RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 ORC1Q13415 861 aa7.7□□□□□ -1.18
ATXN3-246ENST00000557030 KIAA0319Q5VV43 1072 aa7.7□□□□□ -1.18
ATXN3-246ENST00000557030 KIAA1211Q6ZU35 1233 aa7.7□□□□□ -1.18
ATXN3-246ENST00000557030 DDX3YO15523 660 aaKnown RBP7.69□□□□□ -1.18
ATXN3-246ENST00000557030 NEFLP07196 543 aa7.69□□□□□ -1.18
ATXN3-246ENST00000557030 FAM117BQ6P1L5 589 aa7.69□□□□□ -1.18
ATXN3-246ENST00000557030 AGGF1Q8N302 714 aaeCLIP7.69□□□□□ -1.18
ATXN3-246ENST00000557030 UBL7Q96S82 380 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-246ENST00000557030 TRAIPQ9BWF2 469 aa7.69□□□□□ -1.18
ATXN3-246ENST00000557030 DNAJC25Q9H1X3 360 aa7.69□□□□□ -1.18
ATXN3-246ENST00000557030 SOX17Q9H6I2 414 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-246ENST00000557030 CPNE3O75131 537 aaKnown RBP7.68□□□□□ -1.18
ATXN3-246ENST00000557030 CABP4P57796 275 aa7.68□□□□□ -1.18
ATXN3-246ENST00000557030 DMRTB1Q96MA1 342 aa7.68□□□□□ -1.18
ATXN3-246ENST00000557030 METTL12A8MUP2 240 aa7.67□□□□□ -1.18
ATXN3-246ENST00000557030 ESRRAP11474 423 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-246ENST00000557030 GRIA4P48058 902 aa7.67□□□□□ -1.18
ATXN3-246ENST00000557030 PRSS36Q5K4E3 855 aa7.67□□□□□ -1.18
ATXN3-246ENST00000557030 NRSN2Q9GZP1 204 aa7.67□□□□□ -1.18
ATXN3-246ENST00000557030 NIF3L1Q9GZT8 377 aa7.67□□□□□ -1.18
ATXN3-246ENST00000557030 EIF1AYO14602 144 aaKnown RBP7.66□□□□□ -1.18
ATXN3-246ENST00000557030 KCNA1Q09470 495 aa7.66□□□□□ -1.18
ATXN3-246ENST00000557030 C19orf57Q0VDD7 668 aa7.66□□□□□ -1.18
ATXN3-246ENST00000557030 DSC3Q14574 896 aa7.66□□□□□ -1.18
ATXN3-246ENST00000557030 PRR23CQ6ZRP0 262 aa7.66□□□□□ -1.18
ATXN3-246ENST00000557030 ACAD11Q709F0 780 aa7.66□□□□□ -1.18
ATXN3-246ENST00000557030 TMC7Q7Z402 723 aa7.66□□□□□ -1.18
ATXN3-246ENST00000557030 ARMC10Q8N2F6 343 aa7.66□□□□□ -1.18
ATXN3-246ENST00000557030 UBASH3BQ8TF42 649 aa7.66□□□□□ -1.18
ATXN3-246ENST00000557030 DCTN4Q9UJW0 460 aa7.66□□□□□ -1.18
ATXN3-246ENST00000557030 A0A096LPE4 126 aa7.65□□□□□ -1.18
ATXN3-246ENST00000557030 A0A1W2PPZ6 126 aa7.65□□□□□ -1.18
ATXN3-246ENST00000557030 FAM177BA6PVY3 158 aa7.65□□□□□ -1.18
ATXN3-246ENST00000557030 IKBKEQ14164 716 aa7.65□□□□□ -1.18
ATXN3-246ENST00000557030 DUOXA2Q1HG44 320 aa7.65□□□□□ -1.18
ATXN3-246ENST00000557030 CCDC74AQ96AQ1 378 aa7.65□□□□□ -1.18
ATXN3-246ENST00000557030 FAM46AQ96IP4 442 aaKnown RBP7.65□□□□□ -1.18
ATXN3-246ENST00000557030 CSRNP1Q96S65 589 aa7.65□□□□□ -1.18
ATXN3-246ENST00000557030 LIN7BQ9HAP6 207 aa7.65□□□□□ -1.18
ATXN3-246ENST00000557030 NPHS2Q9NP85 383 aa7.65□□□□□ -1.18
ATXN3-246ENST00000557030 MEGF11A6BM72 1044 aa7.64□□□□□ -1.19
ATXN3-246ENST00000557030 PDIA4P13667 645 aaKnown RBP7.64□□□□□ -1.19
ATXN3-246ENST00000557030 ITPKAP23677 461 aa7.64□□□□□ -1.19
ATXN3-246ENST00000557030 ZNF423Q2M1K9 1284 aa7.64□□□□□ -1.19
ATXN3-246ENST00000557030 SPRED3Q2MJR0 410 aa7.64□□□□□ -1.19
ATXN3-246ENST00000557030 PRPF40BQ6NWY9 871 aaKnown RBP7.64□□□□□ -1.19
ATXN3-246ENST00000557030 GLIS3Q8NEA6 775 aa7.64□□□□□ -1.19
ATXN3-246ENST00000557030 ASAP3Q8TDY4 903 aa7.64□□□□□ -1.19
ATXN3-246ENST00000557030 IVNS1ABPQ9Y6Y0 642 aa7.64□□□□□ -1.19
ATXN3-246ENST00000557030 GLB1P16278 677 aa7.63□□□□□ -1.19
ATXN3-246ENST00000557030 UVSSAQ2YD98 709 aa7.63□□□□□ -1.19
ATXN3-246ENST00000557030 AEBP1Q8IUX7 1158 aa7.63□□□□□ -1.19
ATXN3-246ENST00000557030 SLC7A3Q8WY07 619 aa7.63□□□□□ -1.19
ATXN3-246ENST00000557030 CLEC4MQ9H2X3 399 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-246ENST00000557030 ABCB6Q9NP58 842 aa7.63□□□□□ -1.19
ATXN3-246ENST00000557030 TREHO43280 583 aa7.62□□□□□ -1.19
ATXN3-246ENST00000557030 DLGAP3O95886 979 aa7.62□□□□□ -1.19
ATXN3-246ENST00000557030 ARL4DP49703 201 aa7.62□□□□□ -1.19
ATXN3-246ENST00000557030 NLRP12P59046 1061 aa7.62□□□□□ -1.19
ATXN3-246ENST00000557030 PTPN12Q05209 780 aaKnown RBP7.62□□□□□ -1.19
ATXN3-246ENST00000557030 TMPRSS13Q9BYE2 586 aa7.62□□□□□ -1.19
ATXN3-246ENST00000557030 CEP41Q9BYV8 373 aa7.62□□□□□ -1.19
ATXN3-246ENST00000557030 BIN2Q9UBW5 565 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-246ENST00000557030 LOC100289279A0A1B0GTE1 492 aa7.61□□□□□ -1.19
ATXN3-246ENST00000557030 RNF208Q9H0X6 261 aa7.61□□□□□ -1.19
ATXN3-246ENST00000557030 ZNF576Q9H609 170 aa7.61□□□□□ -1.19
ATXN3-246ENST00000557030 SUGCTQ9HAC7 445 aa7.61□□□□□ -1.19
ATXN3-246ENST00000557030 B3GALT4O96024 378 aa7.6□□□□□ -1.19
ATXN3-246ENST00000557030 PCDH1Q08174 1060 aa7.6□□□□□ -1.19
ATXN3-246ENST00000557030 ANKRD34AQ69YU3 496 aa7.6□□□□□ -1.19
ATXN3-246ENST00000557030 SLC51AQ86UW1 340 aa7.6□□□□□ -1.19
ATXN3-246ENST00000557030 Q8N3U1 123 aa7.6□□□□□ -1.19
ATXN3-246ENST00000557030 TMC1Q8TDI8 760 aa7.6□□□□□ -1.19
ATXN3-246ENST00000557030 EPS8L3Q8TE67 593 aaKnown RBP7.6□□□□□ -1.19
ATXN3-246ENST00000557030 EHD4Q9H223 541 aa7.6□□□□□ -1.19
ATXN3-246ENST00000557030 TIAF1O95411 115 aa7.59□□□□□ -1.19
ATXN3-246ENST00000557030 PREPP48147 710 aa7.59□□□□□ -1.19
ATXN3-246ENST00000557030 GRM2Q14416 872 aa7.59□□□□□ -1.19
ATXN3-246ENST00000557030 ENOX2Q16206 610 aaKnown RBP7.59□□□□□ -1.19
ATXN3-246ENST00000557030 ZMYM1Q5SVZ6 1142 aa7.59□□□□□ -1.19
ATXN3-246ENST00000557030 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-246ENST00000557030 MYRFLQ96LU7 910 aa7.59□□□□□ -1.19
ATXN3-246ENST00000557030 TRIM56Q9BRZ2 755 aaKnown RBP7.59□□□□□ -1.19
ATXN3-246ENST00000557030 RUSC1Q9BVN2 902 aa7.59□□□□□ -1.19
ATXN3-246ENST00000557030 RAXQ9Y2V3 346 aa7.59□□□□□ -1.19
ATXN3-246ENST00000557030 EIF4EBP3O60516 100 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-246ENST00000557030 MAPK1P28482 360 aa7.58□□□□□ -1.2
ATXN3-246ENST00000557030 FMR1Q06787 632 aaKnown RBP eCLIP7.58□□□□□ -1.2
ATXN3-246ENST00000557030 SMG8Q8ND04 991 aaKnown RBP7.58□□□□□ -1.2
ATXN3-246ENST00000557030 ASB16Q96NS5 453 aa7.58□□□□□ -1.2
ATXN3-246ENST00000557030 TMEM238LA0A1B0GVL6 79 aa7.57□□□□□ -1.2
ATXN3-246ENST00000557030 CTSBP07858 339 aa7.57□□□□□ -1.2
ATXN3-246ENST00000557030 GSTM4Q03013 218 aa7.57□□□□□ -1.2
ATXN3-246ENST00000557030 RPS26P11Q5JNZ5 115 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-246ENST00000557030 PI16Q6UXB8 463 aa7.57□□□□□ -1.2
ATXN3-246ENST00000557030 DHX15O43143 795 aaKnown RBP7.56□□□□□ -1.2
ATXN3-246ENST00000557030 FSTP19883 344 aa7.56□□□□□ -1.2
ATXN3-246ENST00000557030 PLCB3Q01970 1234 aa7.56□□□□□ -1.2
ATXN3-246ENST00000557030 FAAP100Q0VG06 881 aa7.56□□□□□ -1.2
ATXN3-246ENST00000557030 EXOSC6Q5RKV6 272 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms