RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, human

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLIRP-208	ENST00000556956	IFT43	Q96FT9	208 aa		4.14	□□□□□ -1.75
SLIRP-208	ENST00000556956	RC3H2	Q9HBD1	1191 aa	Known RBP	4.14	□□□□□ -1.75
SLIRP-208	ENST00000556956	ZC3H7B	Q9UGR2	993 aa	Known RBP	4.14	□□□□□ -1.75
SLIRP-208	ENST00000556956	SART1	O43290	800 aa	Known RBP	4.13	□□□□□ -1.75
SLIRP-208	ENST00000556956	MICAL2	O94851	1124 aa		4.13	□□□□□ -1.75
SLIRP-208	ENST00000556956	IGHA2	P01877	340 aa		4.13	□□□□□ -1.75
SLIRP-208	ENST00000556956	RNASE1	P07998	156 aa	Known RBP	4.13	□□□□□ -1.75
SLIRP-208	ENST00000556956	MAP4	P27816	1152 aa	Known RBP	4.13	□□□□□ -1.75
SLIRP-208	ENST00000556956	DGKZ	Q13574	1117 aa		4.13	□□□□□ -1.75
SLIRP-208	ENST00000556956	C14orf37	Q86TY3	774 aa		4.13	□□□□□ -1.75
SLIRP-208	ENST00000556956	BCL7C	Q8WUZ0	217 aa	Predicted RBP	4.13	□□□□□ -1.75
SLIRP-208	ENST00000556956	PPP1R16B	Q96T49	567 aa		4.13	□□□□□ -1.75
SLIRP-208	ENST00000556956	ANP32E	Q9BTT0	268 aa		4.13	□□□□□ -1.75
SLIRP-208	ENST00000556956	ADAMTS6	Q9UKP5	1117 aa		4.13	□□□□□ -1.75
SLIRP-208	ENST00000556956	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	4.12	□□□□□ -1.75
SLIRP-208	ENST00000556956	ZNF503-AS2	A6NEH8	195 aa		4.12	□□□□□ -1.75
SLIRP-208	ENST00000556956	PRMT3	O60678	531 aa		4.12	□□□□□ -1.75
SLIRP-208	ENST00000556956	LGR5	O75473	907 aa		4.12	□□□□□ -1.75
SLIRP-208	ENST00000556956	INPP5B	P32019	993 aa		4.12	□□□□□ -1.75
SLIRP-208	ENST00000556956	IDH3A	P50213	366 aa		4.12	□□□□□ -1.75
SLIRP-208	ENST00000556956	SRPK2	P78362	688 aa	Known RBP	4.12	□□□□□ -1.75
SLIRP-208	ENST00000556956	SGO2	Q562F6	1265 aa		4.12	□□□□□ -1.75
SLIRP-208	ENST00000556956	C16orf46	Q6P387	395 aa		4.12	□□□□□ -1.75
SLIRP-208	ENST00000556956	SYDE1	Q6ZW31	735 aa	Predicted RBP	4.12	□□□□□ -1.75
SLIRP-208	ENST00000556956	KRT25	Q7Z3Z0	450 aa		4.12	□□□□□ -1.75
SLIRP-208	ENST00000556956	UBASH3B	Q8TF42	649 aa		4.12	□□□□□ -1.75
SLIRP-208	ENST00000556956	PRIMPOL	Q96LW4	560 aa		4.12	□□□□□ -1.75
SLIRP-208	ENST00000556956	MBNL3	Q9NUK0	354 aa	Known RBP	4.12	□□□□□ -1.75
SLIRP-208	ENST00000556956	KLK14	Q9P0G3	267 aa		4.12	□□□□□ -1.75
SLIRP-208	ENST00000556956	DMGDH	Q9UI17	866 aa	Known RBP	4.12	□□□□□ -1.75
SLIRP-208	ENST00000556956	FNDC3A	Q9Y2H6	1198 aa	Known RBP	4.12	□□□□□ -1.75
SLIRP-208	ENST00000556956	TNIK	Q9UKE5	1360 aa		4.12	□□□□□ -1.75
SLIRP-208	ENST00000556956		A0A0G2JLL6	359 aa	Predicted RBP	4.11	□□□□□ -1.75
SLIRP-208	ENST00000556956	LINC01387	J3KSC0	135 aa		4.11	□□□□□ -1.75
SLIRP-208	ENST00000556956		J3QW42	95 aa		4.11	□□□□□ -1.75
SLIRP-208	ENST00000556956	DDX3Y	O15523	660 aa	Known RBP	4.11	□□□□□ -1.75
SLIRP-208	ENST00000556956	TARS	P26639	723 aa	Known RBP	4.11	□□□□□ -1.75
SLIRP-208	ENST00000556956	ADM	P35318	185 aa		4.11	□□□□□ -1.75
SLIRP-208	ENST00000556956	DUOXA2	Q1HG44	320 aa		4.11	□□□□□ -1.75
SLIRP-208	ENST00000556956	TXNDC11	Q6PKC3	985 aa		4.11	□□□□□ -1.75
SLIRP-208	ENST00000556956	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	4.11	□□□□□ -1.75
SLIRP-208	ENST00000556956	PIK3R5	Q8WYR1	880 aa		4.11	□□□□□ -1.75
SLIRP-208	ENST00000556956	CLP1	Q92989	425 aa	Known RBP	4.11	□□□□□ -1.75
SLIRP-208	ENST00000556956	METTL22	Q9BUU2	404 aa	Predicted RBP	4.11	□□□□□ -1.75
SLIRP-208	ENST00000556956	QTRT2	Q9H974	415 aa	Known RBP	4.11	□□□□□ -1.75
SLIRP-208	ENST00000556956	TRIM33	Q9UPN9	1127 aa		4.11	□□□□□ -1.75
SLIRP-208	ENST00000556956	MTMR7	Q9Y216	660 aa		4.11	□□□□□ -1.75
SLIRP-208	ENST00000556956	SLC5A6	Q9Y289	635 aa		4.11	□□□□□ -1.75
SLIRP-208	ENST00000556956	HIF3A	Q9Y2N7	669 aa		4.11	□□□□□ -1.75
SLIRP-208	ENST00000556956	RTCB	Q9Y3I0	505 aa	Known RBP	4.11	□□□□□ -1.75
SLIRP-208	ENST00000556956	PITPNM2	Q9BZ72	1349 aa		4.11	□□□□□ -1.75
SLIRP-208	ENST00000556956	EGFR	P00533	1210 aa		4.1	□□□□□ -1.75
SLIRP-208	ENST00000556956	RPLP1	P05386	114 aa	Known RBP	4.1	□□□□□ -1.75
SLIRP-208	ENST00000556956	FAM69C	Q0P6D2	419 aa		4.1	□□□□□ -1.75
SLIRP-208	ENST00000556956	FKBP5	Q13451	457 aa	Predicted RBP	4.1	□□□□□ -1.75
SLIRP-208	ENST00000556956	COX20	Q5RI15	118 aa		4.1	□□□□□ -1.75
SLIRP-208	ENST00000556956	TREML1	Q86YW5	311 aa		4.1	□□□□□ -1.75
SLIRP-208	ENST00000556956	LRRN4CL	Q8ND94	238 aa		4.1	□□□□□ -1.75
SLIRP-208	ENST00000556956	TTC16	Q8NEE8	873 aa		4.1	□□□□□ -1.75
SLIRP-208	ENST00000556956	CARD10	Q9BWT7	1032 aa		4.1	□□□□□ -1.75
SLIRP-208	ENST00000556956	RBSN	Q9H1K0	784 aa		4.1	□□□□□ -1.75
SLIRP-208	ENST00000556956	CXXC1	Q9P0U4	656 aa	Predicted RBP	4.1	□□□□□ -1.75
SLIRP-208	ENST00000556956	ZMIZ1	Q9ULJ6	1067 aa		4.1	□□□□□ -1.75
SLIRP-208	ENST00000556956	BCS1L	Q9Y276	419 aa		4.1	□□□□□ -1.75
SLIRP-208	ENST00000556956	SUPT16H	Q9Y5B9	1047 aa	Known RBP	4.1	□□□□□ -1.75
SLIRP-208	ENST00000556956	EEA1	Q15075	1411 aa		4.1	□□□□□ -1.75
SLIRP-208	ENST00000556956	ARID3C	A6NKF2	412 aa		4.09	□□□□□ -1.75
SLIRP-208	ENST00000556956	FAM170B	A6NMN3	283 aa		4.09	□□□□□ -1.75
SLIRP-208	ENST00000556956	NPIPB6	E9PJ23	425 aa		4.09	□□□□□ -1.75
SLIRP-208	ENST00000556956	ADAM11	O75078	769 aa		4.09	□□□□□ -1.75
SLIRP-208	ENST00000556956	XYLB	O75191	536 aa		4.09	□□□□□ -1.75
SLIRP-208	ENST00000556956	RARA	P10276	462 aa		4.09	□□□□□ -1.75
SLIRP-208	ENST00000556956	PCSK2	P16519	638 aa		4.09	□□□□□ -1.75
SLIRP-208	ENST00000556956	PDE4C	Q08493	712 aa		4.09	□□□□□ -1.75
SLIRP-208	ENST00000556956	OCLN	Q16625	522 aa		4.09	□□□□□ -1.75
SLIRP-208	ENST00000556956	TMEM164	Q5U3C3	297 aa		4.09	□□□□□ -1.75
SLIRP-208	ENST00000556956	CMTR1	Q8N1G2	835 aa	Known RBP	4.09	□□□□□ -1.75
SLIRP-208	ENST00000556956	ABTB2	Q8N961	1025 aa		4.09	□□□□□ -1.75
SLIRP-208	ENST00000556956	STK32A	Q8WU08	396 aa		4.09	□□□□□ -1.75
SLIRP-208	ENST00000556956	STIM2	Q9P246	746 aa		4.09	□□□□□ -1.75
SLIRP-208	ENST00000556956	LRFN2	Q9ULH4	789 aa		4.09	□□□□□ -1.75
SLIRP-208	ENST00000556956	PPME1	Q9Y570	386 aa		4.09	□□□□□ -1.75
SLIRP-208	ENST00000556956	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	4.08	□□□□□ -1.76
SLIRP-208	ENST00000556956	OPLAH	O14841	1288 aa		4.08	□□□□□ -1.76
SLIRP-208	ENST00000556956	SASH3	O75995	380 aa		4.08	□□□□□ -1.76
SLIRP-208	ENST00000556956	PSAP	P07602	524 aa		4.08	□□□□□ -1.76
SLIRP-208	ENST00000556956	ATP2B4	P23634	1241 aa		4.08	□□□□□ -1.76
SLIRP-208	ENST00000556956	NRL	P54845	237 aa		4.08	□□□□□ -1.76
SLIRP-208	ENST00000556956	BNIP3	Q12983	259 aa		4.08	□□□□□ -1.76
SLIRP-208	ENST00000556956	CEP162	Q5TB80	1403 aa		4.08	□□□□□ -1.76
SLIRP-208	ENST00000556956	PRRT2	Q7Z6L0	340 aa	Predicted RBP	4.08	□□□□□ -1.76
SLIRP-208	ENST00000556956	RGL4	Q8IZJ4	473 aa		4.08	□□□□□ -1.76
SLIRP-208	ENST00000556956	CACTIN-AS1	Q8N1I8	211 aa		4.08	□□□□□ -1.76
SLIRP-208	ENST00000556956	LIN37	Q96GY3	246 aa	Predicted RBP	4.08	□□□□□ -1.76
SLIRP-208	ENST00000556956	BCL11A	Q9H165	835 aa		4.08	□□□□□ -1.76
SLIRP-208	ENST00000556956	LRRC4C	Q9HCJ2	640 aa		4.08	□□□□□ -1.76
SLIRP-208	ENST00000556956	BICRA	Q9NZM4	1560 aa		4.07	□□□□□ -1.76
SLIRP-208	ENST00000556956	GHRH	P01286	108 aa		4.07	□□□□□ -1.76
SLIRP-208	ENST00000556956	SYN1	P17600	705 aa		4.07	□□□□□ -1.76
SLIRP-208	ENST00000556956	FUT4	P22083	530 aa		4.07	□□□□□ -1.76

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