RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 GRIN2AQ12879 1464 aa5.71□□□□□ -1.49
EFCAB11-210ENST00000556078 DDX3YO15523 660 aaKnown RBP5.71□□□□□ -1.5
EFCAB11-210ENST00000556078 F13BP05160 661 aa5.71□□□□□ -1.5
EFCAB11-210ENST00000556078 ATP11AP98196 1134 aa5.71□□□□□ -1.5
EFCAB11-210ENST00000556078 HYAL2Q12891 473 aa5.71□□□□□ -1.5
EFCAB11-210ENST00000556078 CEP135Q66GS9 1140 aa5.71□□□□□ -1.5
EFCAB11-210ENST00000556078 LILRA6Q6PI73 481 aa5.71□□□□□ -1.5
EFCAB11-210ENST00000556078 LARP1Q6PKG0 1096 aaKnown RBP5.71□□□□□ -1.5
EFCAB11-210ENST00000556078 WNT8BQ93098 351 aa5.71□□□□□ -1.5
EFCAB11-210ENST00000556078 SEC31BQ9NQW1 1179 aa5.71□□□□□ -1.5
EFCAB11-210ENST00000556078 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.71□□□□□ -1.57e-8■■■■■ 186.3
EFCAB11-210ENST00000556078 CUL7Q14999 1698 aa5.71□□□□□ -1.5
EFCAB11-210ENST00000556078 GLI2P10070 1586 aa5.71□□□□□ -1.5
EFCAB11-210ENST00000556078 BCORL1Q5H9F3 1711 aa5.71□□□□□ -1.5
EFCAB11-210ENST00000556078 B8ZZF3 427 aa5.7□□□□□ -1.5
EFCAB11-210ENST00000556078 MAP4P27816 1152 aaKnown RBP5.7□□□□□ -1.5
EFCAB11-210ENST00000556078 PTK7Q13308 1070 aa5.7□□□□□ -1.5
EFCAB11-210ENST00000556078 TPRNQ4KMQ1 711 aa5.7□□□□□ -1.5
EFCAB11-210ENST00000556078 COL13A1Q5TAT6 717 aaPredicted RBP5.7□□□□□ -1.5
EFCAB11-210ENST00000556078 AGBL5Q8NDL9 886 aa5.7□□□□□ -1.5
EFCAB11-210ENST00000556078 COL26A1Q96A83 441 aa5.7□□□□□ -1.5
EFCAB11-210ENST00000556078 KLHDC7BQ96G42 594 aa5.7□□□□□ -1.5
EFCAB11-210ENST00000556078 SPACA7Q96KW9 195 aa5.7□□□□□ -1.5
EFCAB11-210ENST00000556078 OSBPL1AQ9BXW6 950 aa5.7□□□□□ -1.5
EFCAB11-210ENST00000556078 BSDC1Q9NW68 430 aaPredicted RBP5.7□□□□□ -1.5
EFCAB11-210ENST00000556078 LRFN2Q9ULH4 789 aa5.7□□□□□ -1.5
EFCAB11-210ENST00000556078 PRG4Q92954 1404 aaPredicted RBP5.7□□□□□ -1.5
EFCAB11-210ENST00000556078 SETD1AO15047 1707 aaKnown RBP5.7□□□□□ -1.5
EFCAB11-210ENST00000556078 FGD5Q6ZNL6 1462 aa5.7□□□□□ -1.5
EFCAB11-210ENST00000556078 ABCA5Q8WWZ7 1642 aa5.7□□□□□ -1.5
EFCAB11-210ENST00000556078 MEGF11A6BM72 1044 aa5.69□□□□□ -1.5
EFCAB11-210ENST00000556078 LGR5O75473 907 aa5.69□□□□□ -1.5
EFCAB11-210ENST00000556078 FARP2O94887 1054 aaPredicted RBP5.69□□□□□ -1.5
EFCAB11-210ENST00000556078 EPHA1P21709 976 aa5.69□□□□□ -1.5
EFCAB11-210ENST00000556078 DPYDQ12882 1025 aa5.69□□□□□ -1.5
EFCAB11-210ENST00000556078 ADAMTSL4Q6UY14 1074 aa5.69□□□□□ -1.5
EFCAB11-210ENST00000556078 VTI1AQ96AJ9 217 aa5.69□□□□□ -1.5
EFCAB11-210ENST00000556078 METTL22Q9BUU2 404 aaPredicted RBP5.69□□□□□ -1.5
EFCAB11-210ENST00000556078 ADAM19Q9H013 955 aa5.69□□□□□ -1.5
EFCAB11-210ENST00000556078 OSGEPQ9NPF4 335 aa5.69□□□□□ -1.5
EFCAB11-210ENST00000556078 LTBP4Q8N2S1 1624 aa5.69□□□□□ -1.5
EFCAB11-210ENST00000556078 ADAMTS12P58397 1594 aa5.68□□□□□ -1.5
EFCAB11-210ENST00000556078 KIF4AO95239 1232 aa5.68□□□□□ -1.5
EFCAB11-210ENST00000556078 PTPRAP18433 802 aa5.68□□□□□ -1.5
EFCAB11-210ENST00000556078 CDC25BP30305 580 aa5.68□□□□□ -1.5
EFCAB11-210ENST00000556078 BUD31P41223 144 aaPredicted RBP5.68□□□□□ -1.5
EFCAB11-210ENST00000556078 PIP4K2BP78356 416 aa5.68□□□□□ -1.5
EFCAB11-210ENST00000556078 TRIP4Q15650 581 aaPredicted RBP5.68□□□□□ -1.5
EFCAB11-210ENST00000556078 CRTC2Q53ET0 693 aaPredicted RBP5.68□□□□□ -1.5
EFCAB11-210ENST00000556078 FDX2Q6P4F2 183 aa5.68□□□□□ -1.5
EFCAB11-210ENST00000556078 KSR1Q8IVT5 923 aa5.68□□□□□ -1.5
EFCAB11-210ENST00000556078 POM121Q96HA1 1249 aa5.68□□□□□ -1.5
EFCAB11-210ENST00000556078 PBX4Q9BYU1 374 aa5.68□□□□□ -1.5
EFCAB11-210ENST00000556078 RASSF4Q9H2L5 321 aa5.68□□□□□ -1.5
EFCAB11-210ENST00000556078 GAS2O43903 313 aaKnown RBP5.67□□□□□ -1.5
EFCAB11-210ENST00000556078 PAPLNO95428 1278 aa5.67□□□□□ -1.5
EFCAB11-210ENST00000556078 ANKMY2Q8IV38 441 aa5.67□□□□□ -1.5
EFCAB11-210ENST00000556078 FBXL6Q8N531 539 aa5.67□□□□□ -1.5
EFCAB11-210ENST00000556078 RUSC1Q9BVN2 902 aa5.67□□□□□ -1.5
EFCAB11-210ENST00000556078 KRTAP9-3Q9BYQ3 159 aa5.67□□□□□ -1.5
EFCAB11-210ENST00000556078 PAK6Q9NQU5 681 aaPredicted RBP5.67□□□□□ -1.5
EFCAB11-210ENST00000556078 SH2B1Q9NRF2 756 aaPredicted RBP5.67□□□□□ -1.5
EFCAB11-210ENST00000556078 MAFBQ9Y5Q3 323 aaPredicted RBP5.67□□□□□ -1.5
EFCAB11-210ENST00000556078 TOP2AP11388 1531 aaKnown RBP5.67□□□□□ -1.5
EFCAB11-210ENST00000556078 SIGLEC1Q9BZZ2 1709 aa5.66□□□□□ -1.5
EFCAB11-210ENST00000556078 H3BRJ5 948 aa5.66□□□□□ -1.5
EFCAB11-210ENST00000556078 RAD21O60216 631 aa5.66□□□□□ -1.5
EFCAB11-210ENST00000556078 SGO2Q562F6 1265 aa5.66□□□□□ -1.5
EFCAB11-210ENST00000556078 TFIP11Q9UBB9 837 aaKnown RBP5.66□□□□□ -1.5
EFCAB11-210ENST00000556078 ABCC2Q92887 1545 aa5.65□□□□□ -1.5
EFCAB11-210ENST00000556078 FAM196BA6NMK8 535 aa5.65□□□□□ -1.5
EFCAB11-210ENST00000556078 FAM177BA6PVY3 158 aa5.65□□□□□ -1.5
EFCAB11-210ENST00000556078 CYP26A1O43174 497 aa5.65□□□□□ -1.5
EFCAB11-210ENST00000556078 KRTAP19-4Q3LI73 84 aa5.65□□□□□ -1.5
EFCAB11-210ENST00000556078 COX20Q5RI15 118 aa5.65□□□□□ -1.5
EFCAB11-210ENST00000556078 KANK4Q5T7N3 995 aaPredicted RBP5.65□□□□□ -1.5
EFCAB11-210ENST00000556078 ETFBKMTQ8IXQ9 262 aa5.65□□□□□ -1.5
EFCAB11-210ENST00000556078 CEP120Q8N960 986 aa5.65□□□□□ -1.5
EFCAB11-210ENST00000556078 FLCNQ8NFG4 579 aa5.65□□□□□ -1.5
EFCAB11-210ENST00000556078 ASXL2Q76L83 1435 aa5.65□□□□□ -1.51
EFCAB11-210ENST00000556078 FAM95CA0A1B0GW59 222 aa5.64□□□□□ -1.51
EFCAB11-210ENST00000556078 UBAP1LF5GYI3 381 aa5.64□□□□□ -1.51
EFCAB11-210ENST00000556078 SCNN1AP37088 669 aa5.64□□□□□ -1.51
EFCAB11-210ENST00000556078 CABP4P57796 275 aa5.64□□□□□ -1.51
EFCAB11-210ENST00000556078 TMEM132AQ24JP5 1023 aa5.64□□□□□ -1.51
EFCAB11-210ENST00000556078 TTC39BQ5VTQ0 682 aaPredicted RBP5.64□□□□□ -1.51
EFCAB11-210ENST00000556078 SMG8Q8ND04 991 aaKnown RBP5.64□□□□□ -1.51
EFCAB11-210ENST00000556078 POP1Q99575 1024 aaKnown RBP5.64□□□□□ -1.51
EFCAB11-210ENST00000556078 ZMYND15Q9H091 742 aa5.64□□□□□ -1.51
EFCAB11-210ENST00000556078 SUGCTQ9HAC7 445 aa5.64□□□□□ -1.51
EFCAB11-210ENST00000556078 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.64□□□□□ -1.51
EFCAB11-210ENST00000556078 CCDC88BA6NC98 1476 aa5.64□□□□□ -1.51
EFCAB11-210ENST00000556078 USP17L15C9J2P7 530 aa5.63□□□□□ -1.51
EFCAB11-210ENST00000556078 USP17L10C9JJH3 530 aa5.63□□□□□ -1.51
EFCAB11-210ENST00000556078 USP17L13C9JLJ4 530 aa5.63□□□□□ -1.51
EFCAB11-210ENST00000556078 USP17L12C9JPN9 530 aa5.63□□□□□ -1.51
EFCAB11-210ENST00000556078 USP17L11C9JVI0 530 aa5.63□□□□□ -1.51
EFCAB11-210ENST00000556078 USP17L21D6R901 530 aa5.63□□□□□ -1.51
EFCAB11-210ENST00000556078 USP17L18D6R9N7 530 aa5.63□□□□□ -1.51
EFCAB11-210ENST00000556078 USP17L22D6RA61 530 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms