RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 FOXD4L5Q5VV16 416 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-247ENST00000557311 AMIGO3Q86WK7 504 aa6.79□□□□□ -1.32
ATXN3-247ENST00000557311 NLGN1Q8N2Q7 840 aa6.79□□□□□ -1.32
ATXN3-247ENST00000557311 CCDC155Q8N6L0 562 aa6.79□□□□□ -1.32
ATXN3-247ENST00000557311 KDF1Q8NAX2 398 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-247ENST00000557311 ADAMTS19Q8TE59 1207 aa6.79□□□□□ -1.32
ATXN3-247ENST00000557311 WHAMMQ8TF30 809 aa6.79□□□□□ -1.32
ATXN3-247ENST00000557311 NANOS1Q8WY41 292 aaKnown RBP6.79□□□□□ -1.32
ATXN3-247ENST00000557311 SERTAD1Q9UHV2 236 aa6.79□□□□□ -1.32
ATXN3-247ENST00000557311 RBM19Q9Y4C8 960 aaKnown RBP6.79□□□□□ -1.32
ATXN3-247ENST00000557311 GOLGB1Q14789 3259 aaKnown RBP6.79□□□□□ -1.32
ATXN3-247ENST00000557311 ROCK2O75116 1388 aaKnown RBP6.79□□□□□ -1.32
ATXN3-247ENST00000557311 COL24A1Q17RW2 1714 aa6.79□□□□□ -1.32
ATXN3-247ENST00000557311 KIAA1210Q9ULL0 1709 aa6.79□□□□□ -1.32
ATXN3-247ENST00000557311 BTAF1O14981 1849 aa6.78□□□□□ -1.32
ATXN3-247ENST00000557311 EDC4Q6P2E9 1401 aaKnown RBP6.78□□□□□ -1.32
ATXN3-247ENST00000557311 NSD3Q9BZ95 1437 aa6.78□□□□□ -1.32
ATXN3-247ENST00000557311 LOC102724428A0A0B4J2F2 783 aa6.78□□□□□ -1.32
ATXN3-247ENST00000557311 CDC14CA4D256 554 aa6.78□□□□□ -1.32
ATXN3-247ENST00000557311 SLC35F4A4IF30 521 aa6.78□□□□□ -1.32
ATXN3-247ENST00000557311 STAU1O95793 577 aaKnown RBP6.78□□□□□ -1.32
ATXN3-247ENST00000557311 MMP10P09238 476 aa6.78□□□□□ -1.32
ATXN3-247ENST00000557311 FBLN1P23142 703 aa6.78□□□□□ -1.32
ATXN3-247ENST00000557311 SIK1P57059 783 aa6.78□□□□□ -1.32
ATXN3-247ENST00000557311 POU4F2Q12837 409 aa6.78□□□□□ -1.32
ATXN3-247ENST00000557311 CLN3Q13286 438 aa6.78□□□□□ -1.32
ATXN3-247ENST00000557311 GNASQ5JWF2 1037 aa6.78□□□□□ -1.32
ATXN3-247ENST00000557311 C9orf131Q5VYM1 1079 aa6.78□□□□□ -1.32
ATXN3-247ENST00000557311 ZNF385CQ66K41 422 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-247ENST00000557311 RIPOR1Q6ZS17 1223 aa6.78□□□□□ -1.32
ATXN3-247ENST00000557311 TBC1D9Q6ZT07 1266 aa6.78□□□□□ -1.32
ATXN3-247ENST00000557311 SMIM5Q71RC9 77 aa6.78□□□□□ -1.32
ATXN3-247ENST00000557311 PIGBQ92521 554 aa6.78□□□□□ -1.32
ATXN3-247ENST00000557311 ZSCAN10Q96SZ4 725 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-247ENST00000557311 KDM2BQ8NHM5 1336 aa6.77□□□□□ -1.32
ATXN3-247ENST00000557311 PCDH11XQ9BZA7 1347 aa6.77□□□□□ -1.32
ATXN3-247ENST00000557311 PCDH11YQ9BZA8 1340 aa6.77□□□□□ -1.32
ATXN3-247ENST00000557311 USP17L3A6NCW0 530 aa6.77□□□□□ -1.33
ATXN3-247ENST00000557311 USP17L4A6NCW7 530 aa6.77□□□□□ -1.33
ATXN3-247ENST00000557311 CYP27B1O15528 508 aa6.77□□□□□ -1.33
ATXN3-247ENST00000557311 ATP9BO43861 1147 aa6.77□□□□□ -1.33
ATXN3-247ENST00000557311 DPEP1P16444 411 aa6.77□□□□□ -1.33
ATXN3-247ENST00000557311 PHKA2P46019 1235 aa6.77□□□□□ -1.33
ATXN3-247ENST00000557311 RNF144AP50876 292 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-247ENST00000557311 GDF10P55107 478 aa6.77□□□□□ -1.33
ATXN3-247ENST00000557311 GTF2IP78347 998 aa6.77□□□□□ -1.33
ATXN3-247ENST00000557311 TMF1P82094 1093 aa6.77□□□□□ -1.33
ATXN3-247ENST00000557311 RASSF7Q02833 373 aa6.77□□□□□ -1.33
ATXN3-247ENST00000557311 CENPCQ03188 943 aa6.77□□□□□ -1.33
ATXN3-247ENST00000557311 TLR1Q15399 786 aa6.77□□□□□ -1.33
ATXN3-247ENST00000557311 TRAPPC3LQ5T215 181 aa6.77□□□□□ -1.33
ATXN3-247ENST00000557311 USP17L2Q6R6M4 530 aa6.77□□□□□ -1.33
ATXN3-247ENST00000557311 USP17L1Q7RTZ2 530 aa6.77□□□□□ -1.33
ATXN3-247ENST00000557311 TRIM50Q86XT4 487 aa6.77□□□□□ -1.33
ATXN3-247ENST00000557311 VWA5B2Q8N398 1253 aa6.77□□□□□ -1.33
ATXN3-247ENST00000557311 USHBP1Q8N6Y0 703 aa6.77□□□□□ -1.33
ATXN3-247ENST00000557311 NFATC2IPQ8NCF5 419 aa6.77□□□□□ -1.33
ATXN3-247ENST00000557311 LINC00116Q8NCU8 138 aa6.77□□□□□ -1.33
ATXN3-247ENST00000557311 SMC1BQ8NDV3 1235 aa6.77□□□□□ -1.33
ATXN3-247ENST00000557311 GAS2L1Q99501 681 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-247ENST00000557311 ESYT1Q9BSJ8 1104 aa6.77□□□□□ -1.33
ATXN3-247ENST00000557311 RRAGCQ9HB90 399 aa6.77□□□□□ -1.33
ATXN3-247ENST00000557311 CCDC87Q9NVE4 849 aa6.77□□□□□ -1.33
ATXN3-247ENST00000557311 TFIP11Q9UBB9 837 aaKnown RBP6.77□□□□□ -1.33
ATXN3-247ENST00000557311 QSER1Q2KHR3 1735 aa6.76□□□□□ -1.33
ATXN3-247ENST00000557311 WNK3Q9BYP7 1800 aa6.76□□□□□ -1.33
ATXN3-247ENST00000557311 LZTS3O60299 673 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-247ENST00000557311 IL2RAP01589 272 aa6.76□□□□□ -1.33
ATXN3-247ENST00000557311 GPC1P35052 558 aa6.76□□□□□ -1.33
ATXN3-247ENST00000557311 CARD11Q9BXL7 1154 aa6.76□□□□□ -1.33
ATXN3-247ENST00000557311 ZMYND15Q9H091 742 aa6.76□□□□□ -1.33
ATXN3-247ENST00000557311 ETNK1Q9HBU6 452 aa6.76□□□□□ -1.33
ATXN3-247ENST00000557311 PIM2Q9P1W9 311 aa6.76□□□□□ -1.33
ATXN3-247ENST00000557311 CD163L1Q9NR16 1453 aa6.76□□□□□ -1.33
ATXN3-247ENST00000557311 QRICH2Q9H0J4 1663 aa6.76□□□□□ -1.33
ATXN3-247ENST00000557311 MEGF6O75095 1541 aa6.76□□□□□ -1.33
ATXN3-247ENST00000557311 A0A1W2PP64 1363 aa6.75□□□□□ -1.33
ATXN3-247ENST00000557311 GDF11O95390 407 aa6.75□□□□□ -1.33
ATXN3-247ENST00000557311 KCNA3P22001 575 aa6.75□□□□□ -1.33
ATXN3-247ENST00000557311 ITPK1Q13572 414 aa6.75□□□□□ -1.33
ATXN3-247ENST00000557311 RRS1Q15050 365 aaKnown RBP6.75□□□□□ -1.33
ATXN3-247ENST00000557311 HSP90AB2PQ58FF8 381 aa6.75□□□□□ -1.33
ATXN3-247ENST00000557311 DALRD3Q5D0E6 543 aaKnown RBP6.75□□□□□ -1.33
ATXN3-247ENST00000557311 TMEM151AQ8N4L1 468 aa6.75□□□□□ -1.33
ATXN3-247ENST00000557311 SIN3AQ96ST3 1273 aa6.75□□□□□ -1.33
ATXN3-247ENST00000557311 TMOD3Q9NYL9 352 aa6.75□□□□□ -1.33
ATXN3-247ENST00000557311 SPG7Q9UQ90 795 aa6.75□□□□□ -1.33
ATXN3-247ENST00000557311 RTCBQ9Y3I0 505 aaKnown RBP6.75□□□□□ -1.33
ATXN3-247ENST00000557311 PARP3Q9Y6F1 533 aa6.75□□□□□ -1.33
ATXN3-247ENST00000557311 RGPD5Q99666 1765 aa6.74□□□□□ -1.33
ATXN3-247ENST00000557311 PLEKHG2Q9H7P9 1386 aa6.74□□□□□ -1.33
ATXN3-247ENST00000557311 FYB1O15117 783 aa6.74□□□□□ -1.33
ATXN3-247ENST00000557311 ARHGEF15O94989 841 aa6.74□□□□□ -1.33
ATXN3-247ENST00000557311 HSPA1AP0DMV8 641 aaKnown RBP6.74□□□□□ -1.33
ATXN3-247ENST00000557311 HSPA1BP0DMV9 641 aaKnown RBP6.74□□□□□ -1.33
ATXN3-247ENST00000557311 ITGA6P23229 1130 aa6.74□□□□□ -1.33
ATXN3-247ENST00000557311 RFC4P35249 363 aa6.74□□□□□ -1.33
ATXN3-247ENST00000557311 ATP1A2P50993 1020 aa6.74□□□□□ -1.33
ATXN3-247ENST00000557311 NEUROD1Q13562 356 aa6.74□□□□□ -1.33
ATXN3-247ENST00000557311 TAS1R3Q7RTX0 852 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms