RNA–Protein interactions for RNA: ENST00000557422.1

RTN1-208, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-208ENST00000557422 PTPN18Q99952 460 aa15.67■□□□□ 0.1
RTN1-208ENST00000557422 CD209Q9NNX6 404 aa15.67■□□□□ 0.1
RTN1-208ENST00000557422 CLRN2A0PK11 232 aa15.66■□□□□ 0.1
RTN1-208ENST00000557422 TESPA1A2RU30 521 aaPredicted RBP15.66■□□□□ 0.1
RTN1-208ENST00000557422 H7C1W4 665 aa15.66■□□□□ 0.1
RTN1-208ENST00000557422 ITGA6P23229 1130 aa15.66■□□□□ 0.1
RTN1-208ENST00000557422 NBPF12Q5TAG4 269 aaPredicted RBP15.66■□□□□ 0.1
RTN1-208ENST00000557422 UBE3BQ7Z3V4 1068 aa15.66■□□□□ 0.1
RTN1-208ENST00000557422 CHMP4AQ9BY43 222 aa15.66■□□□□ 0.1
RTN1-208ENST00000557422 CEP290O15078 2479 aa15.65■□□□□ 0.1
RTN1-208ENST00000557422 NEURL1BA8MQ27 555 aa15.65■□□□□ 0.1
RTN1-208ENST00000557422 USP2O75604 605 aaPredicted RBP15.65■□□□□ 0.1
RTN1-208ENST00000557422 KCNJ4P48050 445 aa15.65■□□□□ 0.1
RTN1-208ENST00000557422 IREB2P48200 963 aaKnown RBP15.65■□□□□ 0.1
RTN1-208ENST00000557422 CALD1Q05682 793 aaKnown RBP15.65■□□□□ 0.1
RTN1-208ENST00000557422 NEXNQ0ZGT2 675 aa15.65■□□□□ 0.1
RTN1-208ENST00000557422 PRMT6Q96LA8 375 aaPredicted RBP15.65■□□□□ 0.1
RTN1-208ENST00000557422 MPHOSPH8Q99549 860 aa15.65■□□□□ 0.1
RTN1-208ENST00000557422 TMEM106CQ9BVX2 250 aa15.65■□□□□ 0.1
RTN1-208ENST00000557422 COLQQ9Y215 455 aaPredicted RBP15.65■□□□□ 0.1
RTN1-208ENST00000557422 SPDYE2BA6NHP3 402 aa15.64■□□□□ 0.09
RTN1-208ENST00000557422 SNAP23O00161 211 aa15.64■□□□□ 0.09
RTN1-208ENST00000557422 MYO1BO43795 1136 aa15.64■□□□□ 0.09
RTN1-208ENST00000557422 SPDYE6P0CI01 402 aa15.64■□□□□ 0.09
RTN1-208ENST00000557422 CHRNDQ07001 517 aa15.64■□□□□ 0.09
RTN1-208ENST00000557422 CFAP100Q494V2 611 aa15.64■□□□□ 0.09
RTN1-208ENST00000557422 TSPYL6Q8N831 410 aa15.64■□□□□ 0.09
RTN1-208ENST00000557422 ZNF333Q96JL9 665 aa15.64■□□□□ 0.09
RTN1-208ENST00000557422 PLA2G12BQ9BX93 195 aa15.64■□□□□ 0.09
RTN1-208ENST00000557422 AOX1Q06278 1338 aa15.64■□□□□ 0.09
RTN1-208ENST00000557422 IRS2Q9Y4H2 1338 aa15.64■□□□□ 0.09
RTN1-208ENST00000557422 ECM29Q5VYK3 1845 aa15.64■□□□□ 0.09
RTN1-208ENST00000557422 F8W031 263 aaPredicted RBP15.63■□□□□ 0.09
RTN1-208ENST00000557422 APAF1O14727 1248 aa15.63■□□□□ 0.09
RTN1-208ENST00000557422 CSF1RP07333 972 aa15.63■□□□□ 0.09
RTN1-208ENST00000557422 C15orf52Q6ZUT6 534 aaKnown RBP15.63■□□□□ 0.09
RTN1-208ENST00000557422 ANKRD13AQ8IZ07 590 aa15.63■□□□□ 0.09
RTN1-208ENST00000557422 VEZTQ9HBM0 779 aa15.63■□□□□ 0.09
RTN1-208ENST00000557422 TRIOBPQ9H2D6 2365 aa15.62■□□□□ 0.09
RTN1-208ENST00000557422 BRCA2P51587 3418 aa15.62■□□□□ 0.09
RTN1-208ENST00000557422 RASA3Q14644 834 aa15.62■□□□□ 0.09
RTN1-208ENST00000557422 MS4A4AQ96JQ5 239 aa15.62■□□□□ 0.09
RTN1-208ENST00000557422 TAF5LO75529 589 aa15.61■□□□□ 0.09
RTN1-208ENST00000557422 IL1R1P14778 569 aa15.61■□□□□ 0.09
RTN1-208ENST00000557422 ZEB1P37275 1124 aaPredicted RBP15.61■□□□□ 0.09
RTN1-208ENST00000557422 CASP7P55210 303 aa15.61■□□□□ 0.09
RTN1-208ENST00000557422 FKBP1AP62942 108 aaKnown RBP15.61■□□□□ 0.09
RTN1-208ENST00000557422 GCKRQ14397 625 aa15.61■□□□□ 0.09
RTN1-208ENST00000557422 SLC9C1Q4G0N8 1177 aa15.61■□□□□ 0.09
RTN1-208ENST00000557422 G2E3Q7L622 706 aa15.61■□□□□ 0.09
RTN1-208ENST00000557422 NBPF11Q86T75 865 aa15.61■□□□□ 0.09
RTN1-208ENST00000557422 HELBQ8NG08 1087 aaPredicted RBP15.61■□□□□ 0.09
RTN1-208ENST00000557422 OPTNQ96CV9 577 aa15.61■□□□□ 0.09
RTN1-208ENST00000557422 ELP3Q9H9T3 547 aa15.61■□□□□ 0.09
RTN1-208ENST00000557422 PTCH2Q9Y6C5 1203 aa15.61■□□□□ 0.09
RTN1-208ENST00000557422 ARHGEF6Q15052 776 aa15.6■□□□□ 0.09
RTN1-208ENST00000557422 BRI3BPQ8WY22 251 aa15.6■□□□□ 0.09
RTN1-208ENST00000557422 STK31Q9BXU1 1019 aa15.6■□□□□ 0.09
RTN1-208ENST00000557422 H0YGN5 161 aa15.59■□□□□ 0.09
RTN1-208ENST00000557422 RBM5P52756 815 aaKnown RBP eCLIP15.59■□□□□ 0.09
RTN1-208ENST00000557422 SLC4A8Q2Y0W8 1093 aa15.59■□□□□ 0.09
RTN1-208ENST00000557422 ZNF804AQ7Z570 1209 aa15.59■□□□□ 0.09
RTN1-208ENST00000557422 CNKSR2Q8WXI2 1034 aa15.59■□□□□ 0.09
RTN1-208ENST00000557422 ZFYVE28Q9HCC9 887 aa15.59■□□□□ 0.09
RTN1-208ENST00000557422 ANKRD18BA2A2Z9 1011 aa15.58■□□□□ 0.08
RTN1-208ENST00000557422 TAF1CQ15572 869 aaPredicted RBP15.58■□□□□ 0.08
RTN1-208ENST00000557422 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.58■□□□□ 0.08
RTN1-208ENST00000557422 OTUD5Q96G74 571 aa15.58■□□□□ 0.08
RTN1-208ENST00000557422 JAG2Q9Y219 1238 aa15.58■□□□□ 0.08
RTN1-208ENST00000557422 OTOFQ9HC10 1997 aa15.58■□□□□ 0.08
RTN1-208ENST00000557422 CCL15-CCL14A0A0B4J2E2 113 aa15.57■□□□□ 0.08
RTN1-208ENST00000557422 MYCP01106 439 aaPredicted RBP15.57■□□□□ 0.08
RTN1-208ENST00000557422 SLC4A2P04920 1241 aa15.57■□□□□ 0.08
RTN1-208ENST00000557422 DDX10Q13206 875 aaKnown RBP15.57■□□□□ 0.08
RTN1-208ENST00000557422 TNFAIP1Q13829 316 aa15.57■□□□□ 0.08
RTN1-208ENST00000557422 CCL15Q16663 113 aa15.57■□□□□ 0.08
RTN1-208ENST00000557422 SPDYE2Q495Y8 402 aa15.57■□□□□ 0.08
RTN1-208ENST00000557422 CDAN1Q8IWY9 1227 aa15.57■□□□□ 0.08
RTN1-208ENST00000557422 TEPSINQ96N21 525 aa15.57■□□□□ 0.08
RTN1-208ENST00000557422 MYH16Q9H6N6 1097 aa15.57■□□□□ 0.08
RTN1-208ENST00000557422 ZNF70Q9UC06 446 aaPredicted RBP15.57■□□□□ 0.08
RTN1-208ENST00000557422 GTF2A2P52657 109 aa15.56■□□□□ 0.08
RTN1-208ENST00000557422 VGLL4Q14135 290 aa15.56■□□□□ 0.08
RTN1-208ENST00000557422 FAM43AQ8N2R8 423 aa15.56■□□□□ 0.08
RTN1-208ENST00000557422 TSR2Q969E8 191 aaKnown RBP15.56■□□□□ 0.08
RTN1-208ENST00000557422 TDRD3Q9H7E2 651 aaKnown RBP15.56■□□□□ 0.08
RTN1-208ENST00000557422 FAM205AQ6ZU69 1335 aa15.55■□□□□ 0.08
RTN1-208ENST00000557422 MAP3K9P80192 1104 aa15.55■□□□□ 0.08
RTN1-208ENST00000557422 FOXO4P98177 505 aa15.55■□□□□ 0.08
RTN1-208ENST00000557422 IFIT5Q13325 482 aaKnown RBP15.55■□□□□ 0.08
RTN1-208ENST00000557422 LINS1Q8NG48 757 aa15.55■□□□□ 0.08
RTN1-208ENST00000557422 SH3TC2Q8TF17 1288 aa15.55■□□□□ 0.08
RTN1-208ENST00000557422 A0A1B0GUL6 1792 aa15.54■□□□□ 0.08
RTN1-208ENST00000557422 TWISTNBQ3B726 338 aaPredicted RBP15.54■□□□□ 0.08
RTN1-208ENST00000557422 DZIP1LQ8IYY4 767 aaKnown RBP15.54■□□□□ 0.08
RTN1-208ENST00000557422 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.54■□□□□ 0.08
RTN1-208ENST00000557422 DNAAF4Q8WXU2 420 aa15.54■□□□□ 0.08
RTN1-208ENST00000557422 ARHGAP39Q9C0H5 1083 aa15.54■□□□□ 0.08
RTN1-208ENST00000557422 TMEM39BQ9GZU3 492 aa15.54■□□□□ 0.08
RTN1-208ENST00000557422 SERPINA10Q9UK55 444 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms