RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 TMEM265A0A087WTH1 108 aa12.5□□□□□ -0.41
NEDD1-211ENST00000557454 ANXA1P04083 346 aa12.5□□□□□ -0.41
NEDD1-211ENST00000557454 CTGFP29279 349 aa12.5□□□□□ -0.41
NEDD1-211ENST00000557454 EIF4A1P60842 406 aaKnown RBP12.5□□□□□ -0.41
NEDD1-211ENST00000557454 RPS8P62241 208 aaKnown RBP12.5□□□□□ -0.41
NEDD1-211ENST00000557454 PROSER3Q2NL68 480 aa12.5□□□□□ -0.41
NEDD1-211ENST00000557454 HSP90AB3PQ58FF7 597 aa12.5□□□□□ -0.41
NEDD1-211ENST00000557454 PODNQ7Z5L7 613 aa12.5□□□□□ -0.41
NEDD1-211ENST00000557454 UNC93B1Q9H1C4 597 aa12.5□□□□□ -0.41
NEDD1-211ENST00000557454 SRRDQ9UH36 339 aa12.5□□□□□ -0.41
NEDD1-211ENST00000557454 TLR2O60603 784 aa12.49□□□□□ -0.41
NEDD1-211ENST00000557454 SGPL1O95470 568 aa12.49□□□□□ -0.41
NEDD1-211ENST00000557454 SYN1P17600 705 aa12.49□□□□□ -0.41
NEDD1-211ENST00000557454 UBXN2AP68543 259 aa12.49□□□□□ -0.41
NEDD1-211ENST00000557454 ANKRD13AQ8IZ07 590 aa12.49□□□□□ -0.41
NEDD1-211ENST00000557454 MAFAQ8NHW3 353 aaPredicted RBP12.49□□□□□ -0.41
NEDD1-211ENST00000557454 SYMPKQ92797 1274 aaKnown RBP12.49□□□□□ -0.41
NEDD1-211ENST00000557454 ZBED3Q96IU2 234 aaPredicted RBP12.49□□□□□ -0.41
NEDD1-211ENST00000557454 TRIM47Q96LD4 638 aa12.49□□□□□ -0.41
NEDD1-211ENST00000557454 TNFRSF10AO00220 468 aa12.48□□□□□ -0.41
NEDD1-211ENST00000557454 USP2O75604 605 aaPredicted RBP12.48□□□□□ -0.41
NEDD1-211ENST00000557454 OSBPP22059 807 aa12.48□□□□□ -0.41
NEDD1-211ENST00000557454 PDIA6Q15084 440 aa12.48□□□□□ -0.41
NEDD1-211ENST00000557454 NBPF12Q5TAG4 269 aaPredicted RBP12.48□□□□□ -0.41
NEDD1-211ENST00000557454 FAM89AQ96GI7 184 aa12.48□□□□□ -0.41
NEDD1-211ENST00000557454 UBE2OQ9C0C9 1292 aaKnown RBP12.48□□□□□ -0.41
NEDD1-211ENST00000557454 ALPK3Q96L96 1907 aa12.47□□□□□ -0.41
NEDD1-211ENST00000557454 MYPNQ86TC9 1320 aa12.47□□□□□ -0.41
NEDD1-211ENST00000557454 MYO3BQ8WXR4 1341 aa12.47□□□□□ -0.41
NEDD1-211ENST00000557454 POTEB2H3BUK9 544 aa12.47□□□□□ -0.41
NEDD1-211ENST00000557454 PSMC4P43686 418 aa12.47□□□□□ -0.41
NEDD1-211ENST00000557454 GTF2A2P52657 109 aa12.47□□□□□ -0.41
NEDD1-211ENST00000557454 SUPT20HL1Q3ZLR7 823 aa12.47□□□□□ -0.41
NEDD1-211ENST00000557454 FAM109BQ6ICB4 259 aaPredicted RBP12.47□□□□□ -0.41
NEDD1-211ENST00000557454 KIAA0825Q8IV33 1275 aa12.47□□□□□ -0.41
NEDD1-211ENST00000557454 DIS3LQ8TF46 1054 aaKnown RBP12.47□□□□□ -0.41
NEDD1-211ENST00000557454 PAWRQ96IZ0 340 aaKnown RBP12.47□□□□□ -0.41
NEDD1-211ENST00000557454 SEC31BQ9NQW1 1179 aa12.47□□□□□ -0.41
NEDD1-211ENST00000557454 PPP2R3BQ9Y5P8 575 aa12.47□□□□□ -0.41
NEDD1-211ENST00000557454 WDHD1O75717 1129 aaPredicted RBP12.46□□□□□ -0.41
NEDD1-211ENST00000557454 TFRCP02786 760 aaKnown RBP12.46□□□□□ -0.41
NEDD1-211ENST00000557454 AIMP1Q12904 312 aaKnown RBP12.46□□□□□ -0.41
NEDD1-211ENST00000557454 RTL5Q5HYW3 569 aaPredicted RBP12.46□□□□□ -0.41
NEDD1-211ENST00000557454 ZNF804BA4D1E1 1349 aa12.45□□□□□ -0.42
NEDD1-211ENST00000557454 XDHP47989 1333 aa12.45□□□□□ -0.42
NEDD1-211ENST00000557454 CLRN2A0PK11 232 aa12.45□□□□□ -0.42
NEDD1-211ENST00000557454 HTATSF1O43719 755 aaKnown RBP12.45□□□□□ -0.42
NEDD1-211ENST00000557454 MAP3K12Q12852 859 aa12.45□□□□□ -0.42
NEDD1-211ENST00000557454 STRIP1Q5VSL9 837 aa12.45□□□□□ -0.42
NEDD1-211ENST00000557454 PNISRQ8TF01 805 aaKnown RBP12.45□□□□□ -0.42
NEDD1-211ENST00000557454 XAGE3Q8WTP9 111 aa12.45□□□□□ -0.42
NEDD1-211ENST00000557454 DEFB118Q96PH6 123 aa12.45□□□□□ -0.42
NEDD1-211ENST00000557454 OTOFQ9HC10 1997 aa12.45□□□□□ -0.42
NEDD1-211ENST00000557454 PIEZO1Q92508 2521 aa12.44□□□□□ -0.42
NEDD1-211ENST00000557454 BTBD19C9JJ37 291 aa12.44□□□□□ -0.42
NEDD1-211ENST00000557454 FMNL1O95466 1100 aaPredicted RBP12.44□□□□□ -0.42
NEDD1-211ENST00000557454 EIF2S2P20042 333 aaKnown RBP12.44□□□□□ -0.42
NEDD1-211ENST00000557454 HOXD10P28358 340 aa12.44□□□□□ -0.42
NEDD1-211ENST00000557454 PRKCZQ05513 592 aa12.44□□□□□ -0.42
NEDD1-211ENST00000557454 COPS6Q7L5N1 327 aa12.44□□□□□ -0.42
NEDD1-211ENST00000557454 CDX2Q99626 313 aaPredicted RBP12.44□□□□□ -0.42
NEDD1-211ENST00000557454 CPA4Q9UI42 421 aa12.44□□□□□ -0.42
NEDD1-211ENST00000557454 PCDHAC2Q9Y5I4 1007 aa12.44□□□□□ -0.42
NEDD1-211ENST00000557454 MED23Q9ULK4 1368 aa12.43□□□□□ -0.42
NEDD1-211ENST00000557454 ATP2B4P23634 1241 aa12.43□□□□□ -0.42
NEDD1-211ENST00000557454 MMP14P50281 582 aa12.43□□□□□ -0.42
NEDD1-211ENST00000557454 MKRN4PQ13434 485 aaPredicted RBP12.43□□□□□ -0.42
NEDD1-211ENST00000557454 DLGAP5Q15398 846 aa12.43□□□□□ -0.42
NEDD1-211ENST00000557454 CC2D1BQ5T0F9 858 aaKnown RBP12.43□□□□□ -0.42
NEDD1-211ENST00000557454 ZNF697Q5TEC3 545 aa12.43□□□□□ -0.42
NEDD1-211ENST00000557454 C17orf99Q6UX52 265 aa12.43□□□□□ -0.42
NEDD1-211ENST00000557454 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.43□□□□□ -0.42
NEDD1-211ENST00000557454 NECAB2Q7Z6G3 386 aa12.43□□□□□ -0.42
NEDD1-211ENST00000557454 SLAIN1Q8ND83 568 aa12.43□□□□□ -0.42
NEDD1-211ENST00000557454 VEZTQ9HBM0 779 aa12.43□□□□□ -0.42
NEDD1-211ENST00000557454 AOX1Q06278 1338 aa12.42□□□□□ -0.42
NEDD1-211ENST00000557454 COL2A1P02458 1487 aaPredicted RBP12.42□□□□□ -0.42
NEDD1-211ENST00000557454 IRS4O14654 1257 aaPredicted RBP12.42□□□□□ -0.42
NEDD1-211ENST00000557454 VGLL4Q14135 290 aa12.42□□□□□ -0.42
NEDD1-211ENST00000557454 TJAP1Q5JTD0 557 aa12.42□□□□□ -0.42
NEDD1-211ENST00000557454 ADGRA2Q96PE1 1338 aa12.41□□□□□ -0.42
NEDD1-211ENST00000557454 INHAP05111 366 aa12.41□□□□□ -0.42
NEDD1-211ENST00000557454 HELBQ8NG08 1087 aaPredicted RBP12.41□□□□□ -0.42
NEDD1-211ENST00000557454 CRISPLD2Q9H0B8 497 aa12.41□□□□□ -0.42
NEDD1-211ENST00000557454 ZCCHC17Q9NP64 241 aaKnown RBP12.41□□□□□ -0.42
NEDD1-211ENST00000557454 FAM205AQ6ZU69 1335 aa12.4□□□□□ -0.42
NEDD1-211ENST00000557454 ATP5J2-PTCD1G3V325 749 aa12.4□□□□□ -0.42
NEDD1-211ENST00000557454 CETPP11597 493 aa12.4□□□□□ -0.42
NEDD1-211ENST00000557454 ELNP15502 786 aa12.4□□□□□ -0.42
NEDD1-211ENST00000557454 RASA3Q14644 834 aa12.4□□□□□ -0.42
NEDD1-211ENST00000557454 TTLL5Q6EMB2 1281 aa12.4□□□□□ -0.42
NEDD1-211ENST00000557454 CDAN1Q8IWY9 1227 aa12.4□□□□□ -0.42
NEDD1-211ENST00000557454 MYLIPQ8WY64 445 aa12.4□□□□□ -0.42
NEDD1-211ENST00000557454 PAK6Q9NQU5 681 aaPredicted RBP12.4□□□□□ -0.42
NEDD1-211ENST00000557454 GABRQQ9UN88 632 aa12.4□□□□□ -0.42
NEDD1-211ENST00000557454 ADCY3O60266 1144 aa12.39□□□□□ -0.43
NEDD1-211ENST00000557454 TXNRD3Q86VQ6 643 aa12.39□□□□□ -0.43
NEDD1-211ENST00000557454 MTMR14Q8NCE2 650 aa12.39□□□□□ -0.43
NEDD1-211ENST00000557454 SNX27Q96L92 541 aa12.39□□□□□ -0.43
NEDD1-211ENST00000557454 CCDC85AQ96PX6 553 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms