RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 PRR5LQ6MZQ0 368 aa17.58■□□□□ 0.41
VPS33B-205ENST00000556096 OSBP2Q969R2 916 aa17.58■□□□□ 0.41
VPS33B-205ENST00000556096 MINPP1Q9UNW1 487 aa17.58■□□□□ 0.41
VPS33B-205ENST00000556096 CELF1Q92879 486 aaKnown RBP17.58■□□□□ 0.4
VPS33B-205ENST00000556096 M0R2C6 588 aa17.57■□□□□ 0.4
VPS33B-205ENST00000556096 SNAP23O00161 211 aa17.57■□□□□ 0.4
VPS33B-205ENST00000556096 HSPD1P10809 573 aaKnown RBP17.57■□□□□ 0.4
VPS33B-205ENST00000556096 MCM4P33991 863 aa17.57■□□□□ 0.4
VPS33B-205ENST00000556096 ADD2P35612 726 aa17.57■□□□□ 0.4
VPS33B-205ENST00000556096 ZGPATQ8N5A5 531 aaKnown RBP17.57■□□□□ 0.4
VPS33B-205ENST00000556096 SPATA5Q8NB90 893 aa17.57■□□□□ 0.4
VPS33B-205ENST00000556096 TNPO1Q92973 898 aaKnown RBP17.57■□□□□ 0.4
VPS33B-205ENST00000556096 UBE3CQ15386 1083 aa17.56■□□□□ 0.4
VPS33B-205ENST00000556096 WASHC4Q2M389 1173 aa17.56■□□□□ 0.4
VPS33B-205ENST00000556096 BLOC1S2Q6QNY1 142 aa17.56■□□□□ 0.4
VPS33B-205ENST00000556096 ZSCAN31Q96LW9 406 aaPredicted RBP17.56■□□□□ 0.4
VPS33B-205ENST00000556096 PIH1D3Q9NQM4 214 aaKnown RBP17.56■□□□□ 0.4
VPS33B-205ENST00000556096 MYH7P12883 1935 aa17.56■□□□□ 0.4
VPS33B-205ENST00000556096 A0A1B0GUL6 1792 aa17.56■□□□□ 0.4
VPS33B-205ENST00000556096 CYP21A2P08686 494 aa17.55■□□□□ 0.4
VPS33B-205ENST00000556096 CPA1P15085 419 aa17.55■□□□□ 0.4
VPS33B-205ENST00000556096 RASGRF1Q13972 1273 aa17.55■□□□□ 0.4
VPS33B-205ENST00000556096 CLEC17AQ6ZS10 378 aa17.55■□□□□ 0.4
VPS33B-205ENST00000556096 RPS6KB1P23443 525 aa17.55■□□□□ 0.4
VPS33B-205ENST00000556096 BCAMP50895 628 aa17.55■□□□□ 0.4
VPS33B-205ENST00000556096 ST5P78524 1137 aa17.55■□□□□ 0.4
VPS33B-205ENST00000556096 ANKRD1Q15327 319 aa17.55■□□□□ 0.4
VPS33B-205ENST00000556096 NOL8Q76FK4 1167 aaKnown RBP17.55■□□□□ 0.4
VPS33B-205ENST00000556096 ANKRD2Q9GZV1 360 aa17.55■□□□□ 0.4
VPS33B-205ENST00000556096 SH2B1Q9NRF2 756 aaPredicted RBP17.55■□□□□ 0.4
VPS33B-205ENST00000556096 TAF6LQ9Y6J9 622 aa17.55■□□□□ 0.4
VPS33B-205ENST00000556096 ZNF804BA4D1E1 1349 aa17.55■□□□□ 0.4
VPS33B-205ENST00000556096 SLC9C2Q5TAH2 1124 aa17.54■□□□□ 0.4
VPS33B-205ENST00000556096 CTNNA3Q9UI47 895 aa17.54■□□□□ 0.4
VPS33B-205ENST00000556096 GBP4Q96PP9 640 aa17.53■□□□□ 0.4
VPS33B-205ENST00000556096 NEK1Q96PY6 1258 aa17.53■□□□□ 0.4
VPS33B-205ENST00000556096 PUS7LQ9H0K6 701 aaKnown RBP17.53■□□□□ 0.4
VPS33B-205ENST00000556096 GNL3LQ9NVN8 582 aaKnown RBP17.53■□□□□ 0.4
VPS33B-205ENST00000556096 WWC3Q9ULE0 1092 aa17.53■□□□□ 0.4
VPS33B-205ENST00000556096 IDH1O75874 414 aaKnown RBP17.52■□□□□ 0.4
VPS33B-205ENST00000556096 HMGB1P09429 215 aaKnown RBP17.52■□□□□ 0.4
VPS33B-205ENST00000556096 PDE6AP16499 860 aa17.52■□□□□ 0.4
VPS33B-205ENST00000556096 COL11A2P13942 1736 aaPredicted RBP17.52■□□□□ 0.4
VPS33B-205ENST00000556096 TCRBV5S4A2TA0A5A2 114 aa17.52■□□□□ 0.39
VPS33B-205ENST00000556096 ZBTB22O15209 634 aa17.52■□□□□ 0.39
VPS33B-205ENST00000556096 MAP3K12Q12852 859 aa17.52■□□□□ 0.39
VPS33B-205ENST00000556096 CAVIN4Q5BKX8 364 aa17.52■□□□□ 0.39
VPS33B-205ENST00000556096 FHDC1Q9C0D6 1143 aaPredicted RBP17.52■□□□□ 0.39
VPS33B-205ENST00000556096 DOCK2Q92608 1830 aa17.52■□□□□ 0.39
VPS33B-205ENST00000556096 ZNF532Q9HCE3 1301 aa17.51■□□□□ 0.39
VPS33B-205ENST00000556096 FOXP2O15409 715 aa17.51■□□□□ 0.39
VPS33B-205ENST00000556096 GPAA1O43292 621 aa17.51■□□□□ 0.39
VPS33B-205ENST00000556096 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.51■□□□□ 0.39
VPS33B-205ENST00000556096 DDX11L8A8MPP1 907 aa17.5■□□□□ 0.39
VPS33B-205ENST00000556096 GRAPQ13588 217 aa17.5■□□□□ 0.39
VPS33B-205ENST00000556096 NLGN2Q8NFZ4 835 aa17.5■□□□□ 0.39
VPS33B-205ENST00000556096 GRAPLQ8TC17 118 aaPredicted RBP17.5■□□□□ 0.39
VPS33B-205ENST00000556096 SEMA3EO15041 775 aa17.5■□□□□ 0.39
VPS33B-205ENST00000556096 CRY2Q49AN0 593 aa17.5■□□□□ 0.39
VPS33B-205ENST00000556096 FBXO33Q7Z6M2 555 aa17.5■□□□□ 0.39
VPS33B-205ENST00000556096 FAM84BQ96KN1 310 aaPredicted RBP17.5■□□□□ 0.39
VPS33B-205ENST00000556096 C10orf71Q711Q0 1435 aa17.49■□□□□ 0.39
VPS33B-205ENST00000556096 PTMSP20962 102 aa17.49■□□□□ 0.39
VPS33B-205ENST00000556096 CHRNA5P30532 468 aa17.49■□□□□ 0.39
VPS33B-205ENST00000556096 GYG1P46976 350 aa17.49■□□□□ 0.39
VPS33B-205ENST00000556096 COL9A3Q14050 684 aaPredicted RBP17.49■□□□□ 0.39
VPS33B-205ENST00000556096 TOB2Q14106 344 aaPredicted RBP17.49■□□□□ 0.39
VPS33B-205ENST00000556096 STOX1Q6ZVD7 989 aa17.49■□□□□ 0.39
VPS33B-205ENST00000556096 CACNA1SQ13698 1873 aa17.49■□□□□ 0.39
VPS33B-205ENST00000556096 MYO5AQ9Y4I1 1855 aaKnown RBP17.49■□□□□ 0.39
VPS33B-205ENST00000556096 E7EWF7 191 aa17.48■□□□□ 0.39
VPS33B-205ENST00000556096 LARGE1O95461 756 aa17.48■□□□□ 0.39
VPS33B-205ENST00000556096 FGAP02671 866 aa17.48■□□□□ 0.39
VPS33B-205ENST00000556096 IMMTQ16891 758 aaKnown RBP17.48■□□□□ 0.39
VPS33B-205ENST00000556096 DHX32Q7L7V1 743 aaKnown RBP17.48■□□□□ 0.39
VPS33B-205ENST00000556096 LARP6Q9BRS8 491 aaKnown RBP17.48■□□□□ 0.39
VPS33B-205ENST00000556096 DENND2AQ9ULE3 1009 aa17.48■□□□□ 0.39
VPS33B-205ENST00000556096 TPCN1Q9ULQ1 816 aa17.48■□□□□ 0.39
VPS33B-205ENST00000556096 ZDHHC9Q9Y397 364 aa17.48■□□□□ 0.39
VPS33B-205ENST00000556096 PDS5AQ29RF7 1337 aaKnown RBP17.48■□□□□ 0.39
VPS33B-205ENST00000556096 KLRG2A4D1S0 409 aaPredicted RBP17.47■□□□□ 0.39
VPS33B-205ENST00000556096 PKP1Q13835 747 aa17.47■□□□□ 0.39
VPS33B-205ENST00000556096 ME3Q16798 604 aa17.47■□□□□ 0.39
VPS33B-205ENST00000556096 VPS37DQ86XT2 251 aa17.47■□□□□ 0.39
VPS33B-205ENST00000556096 MAGEB6Q8N7X4 407 aa17.47■□□□□ 0.39
VPS33B-205ENST00000556096 A0A0G2JLW4 131 aa17.47■□□□□ 0.39
VPS33B-205ENST00000556096 WTIPA6NIX2 430 aaPredicted RBP17.47■□□□□ 0.39
VPS33B-205ENST00000556096 BRD1O95696 1058 aa17.47■□□□□ 0.39
VPS33B-205ENST00000556096 EXOSC10Q01780 885 aaKnown RBP17.47■□□□□ 0.39
VPS33B-205ENST00000556096 ALX1Q15699 326 aa17.47■□□□□ 0.39
VPS33B-205ENST00000556096 STRBPQ96SI9 672 aaKnown RBP17.47■□□□□ 0.39
VPS33B-205ENST00000556096 BRIP1Q9BX63 1249 aa17.47■□□□□ 0.39
VPS33B-205ENST00000556096 BAG4O95429 457 aaKnown RBP17.46■□□□□ 0.39
VPS33B-205ENST00000556096 TTLL5Q6EMB2 1281 aa17.46■□□□□ 0.39
VPS33B-205ENST00000556096 RPGRQ92834 1020 aaKnown RBP17.46■□□□□ 0.39
VPS33B-205ENST00000556096 AIDAQ96BJ3 306 aa17.46■□□□□ 0.39
VPS33B-205ENST00000556096 LRP2BPQ9P2M1 347 aa17.46■□□□□ 0.39
VPS33B-205ENST00000556096 LEMD3Q9Y2U8 911 aa17.46■□□□□ 0.39
VPS33B-205ENST00000556096 DPEP1P16444 411 aa17.45■□□□□ 0.38
VPS33B-205ENST00000556096 HOXA10P31260 410 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms