP14.83□□□□□ -0.04
SHMT2-233ENST00000557529 NAA16Q6N069 864 aaPredicted RBP14.83□□□□□ -0.04
SHMT2-233ENST00000557529 C2CD5Q86YS7 1000 aa14.83□□□□□ -0.04
SHMT2-233ENST00000557529 TBC1D16Q8TBP0 767 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms