RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 MAP3K15Q6ZN16 1313 aa5.76□□□□□ -1.49
ATXN3-242ENST00000556644 LAMB1P07942 1786 aa5.76□□□□□ -1.49
ATXN3-242ENST00000556644 LAMB2P55268 1798 aa5.76□□□□□ -1.49
ATXN3-242ENST00000556644 BTBD11A6QL63 1104 aa5.76□□□□□ -1.49
ATXN3-242ENST00000556644 TLR2O60603 784 aa5.76□□□□□ -1.49
ATXN3-242ENST00000556644 INHAP05111 366 aa5.76□□□□□ -1.49
ATXN3-242ENST00000556644 IL13P35225 146 aa5.76□□□□□ -1.49
ATXN3-242ENST00000556644 TMEM31Q5JXX7 168 aa5.76□□□□□ -1.49
ATXN3-242ENST00000556644 KIF6Q6ZMV9 814 aa5.76□□□□□ -1.49
ATXN3-242ENST00000556644 IL27Q8NEV9 243 aa5.76□□□□□ -1.49
ATXN3-242ENST00000556644 TBC1D16Q8TBP0 767 aa5.76□□□□□ -1.49
ATXN3-242ENST00000556644 CELF1Q92879 486 aaKnown RBP5.76□□□□□ -1.49
ATXN3-242ENST00000556644 EYA3Q99504 573 aa5.76□□□□□ -1.49
ATXN3-242ENST00000556644 GABRQQ9UN88 632 aa5.76□□□□□ -1.49
ATXN3-242ENST00000556644 NUP98P52948 1817 aa5.76□□□□□ -1.49
ATXN3-242ENST00000556644 SIPA1L3O60292 1781 aaPredicted RBP5.75□□□□□ -1.49
ATXN3-242ENST00000556644 PPP1R12BO60237 982 aaPredicted RBP5.75□□□□□ -1.49
ATXN3-242ENST00000556644 UFL1O94874 794 aa5.75□□□□□ -1.49
ATXN3-242ENST00000556644 GNRH1P01148 92 aa5.75□□□□□ -1.49
ATXN3-242ENST00000556644 SNRPA1P09661 255 aaKnown RBP5.75□□□□□ -1.49
ATXN3-242ENST00000556644 MAP3K11Q16584 847 aa5.75□□□□□ -1.49
ATXN3-242ENST00000556644 APOBEC3FQ8IUX4 373 aaKnown RBP5.75□□□□□ -1.49
ATXN3-242ENST00000556644 ZNF34Q8IZ26 560 aa5.75□□□□□ -1.49
ATXN3-242ENST00000556644 UTP14AQ9BVJ6 771 aaKnown RBP5.75□□□□□ -1.49
ATXN3-242ENST00000556644 ZC3H12CQ9C0D7 883 aaKnown RBP5.75□□□□□ -1.49
ATXN3-242ENST00000556644 DEFB129Q9H1M3 183 aa5.75□□□□□ -1.49
ATXN3-242ENST00000556644 THEGQ9P2T0 379 aa5.75□□□□□ -1.49
ATXN3-242ENST00000556644 TAOK2Q9UL54 1235 aa5.75□□□□□ -1.49
ATXN3-242ENST00000556644 CDH23Q9H251 3354 aa5.75□□□□□ -1.49
ATXN3-242ENST00000556644 FAM205AQ6ZU69 1335 aa5.74□□□□□ -1.49
ATXN3-242ENST00000556644 USP17L3A6NCW0 530 aa5.74□□□□□ -1.49
ATXN3-242ENST00000556644 USP17L4A6NCW7 530 aa5.74□□□□□ -1.49
ATXN3-242ENST00000556644 C19orf67A6NJJ6 358 aa5.74□□□□□ -1.49
ATXN3-242ENST00000556644 ERVV-1B6SEH8 477 aa5.74□□□□□ -1.49
ATXN3-242ENST00000556644 BTBD19C9JJ37 291 aa5.74□□□□□ -1.49
ATXN3-242ENST00000556644 ADCY3O60266 1144 aa5.74□□□□□ -1.49
ATXN3-242ENST00000556644 USP2O75604 605 aaPredicted RBP5.74□□□□□ -1.49
ATXN3-242ENST00000556644 MYL6BP14649 208 aa5.74□□□□□ -1.49
ATXN3-242ENST00000556644 HOXD10P28358 340 aa5.74□□□□□ -1.49
ATXN3-242ENST00000556644 IREB2P48200 963 aaKnown RBP5.74□□□□□ -1.49
ATXN3-242ENST00000556644 GRIN2CQ14957 1233 aa5.74□□□□□ -1.49
ATXN3-242ENST00000556644 CCDC85BQ15834 202 aaPredicted RBP5.74□□□□□ -1.49
ATXN3-242ENST00000556644 SLC10A5Q5PT55 438 aa5.74□□□□□ -1.49
ATXN3-242ENST00000556644 C9orf50Q5SZB4 431 aa5.74□□□□□ -1.49
ATXN3-242ENST00000556644 NBPF12Q5TAG4 269 aaPredicted RBP5.74□□□□□ -1.49
ATXN3-242ENST00000556644 USP17L1Q7RTZ2 530 aa5.74□□□□□ -1.49
ATXN3-242ENST00000556644 PPP1R42Q7Z4L9 355 aa5.74□□□□□ -1.49
ATXN3-242ENST00000556644 SLAIN1Q8ND83 568 aa5.74□□□□□ -1.49
ATXN3-242ENST00000556644 ATXN2LQ8WWM7 1075 aaKnown RBP5.74□□□□□ -1.49
ATXN3-242ENST00000556644 NBPF3Q9H094 633 aa5.74□□□□□ -1.49
ATXN3-242ENST00000556644 CRISPLD2Q9H0B8 497 aa5.74□□□□□ -1.49
ATXN3-242ENST00000556644 C11orf49Q9H6J7 331 aa5.74□□□□□ -1.49
ATXN3-242ENST00000556644 C11orf16Q9NQ32 467 aa5.74□□□□□ -1.49
ATXN3-242ENST00000556644 RRP7AQ9Y3A4 280 aaKnown RBP5.74□□□□□ -1.49
ATXN3-242ENST00000556644 OTOFQ9HC10 1997 aa5.74□□□□□ -1.49
ATXN3-242ENST00000556644 TCF20Q9UGU0 1960 aaKnown RBP5.74□□□□□ -1.49
ATXN3-242ENST00000556644 DDX60LQ5H9U9 1706 aaKnown RBP5.74□□□□□ -1.49
ATXN3-242ENST00000556644 ADGRA2Q96PE1 1338 aa5.74□□□□□ -1.49
ATXN3-242ENST00000556644 CLRN2A0PK11 232 aa5.73□□□□□ -1.49
ATXN3-242ENST00000556644 WDHD1O75717 1129 aaPredicted RBP5.73□□□□□ -1.49
ATXN3-242ENST00000556644 GTF2A2P52657 109 aa5.73□□□□□ -1.49
ATXN3-242ENST00000556644 MRPS5P82675 430 aaKnown RBP5.73□□□□□ -1.49
ATXN3-242ENST00000556644 SHHQ15465 462 aa5.73□□□□□ -1.49
ATXN3-242ENST00000556644 POTEEQ6S8J3 1075 aa5.73□□□□□ -1.49
ATXN3-242ENST00000556644 ANKRD13AQ8IZ07 590 aa5.73□□□□□ -1.49
ATXN3-242ENST00000556644 OGFOD1Q8N543 542 aa5.73□□□□□ -1.49
ATXN3-242ENST00000556644 ZBTB38Q8NAP3 1195 aaPredicted RBP5.73□□□□□ -1.49
ATXN3-242ENST00000556644 LBHD1Q9BQE6 289 aaPredicted RBP5.73□□□□□ -1.49
ATXN3-242ENST00000556644 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.73□□□□□ -1.491e-11■■■■□ 25.2
ATXN3-242ENST00000556644 PAK6Q9NQU5 681 aaPredicted RBP5.73□□□□□ -1.49
ATXN3-242ENST00000556644 PCDHAC2Q9Y5I4 1007 aa5.73□□□□□ -1.49
ATXN3-242ENST00000556644 PFASO15067 1338 aa5.73□□□□□ -1.49
ATXN3-242ENST00000556644 ZDBF2Q9HCK1 2354 aa5.72□□□□□ -1.49
ATXN3-242ENST00000556644 GNAT3A8MTJ3 354 aa5.72□□□□□ -1.49
ATXN3-242ENST00000556644 PRKAR2AP13861 404 aaKnown RBP5.72□□□□□ -1.49
ATXN3-242ENST00000556644 FLT3LGP49771 235 aa5.72□□□□□ -1.49
ATXN3-242ENST00000556644 NHLH1Q02575 133 aa5.72□□□□□ -1.49
ATXN3-242ENST00000556644 LRRC26Q2I0M4 334 aa5.72□□□□□ -1.49
ATXN3-242ENST00000556644 PARP10Q53GL7 1025 aa5.72□□□□□ -1.49
ATXN3-242ENST00000556644 C17orf99Q6UX52 265 aa5.72□□□□□ -1.49
ATXN3-242ENST00000556644 TMC4Q7Z404 712 aa5.72□□□□□ -1.49
ATXN3-242ENST00000556644 KIAA0825Q8IV33 1275 aa5.72□□□□□ -1.49
ATXN3-242ENST00000556644 NECTIN2Q92692 538 aa5.72□□□□□ -1.49
ATXN3-242ENST00000556644 KHSRPQ92945 711 aaKnown RBP eCLIP5.72□□□□□ -1.49
ATXN3-242ENST00000556644 VEZTQ9HBM0 779 aa5.72□□□□□ -1.49
ATXN3-242ENST00000556644 ANKIB1Q9P2G1 1089 aa5.72□□□□□ -1.49
ATXN3-242ENST00000556644 ANKRD36CQ5JPF3 1778 aa5.72□□□□□ -1.49
ATXN3-242ENST00000556644 AOX1Q06278 1338 aa5.72□□□□□ -1.49
ATXN3-242ENST00000556644 PSME4Q14997 1843 aa5.71□□□□□ -1.49
ATXN3-242ENST00000556644 COL1A1P02452 1464 aaPredicted RBP5.71□□□□□ -1.49
ATXN3-242ENST00000556644 KRT37O76014 449 aa5.71□□□□□ -1.5
ATXN3-242ENST00000556644 KCNQ1P51787 676 aa5.71□□□□□ -1.5
ATXN3-242ENST00000556644 FCGRTP55899 365 aa5.71□□□□□ -1.5
ATXN3-242ENST00000556644 TFF2Q03403 129 aa5.71□□□□□ -1.5
ATXN3-242ENST00000556644 VGLL4Q14135 290 aa5.71□□□□□ -1.5
ATXN3-242ENST00000556644 PDE3AQ14432 1141 aa5.71□□□□□ -1.5
ATXN3-242ENST00000556644 DACT2Q5SW24 774 aa5.71□□□□□ -1.5
ATXN3-242ENST00000556644 SAMD1Q6SPF0 538 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-242ENST00000556644 GIGYF2Q6Y7W6 1299 aaKnown RBP5.71□□□□□ -1.5
ATXN3-242ENST00000556644 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms