RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 AFDNP55196 1824 aaKnown RBP9.38□□□□□ -0.91
ATXN3-236ENST00000556220 RNF123Q5XPI4 1314 aa9.38□□□□□ -0.91
ATXN3-236ENST00000556220 CA12O43570 354 aa9.38□□□□□ -0.91
ATXN3-236ENST00000556220 STARD3NLO95772 234 aa9.38□□□□□ -0.91
ATXN3-236ENST00000556220 CLK2P49760 499 aaKnown RBP9.38□□□□□ -0.91
ATXN3-236ENST00000556220 FKBP4Q02790 459 aaKnown RBP eCLIP9.38□□□□□ -0.91
ATXN3-236ENST00000556220 GRM1Q13255 1194 aa9.38□□□□□ -0.91
ATXN3-236ENST00000556220 NNTQ13423 1086 aa9.38□□□□□ -0.91
ATXN3-236ENST00000556220 CST9Q5W186 159 aa9.38□□□□□ -0.91
ATXN3-236ENST00000556220 SULT6B1Q6IMI4 303 aa9.38□□□□□ -0.91
ATXN3-236ENST00000556220 CNBD1Q8NA66 436 aa9.38□□□□□ -0.91
ATXN3-236ENST00000556220 HELBQ8NG08 1087 aaPredicted RBP9.38□□□□□ -0.91
ATXN3-236ENST00000556220 TSC1Q92574 1164 aa9.38□□□□□ -0.91
ATXN3-236ENST00000556220 FOXJ1Q92949 421 aa9.38□□□□□ -0.91
ATXN3-236ENST00000556220 SETDB2Q96T68 719 aa9.38□□□□□ -0.91
ATXN3-236ENST00000556220 DICER1Q9UPY3 1922 aaKnown RBP9.38□□□□□ -0.91
ATXN3-236ENST00000556220 FER1L6Q2WGJ9 1857 aa9.37□□□□□ -0.91
ATXN3-236ENST00000556220 RNMTO43148 476 aaKnown RBP9.37□□□□□ -0.91
ATXN3-236ENST00000556220 ADH1CP00326 375 aa9.37□□□□□ -0.91
ATXN3-236ENST00000556220 BMP1P13497 986 aa9.37□□□□□ -0.91
ATXN3-236ENST00000556220 ST5P78524 1137 aa9.37□□□□□ -0.91
ATXN3-236ENST00000556220 FMR1Q06787 632 aaKnown RBP eCLIP9.37□□□□□ -0.91
ATXN3-236ENST00000556220 DGKZQ13574 1117 aa9.37□□□□□ -0.91
ATXN3-236ENST00000556220 BPHLQ86WA6 291 aaPredicted RBP9.37□□□□□ -0.91
ATXN3-236ENST00000556220 RTKN2Q8IZC4 609 aa9.37□□□□□ -0.91
ATXN3-236ENST00000556220 GPC2Q8N158 579 aa9.37□□□□□ -0.91
ATXN3-236ENST00000556220 TBC1D2BQ9UPU7 963 aa9.37□□□□□ -0.91
ATXN3-236ENST00000556220 SCN4AP35499 1836 aa9.37□□□□□ -0.91
ATXN3-236ENST00000556220 DLEC1Q9Y238 1755 aa9.37□□□□□ -0.91
ATXN3-236ENST00000556220 NPHP1O15259 732 aa9.36□□□□□ -0.91
ATXN3-236ENST00000556220 WIPF1O43516 503 aa9.36□□□□□ -0.91
ATXN3-236ENST00000556220 AOC2O75106 756 aa9.36□□□□□ -0.91
ATXN3-236ENST00000556220 SYNE4Q8N205 404 aa9.36□□□□□ -0.91
ATXN3-236ENST00000556220 TJP1Q07157 1748 aa9.36□□□□□ -0.91
ATXN3-236ENST00000556220 TNRC18O15417 2968 aaPredicted RBP9.36□□□□□ -0.91
ATXN3-236ENST00000556220 KLRG2A4D1S0 409 aaPredicted RBP9.35□□□□□ -0.91
ATXN3-236ENST00000556220 NPR1P16066 1061 aa9.35□□□□□ -0.91
ATXN3-236ENST00000556220 IARSP41252 1262 aaKnown RBP9.35□□□□□ -0.91
ATXN3-236ENST00000556220 AGERQ15109 404 aa9.35□□□□□ -0.91
ATXN3-236ENST00000556220 RTL5Q5HYW3 569 aaPredicted RBP9.35□□□□□ -0.91
ATXN3-236ENST00000556220 KIF20BQ96Q89 1820 aa9.35□□□□□ -0.91
ATXN3-236ENST00000556220 SLX4Q8IY92 1834 aa9.34□□□□□ -0.91
ATXN3-236ENST00000556220 TRAF5O00463 557 aa9.34□□□□□ -0.91
ATXN3-236ENST00000556220 CAMTA2O94983 1202 aa9.34□□□□□ -0.91
ATXN3-236ENST00000556220 LMOD1P29536 600 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-236ENST00000556220 IL6STP40189 918 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-236ENST00000556220 EPS15P42566 896 aa9.34□□□□□ -0.91
ATXN3-236ENST00000556220 BRPF1P55201 1214 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-236ENST00000556220 WDR4P57081 412 aaKnown RBP9.34□□□□□ -0.91
ATXN3-236ENST00000556220 NR5A1Q13285 461 aa9.34□□□□□ -0.91
ATXN3-236ENST00000556220 OLFM4Q6UX06 510 aa9.34□□□□□ -0.91
ATXN3-236ENST00000556220 SAPCD2Q86UD0 394 aa9.34□□□□□ -0.91
ATXN3-236ENST00000556220 JDP2Q8WYK2 163 aa9.34□□□□□ -0.91
ATXN3-236ENST00000556220 KLF16Q9BXK1 252 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-236ENST00000556220 TEX13AQ9BXU3 409 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-236ENST00000556220 POLR3EQ9NVU0 708 aa9.34□□□□□ -0.91
ATXN3-236ENST00000556220 ZNF330Q9Y3S2 320 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-236ENST00000556220 ANKRD26Q9UPS8 1709 aa9.34□□□□□ -0.92
ATXN3-236ENST00000556220 TIMP2P16035 220 aa9.33□□□□□ -0.92
ATXN3-236ENST00000556220 IL13P35225 146 aa9.33□□□□□ -0.92
ATXN3-236ENST00000556220 EIF6P56537 245 aaKnown RBP9.33□□□□□ -0.92
ATXN3-236ENST00000556220 ARID5BQ14865 1188 aa9.33□□□□□ -0.92
ATXN3-236ENST00000556220 C4orf48Q5BLP8 95 aa9.33□□□□□ -0.92
ATXN3-236ENST00000556220 USP50Q70EL3 339 aaPredicted RBP9.33□□□□□ -0.92
ATXN3-236ENST00000556220 NPM2Q86SE8 214 aaKnown RBP9.33□□□□□ -0.92
ATXN3-236ENST00000556220 NPAS3Q8IXF0 933 aa9.33□□□□□ -0.92
ATXN3-236ENST00000556220 HHIPL1Q96JK4 782 aa9.33□□□□□ -0.92
ATXN3-236ENST00000556220 NXF1Q9UBU9 619 aaKnown RBP9.33□□□□□ -0.92
ATXN3-236ENST00000556220 GJA3Q9Y6H8 435 aa9.33□□□□□ -0.92
ATXN3-236ENST00000556220 ADAMTSL1Q8N6G6 1762 aa9.32□□□□□ -0.92
ATXN3-236ENST00000556220 CELF2O95319 508 aaKnown RBP9.32□□□□□ -0.92
ATXN3-236ENST00000556220 ALDH1B1P30837 517 aa9.32□□□□□ -0.92
ATXN3-236ENST00000556220 SCNN1DP51172 638 aa9.32□□□□□ -0.92
ATXN3-236ENST00000556220 SCARF1Q14162 830 aa9.32□□□□□ -0.92
ATXN3-236ENST00000556220 CIAPIN1Q6FI81 312 aa9.32□□□□□ -0.92
ATXN3-236ENST00000556220 MRPL14Q6P1L8 145 aaKnown RBP9.32□□□□□ -0.92
ATXN3-236ENST00000556220 CLEC4GQ6UXB4 293 aa9.32□□□□□ -0.92
ATXN3-236ENST00000556220 NBPF5PQ86XG9 351 aaPredicted RBP9.32□□□□□ -0.92
ATXN3-236ENST00000556220 TTC5Q8N0Z6 440 aa9.32□□□□□ -0.92
ATXN3-236ENST00000556220 ZNF496Q96IT1 587 aaPredicted RBP9.32□□□□□ -0.92
ATXN3-236ENST00000556220 ZFP42Q96MM3 310 aa9.32□□□□□ -0.92
ATXN3-236ENST00000556220 PSMD1Q99460 953 aa9.32□□□□□ -0.92
ATXN3-236ENST00000556220 CASP8AP2Q9UKL3 1982 aa9.32□□□□□ -0.92
ATXN3-236ENST00000556220 A1BGP04217 495 aa9.31□□□□□ -0.92
ATXN3-236ENST00000556220 GRM5P41594 1212 aa9.31□□□□□ -0.92
ATXN3-236ENST00000556220 SOX10P56693 466 aa9.31□□□□□ -0.92
ATXN3-236ENST00000556220 INSM1Q01101 510 aaPredicted RBP9.31□□□□□ -0.92
ATXN3-236ENST00000556220 TPTE2Q6XPS3 522 aa9.31□□□□□ -0.92
ATXN3-236ENST00000556220 SH3RF1Q7Z6J0 888 aa9.31□□□□□ -0.92
ATXN3-236ENST00000556220 GPKOWQ92917 476 aaPredicted RBP eCLIP9.31□□□□□ -0.92
ATXN3-236ENST00000556220 ANKRD31Q8N7Z5 1873 aa9.31□□□□□ -0.92
ATXN3-236ENST00000556220 SKIV2LQ15477 1246 aaKnown RBP9.3□□□□□ -0.92
ATXN3-236ENST00000556220 MTHFSDQ2M296 383 aaKnown RBP9.3□□□□□ -0.92
ATXN3-236ENST00000556220 ZNF790Q6PG37 636 aa9.3□□□□□ -0.92
ATXN3-236ENST00000556220 DZIP3Q86Y13 1208 aaKnown RBP9.3□□□□□ -0.92
ATXN3-236ENST00000556220 C1QTNF2Q9BXJ5 285 aa9.3□□□□□ -0.92
ATXN3-236ENST00000556220 MRC1P22897 1456 aa9.29□□□□□ -0.92
ATXN3-236ENST00000556220 HEG1Q9ULI3 1381 aa9.29□□□□□ -0.92
ATXN3-236ENST00000556220 NOGQ13253 232 aa9.29□□□□□ -0.92
ATXN3-236ENST00000556220 LCE2CQ5TA81 110 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms