RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 TDRD7Q8NHU6 1098 aaKnown RBP17.12■□□□□ 0.33
VPS33B-206ENST00000557358 ZNF408Q9H9D4 720 aa17.12■□□□□ 0.33
VPS33B-206ENST00000557358 GGA3Q9NZ52 723 aa17.12■□□□□ 0.33
VPS33B-206ENST00000557358 TNNQ9UQP3 1299 aa17.12■□□□□ 0.33
VPS33B-206ENST00000557358 IRS2Q9Y4H2 1338 aa17.12■□□□□ 0.33
VPS33B-206ENST00000557358 MFSD14BQ5SR56 506 aa17.11■□□□□ 0.33
VPS33B-206ENST00000557358 PAXIP1Q6ZW49 1069 aaPredicted RBP17.11■□□□□ 0.33
VPS33B-206ENST00000557358 FBXO33Q7Z6M2 555 aa17.11■□□□□ 0.33
VPS33B-206ENST00000557358 VGLL2Q8N8G2 317 aa17.11■□□□□ 0.33
VPS33B-206ENST00000557358 MXD3Q9BW11 206 aa17.11■□□□□ 0.33
VPS33B-206ENST00000557358 MKRN1Q9UHC7 482 aaKnown RBP17.11■□□□□ 0.33
VPS33B-206ENST00000557358 FAM205AQ6ZU69 1335 aa17.11■□□□□ 0.33
VPS33B-206ENST00000557358 PITPNM2Q9BZ72 1349 aa17.11■□□□□ 0.33
VPS33B-206ENST00000557358 POLR2AP24928 1970 aaKnown RBP17.11■□□□□ 0.33
VPS33B-206ENST00000557358 TRAF5O00463 557 aa17.1■□□□□ 0.33
VPS33B-206ENST00000557358 RBM5P52756 815 aaKnown RBP eCLIP17.1■□□□□ 0.33
VPS33B-206ENST00000557358 CHAF1AQ13111 956 aaPredicted RBP17.1■□□□□ 0.33
VPS33B-206ENST00000557358 OS9Q13438 667 aaPredicted RBP17.1■□□□□ 0.33
VPS33B-206ENST00000557358 DEFB115Q30KQ5 88 aa17.1■□□□□ 0.33
VPS33B-206ENST00000557358 ANGEL2Q5VTE6 544 aaKnown RBP17.1■□□□□ 0.33
VPS33B-206ENST00000557358 ATG9AQ7Z3C6 839 aa17.1■□□□□ 0.33
VPS33B-206ENST00000557358 PA2G4Q9UQ80 394 aaKnown RBP17.1■□□□□ 0.33
VPS33B-206ENST00000557358 F8W031 263 aaPredicted RBP17.09■□□□□ 0.33
VPS33B-206ENST00000557358 EGFRP00533 1210 aa17.09■□□□□ 0.33
VPS33B-206ENST00000557358 ECE1P42892 770 aa17.09■□□□□ 0.33
VPS33B-206ENST00000557358 DDX19BQ9UMR2 479 aa17.09■□□□□ 0.33
VPS33B-206ENST00000557358 CNTNAP1P78357 1384 aa17.08■□□□□ 0.32
VPS33B-206ENST00000557358 MAST3O60307 1309 aa17.08■□□□□ 0.32
VPS33B-206ENST00000557358 FGFR2P21802 821 aa17.08■□□□□ 0.32
VPS33B-206ENST00000557358 NF2P35240 595 aa17.08■□□□□ 0.32
VPS33B-206ENST00000557358 BCAMP50895 628 aa17.08■□□□□ 0.32
VPS33B-206ENST00000557358 APOBEC3FQ8IUX4 373 aaKnown RBP17.08■□□□□ 0.32
VPS33B-206ENST00000557358 C2orf69Q8N8R5 385 aa17.08■□□□□ 0.32
VPS33B-206ENST00000557358 PANK1Q8TE04 598 aa17.08■□□□□ 0.32
VPS33B-206ENST00000557358 JAG2Q9Y219 1238 aa17.08■□□□□ 0.32
VPS33B-206ENST00000557358 WNT10BO00744 389 aa17.07■□□□□ 0.32
VPS33B-206ENST00000557358 ZBTB7BO15156 539 aaPredicted RBP17.07■□□□□ 0.32
VPS33B-206ENST00000557358 RLBP1P12271 317 aa17.07■□□□□ 0.32
VPS33B-206ENST00000557358 ATP8B2P98198 1209 aa17.07■□□□□ 0.32
VPS33B-206ENST00000557358 GORABQ5T7V8 394 aa17.07■□□□□ 0.32
VPS33B-206ENST00000557358 WDR66Q8TBY9 1149 aa17.07■□□□□ 0.32
VPS33B-206ENST00000557358 TTF2Q9UNY4 1162 aaKnown RBP17.07■□□□□ 0.32
VPS33B-206ENST00000557358 IQSEC3Q9UPP2 1182 aaPredicted RBP17.07■□□□□ 0.32
VPS33B-206ENST00000557358 RASSF10A6NK89 507 aa17.06■□□□□ 0.32
VPS33B-206ENST00000557358 SEMA3EO15041 775 aa17.06■□□□□ 0.32
VPS33B-206ENST00000557358 MVPQ14764 893 aaKnown RBP17.06■□□□□ 0.32
VPS33B-206ENST00000557358 NBPF9Q3BBW0 867 aa17.06■□□□□ 0.32
VPS33B-206ENST00000557358 CFAP100Q494V2 611 aa17.06■□□□□ 0.32
VPS33B-206ENST00000557358 JMYQ8N9B5 988 aa17.06■□□□□ 0.32
VPS33B-206ENST00000557358 DENND2AQ9ULE3 1009 aa17.06■□□□□ 0.32
VPS33B-206ENST00000557358 SUGT1Q9Y2Z0 365 aa17.06■□□□□ 0.32
VPS33B-206ENST00000557358 ADM5C9JUS6 153 aa17.05■□□□□ 0.32
VPS33B-206ENST00000557358 CST9Q5W186 159 aa17.05■□□□□ 0.32
VPS33B-206ENST00000557358 ZGPATQ8N5A5 531 aaKnown RBP17.05■□□□□ 0.32
VPS33B-206ENST00000557358 CERS5Q8N5B7 392 aa17.05■□□□□ 0.32
VPS33B-206ENST00000557358 MTMR14Q8NCE2 650 aa17.05■□□□□ 0.32
VPS33B-206ENST00000557358 NEUROD6Q96NK8 337 aa17.05■□□□□ 0.32
VPS33B-206ENST00000557358 GBA2Q9HCG7 927 aaPredicted RBP17.05■□□□□ 0.32
VPS33B-206ENST00000557358 SERPINA10Q9UK55 444 aa17.05■□□□□ 0.32
VPS33B-206ENST00000557358 TLL2Q9Y6L7 1015 aa17.05■□□□□ 0.32
VPS33B-206ENST00000557358 MYH13Q9UKX3 1938 aa17.05■□□□□ 0.32
VPS33B-206ENST00000557358 PNMA6EA0A0J9YXQ4 647 aa17.04■□□□□ 0.32
VPS33B-206ENST00000557358 HMMRO75330 724 aa17.04■□□□□ 0.32
VPS33B-206ENST00000557358 SURF6O75683 361 aaKnown RBP17.04■□□□□ 0.32
VPS33B-206ENST00000557358 FMR1Q06787 632 aaKnown RBP eCLIP17.04■□□□□ 0.32
VPS33B-206ENST00000557358 TFCP2Q12800 502 aa17.04■□□□□ 0.32
VPS33B-206ENST00000557358 TNFAIP1Q13829 316 aa17.04■□□□□ 0.32
VPS33B-206ENST00000557358 PDE3AQ14432 1141 aa17.04■□□□□ 0.32
VPS33B-206ENST00000557358 CDCA5Q96FF9 252 aa17.04■□□□□ 0.32
VPS33B-206ENST00000557358 C1orf115Q9H7X2 142 aa17.04■□□□□ 0.32
VPS33B-206ENST00000557358 A0A1B0GUL7 405 aa17.03■□□□□ 0.32
VPS33B-206ENST00000557358 HUNKP57058 714 aa17.03■□□□□ 0.32
VPS33B-206ENST00000557358 FKBP1BP68106 108 aa17.03■□□□□ 0.32
VPS33B-206ENST00000557358 HDLBPQ00341 1268 aaKnown RBP17.03■□□□□ 0.32
VPS33B-206ENST00000557358 GRM1Q13255 1194 aa17.03■□□□□ 0.32
VPS33B-206ENST00000557358 HSP90AB4PQ58FF6 505 aa17.03■□□□□ 0.32
VPS33B-206ENST00000557358 SSH3Q8TE77 659 aa17.03■□□□□ 0.32
VPS33B-206ENST00000557358 TEKT1Q969V4 418 aa17.03■□□□□ 0.32
VPS33B-206ENST00000557358 AIDAQ96BJ3 306 aa17.03■□□□□ 0.32
VPS33B-206ENST00000557358 HHIPL1Q96JK4 782 aa17.03■□□□□ 0.32
VPS33B-206ENST00000557358 TMOD2Q9NZR1 351 aa17.03■□□□□ 0.32
VPS33B-206ENST00000557358 ZNF646O15015 1829 aaPredicted RBP17.03■□□□□ 0.32
VPS33B-206ENST00000557358 ASTN2O75129 1339 aaPredicted RBP17.02■□□□□ 0.32
VPS33B-206ENST00000557358 SPDYE2BA6NHP3 402 aa17.02■□□□□ 0.32
VPS33B-206ENST00000557358 SPDYE6P0CI01 402 aa17.02■□□□□ 0.32
VPS33B-206ENST00000557358 VEGFBP49765 207 aa17.02■□□□□ 0.32
VPS33B-206ENST00000557358 TTLL12Q14166 644 aaPredicted RBP17.02■□□□□ 0.32
VPS33B-206ENST00000557358 POLA2Q14181 598 aa17.02■□□□□ 0.32
VPS33B-206ENST00000557358 SAPCD2Q86UD0 394 aa17.02■□□□□ 0.32
VPS33B-206ENST00000557358 ERC1Q8IUD2 1116 aa17.02■□□□□ 0.32
VPS33B-206ENST00000557358 CAPNS2Q96L46 248 aa17.02■□□□□ 0.32
VPS33B-206ENST00000557358 BEGAINQ9BUH8 593 aa17.02■□□□□ 0.32
VPS33B-206ENST00000557358 VEZTQ9HBM0 779 aa17.02■□□□□ 0.32
VPS33B-206ENST00000557358 COG6Q9Y2V7 657 aa17.02■□□□□ 0.32
VPS33B-206ENST00000557358 PPP2R3BQ9Y5P8 575 aa17.02■□□□□ 0.32
VPS33B-206ENST00000557358 WDR33Q9C0J8 1336 aaKnown RBP17.01■□□□□ 0.31
VPS33B-206ENST00000557358 CRKP46108 304 aa17.01■□□□□ 0.31
VPS33B-206ENST00000557358 TIMM10P62072 90 aa17.01■□□□□ 0.31
VPS33B-206ENST00000557358 CCDC102BQ68D86 513 aa17.01■□□□□ 0.31
VPS33B-206ENST00000557358 RPAP2Q8IXW5 612 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms