RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 NLRP3Q96P20 1036 aa12.69□□□□□ -0.38
HNRNPC-228ENST00000557033 UTP14AQ9BVJ6 771 aaKnown RBP12.69□□□□□ -0.38
HNRNPC-228ENST00000557033 HYPKQ9NX55 129 aa12.69□□□□□ -0.38
HNRNPC-228ENST00000557033 VEGFAP15692 232 aaPredicted RBP12.68□□□□□ -0.38
HNRNPC-228ENST00000557033 DOK7Q18PE1 504 aa12.68□□□□□ -0.38
HNRNPC-228ENST00000557033 GRIPAP1Q4V328 841 aa12.68□□□□□ -0.38
HNRNPC-228ENST00000557033 CCDC184Q52MB2 194 aa12.68□□□□□ -0.38
HNRNPC-228ENST00000557033 RPGRQ92834 1020 aaKnown RBP12.68□□□□□ -0.38
HNRNPC-228ENST00000557033 CRAMP1Q96RY5 1269 aa12.68□□□□□ -0.38
HNRNPC-228ENST00000557033 ZSWIM6Q9HCJ5 1215 aa12.68□□□□□ -0.38
HNRNPC-228ENST00000557033 CHPF2Q9P2E5 772 aa12.68□□□□□ -0.38
HNRNPC-228ENST00000557033 DICER1Q9UPY3 1922 aaKnown RBP12.68□□□□□ -0.38
HNRNPC-228ENST00000557033 CACNA1SQ13698 1873 aa12.68□□□□□ -0.38
HNRNPC-228ENST00000557033 C6orf229H3BNL8 230 aa12.67□□□□□ -0.38
HNRNPC-228ENST00000557033 HOXB3P14651 431 aaPredicted RBP12.67□□□□□ -0.38
HNRNPC-228ENST00000557033 FKBP4Q02790 459 aaKnown RBP eCLIP12.67□□□□□ -0.38
HNRNPC-228ENST00000557033 FSTL1Q12841 308 aa12.67□□□□□ -0.38
HNRNPC-228ENST00000557033 ANKRD13DQ6ZTN6 518 aa12.67□□□□□ -0.38
HNRNPC-228ENST00000557033 PLBD2Q8NHP8 589 aa12.67□□□□□ -0.38
HNRNPC-228ENST00000557033 RBM17Q96I25 401 aaKnown RBP12.67□□□□□ -0.38
HNRNPC-228ENST00000557033 ABCC12Q96J65 1359 aa12.67□□□□□ -0.38
HNRNPC-228ENST00000557033 TNRC6CQ9HCJ0 1690 aaKnown RBP12.67□□□□□ -0.38
HNRNPC-228ENST00000557033 TMEM164Q5U3C3 297 aa12.66□□□□□ -0.38
HNRNPC-228ENST00000557033 PHLDB3Q6NSJ2 640 aa12.66□□□□□ -0.38
HNRNPC-228ENST00000557033 NLRP10Q86W26 655 aa12.66□□□□□ -0.38
HNRNPC-228ENST00000557033 ZMIZ1Q9ULJ6 1067 aa12.66□□□□□ -0.38
HNRNPC-228ENST00000557033 APLP1P51693 650 aa12.65□□□□□ -0.38
HNRNPC-228ENST00000557033 PSMD1Q99460 953 aa12.65□□□□□ -0.38
HNRNPC-228ENST00000557033 MRS2Q9HD23 443 aa12.65□□□□□ -0.38
HNRNPC-228ENST00000557033 IGSF5Q9NSI5 407 aa12.65□□□□□ -0.38
HNRNPC-228ENST00000557033 TIAM2Q8IVF5 1701 aa12.65□□□□□ -0.38
HNRNPC-228ENST00000557033 TRIM28Q13263 835 aaKnown RBP12.64□□□□□ -0.39
HNRNPC-228ENST00000557033 SYNE4Q8N205 404 aa12.64□□□□□ -0.39
HNRNPC-228ENST00000557033 SMC1BQ8NDV3 1235 aa12.64□□□□□ -0.39
HNRNPC-228ENST00000557033 TMX4Q9H1E5 349 aaPredicted RBP12.64□□□□□ -0.39
HNRNPC-228ENST00000557033 TRMT112Q9UI30 125 aaKnown RBP12.64□□□□□ -0.39
HNRNPC-228ENST00000557033 ANKRD36CQ5JPF3 1778 aa12.64□□□□□ -0.39
HNRNPC-228ENST00000557033 SH3TC1Q8TE82 1336 aa12.63□□□□□ -0.39
HNRNPC-228ENST00000557033 POTECB2RU33 542 aa12.63□□□□□ -0.39
HNRNPC-228ENST00000557033 ELL2O00472 640 aaPredicted RBP12.63□□□□□ -0.39
HNRNPC-228ENST00000557033 BBOX1O75936 387 aa12.63□□□□□ -0.39
HNRNPC-228ENST00000557033 PROX2Q3B8N5 592 aa12.63□□□□□ -0.39
HNRNPC-228ENST00000557033 CCDC30Q5VVM6 783 aa12.63□□□□□ -0.39
HNRNPC-228ENST00000557033 C8orf58Q8NAV2 365 aa12.63□□□□□ -0.39
HNRNPC-228ENST00000557033 STK32AQ8WU08 396 aa12.63□□□□□ -0.39
HNRNPC-228ENST00000557033 ISCA1Q9BUE6 129 aa12.63□□□□□ -0.39
HNRNPC-228ENST00000557033 ZNF277Q9NRM2 450 aaPredicted RBP12.63□□□□□ -0.39
HNRNPC-228ENST00000557033 WDR90Q96KV7 1748 aa12.62□□□□□ -0.39
HNRNPC-228ENST00000557033 PPEF1O14829 653 aaPredicted RBP12.62□□□□□ -0.39
HNRNPC-228ENST00000557033 RIMBP2O15034 1052 aa12.62□□□□□ -0.39
HNRNPC-228ENST00000557033 DDNO94850 711 aaPredicted RBP12.62□□□□□ -0.39
HNRNPC-228ENST00000557033 IARSP41252 1262 aaKnown RBP12.62□□□□□ -0.39
HNRNPC-228ENST00000557033 SWT1Q5T5J6 900 aaKnown RBP12.62□□□□□ -0.39
HNRNPC-228ENST00000557033 OLFM4Q6UX06 510 aa12.62□□□□□ -0.39
HNRNPC-228ENST00000557033 VPS33BQ9H267 617 aa12.62□□□□□ -0.39
HNRNPC-228ENST00000557033 IL16Q14005 1332 aa12.62□□□□□ -0.39
HNRNPC-228ENST00000557033 ERCC3P19447 782 aa12.61□□□□□ -0.39
HNRNPC-228ENST00000557033 NR1H3Q13133 447 aa12.61□□□□□ -0.39
HNRNPC-228ENST00000557033 JDP2Q8WYK2 163 aa12.61□□□□□ -0.39
HNRNPC-228ENST00000557033 SYMPKQ92797 1274 aaKnown RBP12.61□□□□□ -0.39
HNRNPC-228ENST00000557033 ATP6V0A2Q9Y487 856 aa12.61□□□□□ -0.39
HNRNPC-228ENST00000557033 SNED1Q8TER0 1413 aa12.61□□□□□ -0.39
HNRNPC-228ENST00000557033 IQCA1LA6NCM1 817 aa12.6□□□□□ -0.39
HNRNPC-228ENST00000557033 FZD9O00144 591 aa12.6□□□□□ -0.39
HNRNPC-228ENST00000557033 DDX58O95786 925 aaKnown RBP12.6□□□□□ -0.39
HNRNPC-228ENST00000557033 HCLS1P14317 486 aaPredicted RBP12.6□□□□□ -0.39
HNRNPC-228ENST00000557033 ARID4AP29374 1257 aaPredicted RBP12.6□□□□□ -0.39
HNRNPC-228ENST00000557033 DNAJC14Q6Y2X3 702 aaPredicted RBP12.6□□□□□ -0.39
HNRNPC-228ENST00000557033 DDX46Q7L014 1031 aaKnown RBP12.6□□□□□ -0.39
HNRNPC-228ENST00000557033 WDR63Q8IWG1 891 aa12.6□□□□□ -0.39
HNRNPC-228ENST00000557033 SP8Q8IXZ3 490 aa12.6□□□□□ -0.39
HNRNPC-228ENST00000557033 PHAXQ9H814 394 aaKnown RBP12.6□□□□□ -0.39
HNRNPC-228ENST00000557033 NOVA2Q9UNW9 492 aaKnown RBP12.6□□□□□ -0.39
HNRNPC-228ENST00000557033 ABCC4O15439 1325 aa12.6□□□□□ -0.39
HNRNPC-228ENST00000557033 ATP5J2-PTCD1G3V325 749 aa12.59□□□□□ -0.39
HNRNPC-228ENST00000557033 PIK3CDO00329 1044 aa12.59□□□□□ -0.39
HNRNPC-228ENST00000557033 HSP90B1P14625 803 aaKnown RBP12.59□□□□□ -0.39
HNRNPC-228ENST00000557033 FUT2Q10981 343 aa12.59□□□□□ -0.39
HNRNPC-228ENST00000557033 SF3B3Q15393 1217 aaKnown RBP12.59□□□□□ -0.39
HNRNPC-228ENST00000557033 TMC4Q7Z404 712 aa12.59□□□□□ -0.39
HNRNPC-228ENST00000557033 SUPT20HQ8NEM7 779 aa12.59□□□□□ -0.39
HNRNPC-228ENST00000557033 FAM89AQ96GI7 184 aa12.59□□□□□ -0.39
HNRNPC-228ENST00000557033 KIAA1468Q9P260 1216 aa12.59□□□□□ -0.39
HNRNPC-228ENST00000557033 TCERG1O14776 1098 aaKnown RBP12.58□□□□□ -0.4
HNRNPC-228ENST00000557033 GRAPQ13588 217 aa12.58□□□□□ -0.4
HNRNPC-228ENST00000557033 GPC2Q8N158 579 aa12.58□□□□□ -0.4
HNRNPC-228ENST00000557033 DNAJC5GQ8N7S2 189 aa12.58□□□□□ -0.4
HNRNPC-228ENST00000557033 TSPYL6Q8N831 410 aa12.58□□□□□ -0.4
HNRNPC-228ENST00000557033 ZBTB38Q8NAP3 1195 aaPredicted RBP12.58□□□□□ -0.4
HNRNPC-228ENST00000557033 CCDC191Q8NCU4 936 aa12.58□□□□□ -0.4
HNRNPC-228ENST00000557033 GRAPLQ8TC17 118 aaPredicted RBP12.58□□□□□ -0.4
HNRNPC-228ENST00000557033 TSR2Q969E8 191 aaKnown RBP12.58□□□□□ -0.4
HNRNPC-228ENST00000557033 STK31Q9BXU1 1019 aa12.58□□□□□ -0.4
HNRNPC-228ENST00000557033 SCN4AP35499 1836 aa12.58□□□□□ -0.4
HNRNPC-228ENST00000557033 LAMB2P55268 1798 aa12.57□□□□□ -0.4
HNRNPC-228ENST00000557033 EIF6P56537 245 aaKnown RBP12.57□□□□□ -0.4
HNRNPC-228ENST00000557033 TWISTNBQ3B726 338 aaPredicted RBP12.57□□□□□ -0.4
HNRNPC-228ENST00000557033 LARGE2Q8N3Y3 721 aa12.57□□□□□ -0.4
HNRNPC-228ENST00000557033 METTL22Q9BUU2 404 aaPredicted RBP12.57□□□□□ -0.4
HNRNPC-228ENST00000557033 RTFDC1Q9BY42 306 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms