RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 FANCD2Q9BXW9 1451 aa7.64□□□□□ -1.19
SRP54-211ENST00000556445 EDN3P14138 238 aa7.64□□□□□ -1.19
SRP54-211ENST00000556445 MFAP1P55081 439 aaKnown RBP7.64□□□□□ -1.19
SRP54-211ENST00000556445 RSPO4Q2I0M5 234 aaPredicted RBP7.64□□□□□ -1.19
SRP54-211ENST00000556445 NKAPLQ5M9Q1 402 aa7.64□□□□□ -1.19
SRP54-211ENST00000556445 WFDC12Q8WWY7 111 aa7.64□□□□□ -1.19
SRP54-211ENST00000556445 NXPE3Q969Y0 559 aa7.64□□□□□ -1.19
SRP54-211ENST00000556445 CITED4Q96RK1 184 aa7.64□□□□□ -1.19
SRP54-211ENST00000556445 KIF27Q86VH2 1401 aa7.63□□□□□ -1.19
SRP54-211ENST00000556445 POLR3DP05423 398 aaPredicted RBP7.63□□□□□ -1.19
SRP54-211ENST00000556445 ITGB7P26010 798 aa7.63□□□□□ -1.19
SRP54-211ENST00000556445 NOS3P29474 1203 aa7.63□□□□□ -1.19
SRP54-211ENST00000556445 CDC25BP30305 580 aa7.63□□□□□ -1.19
SRP54-211ENST00000556445 RBM25P49756 843 aaKnown RBP7.63□□□□□ -1.19
SRP54-211ENST00000556445 ZNF428Q96B54 188 aa7.63□□□□□ -1.19
SRP54-211ENST00000556445 SOX13Q9UN79 622 aa7.63□□□□□ -1.19
SRP54-211ENST00000556445 PDS5BQ9NTI5 1447 aa7.62□□□□□ -1.19
SRP54-211ENST00000556445 FSCN2O14926 492 aa7.62□□□□□ -1.19
SRP54-211ENST00000556445 GPR182O15218 404 aa7.62□□□□□ -1.19
SRP54-211ENST00000556445 IREB2P48200 963 aaKnown RBP7.62□□□□□ -1.19
SRP54-211ENST00000556445 PDE3BQ13370 1112 aa7.62□□□□□ -1.19
SRP54-211ENST00000556445 FOXD4L6Q3SYB3 417 aaPredicted RBP7.62□□□□□ -1.19
SRP54-211ENST00000556445 USPL1Q5W0Q7 1092 aa7.62□□□□□ -1.19
SRP54-211ENST00000556445 FOXD4L3Q6VB84 417 aaPredicted RBP7.62□□□□□ -1.19
SRP54-211ENST00000556445 TMEM130Q8N3G9 435 aa7.62□□□□□ -1.19
SRP54-211ENST00000556445 DCAF11Q8TEB1 546 aa7.62□□□□□ -1.19
SRP54-211ENST00000556445 FOXD4L4Q8WXT5 416 aaPredicted RBP7.62□□□□□ -1.19
SRP54-211ENST00000556445 CARD10Q9BWT7 1032 aa7.62□□□□□ -1.19
SRP54-211ENST00000556445 BHLHE41Q9C0J9 482 aaPredicted RBP7.62□□□□□ -1.19
SRP54-211ENST00000556445 MRPL18Q9H0U6 180 aaKnown RBP7.62□□□□□ -1.19
SRP54-211ENST00000556445 KCNK4Q9NYG8 393 aa7.62□□□□□ -1.19
SRP54-211ENST00000556445 F8W735 103 aaPredicted RBP7.61□□□□□ -1.19
SRP54-211ENST00000556445 H3BRJ5 948 aa7.61□□□□□ -1.19
SRP54-211ENST00000556445 ORC1Q13415 861 aa7.61□□□□□ -1.19
SRP54-211ENST00000556445 GALNT12Q8IXK2 581 aa7.61□□□□□ -1.19
SRP54-211ENST00000556445 RBCK1Q9BYM8 510 aa7.61□□□□□ -1.19
SRP54-211ENST00000556445 ERICH3Q5RHP9 1530 aa7.61□□□□□ -1.19
SRP54-211ENST00000556445 RUSC2Q8N2Y8 1516 aa7.61□□□□□ -1.19
SRP54-211ENST00000556445 DNMBPQ6XZF7 1577 aa7.6□□□□□ -1.19
SRP54-211ENST00000556445 WISP1O95388 367 aa7.6□□□□□ -1.19
SRP54-211ENST00000556445 CD68P34810 354 aaPredicted RBP7.6□□□□□ -1.19
SRP54-211ENST00000556445 VN1R5Q7Z5H4 357 aa7.6□□□□□ -1.19
SRP54-211ENST00000556445 KLHL23Q8NBE8 558 aa7.6□□□□□ -1.19
SRP54-211ENST00000556445 MEGF10Q96KG7 1140 aa7.6□□□□□ -1.19
SRP54-211ENST00000556445 SEMA6BQ9H3T3 888 aa7.6□□□□□ -1.19
SRP54-211ENST00000556445 AKTIPQ9H8T0 292 aa7.6□□□□□ -1.19
SRP54-211ENST00000556445 A0A1W2PP55 124 aa7.59□□□□□ -1.19
SRP54-211ENST00000556445 DYRK3O43781 588 aa7.59□□□□□ -1.19
SRP54-211ENST00000556445 ADAM11O75078 769 aa7.59□□□□□ -1.19
SRP54-211ENST00000556445 ALX3O95076 343 aa7.59□□□□□ -1.19
SRP54-211ENST00000556445 PIP4K2BP78356 416 aa7.59□□□□□ -1.19
SRP54-211ENST00000556445 FAM117BQ6P1L5 589 aa7.59□□□□□ -1.19
SRP54-211ENST00000556445 Q6ZS46 218 aa7.59□□□□□ -1.19
SRP54-211ENST00000556445 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.59□□□□□ -1.19
SRP54-211ENST00000556445 BSNDQ8WZ55 320 aa7.59□□□□□ -1.19
SRP54-211ENST00000556445 WNT8BQ93098 351 aa7.59□□□□□ -1.19
SRP54-211ENST00000556445 KLHDC7BQ96G42 594 aa7.59□□□□□ -1.19
SRP54-211ENST00000556445 GZF1Q9H116 711 aaPredicted RBP7.59□□□□□ -1.19
SRP54-211ENST00000556445 SEC31BQ9NQW1 1179 aa7.59□□□□□ -1.19
SRP54-211ENST00000556445 CEP162Q5TB80 1403 aa7.59□□□□□ -1.19
SRP54-211ENST00000556445 FAM177BA6PVY3 158 aa7.58□□□□□ -1.2
SRP54-211ENST00000556445 NEFLP07196 543 aa7.58□□□□□ -1.2
SRP54-211ENST00000556445 CABP4P57796 275 aa7.58□□□□□ -1.2
SRP54-211ENST00000556445 KCNA1Q09470 495 aa7.58□□□□□ -1.2
SRP54-211ENST00000556445 HGSNATQ68CP4 663 aa7.58□□□□□ -1.2
SRP54-211ENST00000556445 DZIP1LQ8IYY4 767 aaKnown RBP7.58□□□□□ -1.2
SRP54-211ENST00000556445 AGGF1Q8N302 714 aaeCLIP7.58□□□□□ -1.2
SRP54-211ENST00000556445 TCF12Q99081 682 aa7.58□□□□□ -1.2
SRP54-211ENST00000556445 NIF3L1Q9GZT8 377 aa7.58□□□□□ -1.2
SRP54-211ENST00000556445 OSGEPQ9NPF4 335 aa7.58□□□□□ -1.2
SRP54-211ENST00000556445 BIN2Q9UBW5 565 aaPredicted RBP7.58□□□□□ -1.2
SRP54-211ENST00000556445 IVNS1ABPQ9Y6Y0 642 aa7.58□□□□□ -1.2
SRP54-211ENST00000556445 FGD5Q6ZNL6 1462 aa7.57□□□□□ -1.2
SRP54-211ENST00000556445 METTL12A8MUP2 240 aa7.57□□□□□ -1.2
SRP54-211ENST00000556445 DDX3YO15523 660 aaKnown RBP7.57□□□□□ -1.2
SRP54-211ENST00000556445 CPNE3O75131 537 aaKnown RBP7.57□□□□□ -1.2
SRP54-211ENST00000556445 H2AFB1P0C5Y9 115 aa7.57□□□□□ -1.2
SRP54-211ENST00000556445 H2AFB2P0C5Z0 115 aa7.57□□□□□ -1.2
SRP54-211ENST00000556445 TMC7Q7Z402 723 aa7.57□□□□□ -1.2
SRP54-211ENST00000556445 CCNJLQ8IV13 435 aa7.57□□□□□ -1.2
SRP54-211ENST00000556445 TP53INP1Q96A56 240 aa7.57□□□□□ -1.2
SRP54-211ENST00000556445 ALKBH8Q96BT7 664 aaKnown RBP7.57□□□□□ -1.2
SRP54-211ENST00000556445 DCTN4Q9UJW0 460 aa7.57□□□□□ -1.2
SRP54-211ENST00000556445 PRXQ9BXM0 1461 aa7.56□□□□□ -1.2
SRP54-211ENST00000556445 LOC100996750A0A140TA64 210 aa7.56□□□□□ -1.2
SRP54-211ENST00000556445 E9PSI1 815 aa7.56□□□□□ -1.2
SRP54-211ENST00000556445 SOX1O00570 391 aaPredicted RBP7.56□□□□□ -1.2
SRP54-211ENST00000556445 EIF1AYO14602 144 aaKnown RBP7.56□□□□□ -1.2
SRP54-211ENST00000556445 KIAA0319Q5VV43 1072 aa7.56□□□□□ -1.2
SRP54-211ENST00000556445 KIAA1211Q6ZU35 1233 aa7.56□□□□□ -1.2
SRP54-211ENST00000556445 TMC1Q8TDI8 760 aa7.56□□□□□ -1.2
SRP54-211ENST00000556445 ASAP3Q8TDY4 903 aa7.56□□□□□ -1.2
SRP54-211ENST00000556445 UBASH3BQ8TF42 649 aa7.56□□□□□ -1.2
SRP54-211ENST00000556445 DMRTB1Q96MA1 342 aa7.56□□□□□ -1.2
SRP54-211ENST00000556445 KRTAP4-6Q9BYQ5 205 aa7.56□□□□□ -1.2
SRP54-211ENST00000556445 TOPBP1Q92547 1522 aa7.56□□□□□ -1.2
SRP54-211ENST00000556445 NESP48681 1621 aa7.56□□□□□ -1.2
SRP54-211ENST00000556445 GRIA4P48058 902 aa7.55□□□□□ -1.2
SRP54-211ENST00000556445 IKBKEQ14164 716 aa7.55□□□□□ -1.2
SRP54-211ENST00000556445 ACAD11Q709F0 780 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms