RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 TBC1D8O95759 1140 aa12□□□□□ -0.49
PRKCH-218ENST00000555628 TM4SF4P48230 202 aa12□□□□□ -0.49
PRKCH-218ENST00000555628 HSP90AB3PQ58FF7 597 aa12□□□□□ -0.49
PRKCH-218ENST00000555628 PPP4R3BQ5MIZ7 849 aa12□□□□□ -0.49
PRKCH-218ENST00000555628 RBM26Q5T8P6 1007 aaKnown RBP12□□□□□ -0.49
PRKCH-218ENST00000555628 ANGEL2Q5VTE6 544 aaKnown RBP12□□□□□ -0.49
PRKCH-218ENST00000555628 FBXO46Q6PJ61 603 aaPredicted RBP12□□□□□ -0.49
PRKCH-218ENST00000555628 COPS6Q7L5N1 327 aa12□□□□□ -0.49
PRKCH-218ENST00000555628 XAGE3Q8WTP9 111 aa12□□□□□ -0.49
PRKCH-218ENST00000555628 GCC1Q96CN9 775 aa12□□□□□ -0.49
PRKCH-218ENST00000555628 PCGF6Q9BYE7 350 aa12□□□□□ -0.49
PRKCH-218ENST00000555628 R3HDMLQ9H3Y0 253 aa12□□□□□ -0.49
PRKCH-218ENST00000555628 PODXL2Q9NZ53 605 aa12□□□□□ -0.49
PRKCH-218ENST00000555628 TRMT112Q9UI30 125 aaKnown RBP12□□□□□ -0.49
PRKCH-218ENST00000555628 A0A0C4DFX4 3053 aa12□□□□□ -0.49
PRKCH-218ENST00000555628 GPR25O00155 361 aa11.99□□□□□ -0.49
PRKCH-218ENST00000555628 PSEN2P49810 448 aa11.99□□□□□ -0.49
PRKCH-218ENST00000555628 ISCA1Q9BUE6 129 aa11.99□□□□□ -0.49
PRKCH-218ENST00000555628 NSFL1CQ9UNZ2 370 aaKnown RBP11.99□□□□□ -0.49
PRKCH-218ENST00000555628 COL6A3P12111 3177 aa11.99□□□□□ -0.49
PRKCH-218ENST00000555628 LAMA3Q16787 3333 aa11.99□□□□□ -0.49
PRKCH-218ENST00000555628 TRIOBPQ9H2D6 2365 aa11.98□□□□□ -0.49
PRKCH-218ENST00000555628 FXR1P51114 621 aaKnown RBP eCLIP11.98□□□□□ -0.49
PRKCH-218ENST00000555628 SCARF1Q14162 830 aa11.98□□□□□ -0.49
PRKCH-218ENST00000555628 RSBN1LQ6PCB5 846 aaPredicted RBP11.98□□□□□ -0.49
PRKCH-218ENST00000555628 ANKRD13DQ6ZTN6 518 aa11.98□□□□□ -0.49
PRKCH-218ENST00000555628 AGBL3Q8NEM8 1001 aa11.98□□□□□ -0.49
PRKCH-218ENST00000555628 NECTIN2Q92692 538 aa11.98□□□□□ -0.49
PRKCH-218ENST00000555628 BABAM1Q9NWV8 329 aa11.97□□□□□ -0.49
PRKCH-218ENST00000555628 TSPYL4Q9UJ04 414 aa11.97□□□□□ -0.49
PRKCH-218ENST00000555628 PCDHGA10Q9Y5H3 936 aa11.97□□□□□ -0.49
PRKCH-218ENST00000555628 UBE2Q2LH0YL09 131 aa11.96□□□□□ -0.49
PRKCH-218ENST00000555628 C6orf229H3BNL8 230 aa11.96□□□□□ -0.49
PRKCH-218ENST00000555628 ARHGAP33O14559 1287 aa11.96□□□□□ -0.49
PRKCH-218ENST00000555628 EIF2S2P20042 333 aaKnown RBP11.96□□□□□ -0.49
PRKCH-218ENST00000555628 DMRTA1Q5VZB9 504 aa11.96□□□□□ -0.49
PRKCH-218ENST00000555628 ZNF428Q96B54 188 aa11.96□□□□□ -0.49
PRKCH-218ENST00000555628 FAM89AQ96GI7 184 aa11.96□□□□□ -0.49
PRKCH-218ENST00000555628 EYA3Q99504 573 aa11.96□□□□□ -0.49
PRKCH-218ENST00000555628 MYOZ2Q9NPC6 264 aa11.96□□□□□ -0.49
PRKCH-218ENST00000555628 HDAC9Q9UKV0 1011 aa11.96□□□□□ -0.49
PRKCH-218ENST00000555628 SCAF8Q9UPN6 1271 aaKnown RBP11.96□□□□□ -0.49
PRKCH-218ENST00000555628 RPS8P62241 208 aaKnown RBP11.95□□□□□ -0.5
PRKCH-218ENST00000555628 LSM11P83369 360 aaKnown RBP eCLIP11.95□□□□□ -0.5
PRKCH-218ENST00000555628 TRIM28Q13263 835 aaKnown RBP11.95□□□□□ -0.5
PRKCH-218ENST00000555628 KRT24Q2M2I5 525 aa11.95□□□□□ -0.5
PRKCH-218ENST00000555628 SSC5DA1L4H1 1573 aa11.95□□□□□ -0.5
PRKCH-218ENST00000555628 CAP1Q01518 475 aa11.94□□□□□ -0.5
PRKCH-218ENST00000555628 AIMP1Q12904 312 aaKnown RBP11.94□□□□□ -0.5
PRKCH-218ENST00000555628 NBPF9Q3BBW0 867 aa11.94□□□□□ -0.5
PRKCH-218ENST00000555628 LDLRAD1Q5T700 205 aa11.94□□□□□ -0.5
PRKCH-218ENST00000555628 PRAMEF18Q5VWM3 479 aa11.94□□□□□ -0.5
PRKCH-218ENST00000555628 PLBD2Q8NHP8 589 aa11.94□□□□□ -0.5
PRKCH-218ENST00000555628 DDX12PQ92771 950 aa11.94□□□□□ -0.5
PRKCH-218ENST00000555628 ADAM33Q9BZ11 813 aa11.94□□□□□ -0.5
PRKCH-218ENST00000555628 SEC31BQ9NQW1 1179 aa11.94□□□□□ -0.5
PRKCH-218ENST00000555628 ARIH1Q9Y4X5 557 aaPredicted RBP11.94□□□□□ -0.5
PRKCH-218ENST00000555628 FKTNO75072 461 aa11.93□□□□□ -0.5
PRKCH-218ENST00000555628 UFL1O94874 794 aa11.93□□□□□ -0.5
PRKCH-218ENST00000555628 USP17L8P0C7I0 530 aa11.93□□□□□ -0.5
PRKCH-218ENST00000555628 PBX2P40425 430 aa11.93□□□□□ -0.5
PRKCH-218ENST00000555628 MMRN1Q13201 1228 aa11.93□□□□□ -0.5
PRKCH-218ENST00000555628 OTOP1Q7RTM1 612 aa11.93□□□□□ -0.5
PRKCH-218ENST00000555628 CHPF2Q9P2E5 772 aa11.93□□□□□ -0.5
PRKCH-218ENST00000555628 CUL9Q8IWT3 2517 aa11.92□□□□□ -0.5
PRKCH-218ENST00000555628 WTIPA6NIX2 430 aaPredicted RBP11.92□□□□□ -0.5
PRKCH-218ENST00000555628 ATP5J2-PTCD1G3V325 749 aa11.92□□□□□ -0.5
PRKCH-218ENST00000555628 PTPN12Q05209 780 aaKnown RBP11.92□□□□□ -0.5
PRKCH-218ENST00000555628 KCNV2Q8TDN2 545 aa11.92□□□□□ -0.5
PRKCH-218ENST00000555628 ZDHHC16Q969W1 377 aa11.92□□□□□ -0.5
PRKCH-218ENST00000555628 ARMC5Q96C12 935 aa11.92□□□□□ -0.5
PRKCH-218ENST00000555628 ZBED3Q96IU2 234 aaPredicted RBP11.92□□□□□ -0.5
PRKCH-218ENST00000555628 KCNK17Q96T54 332 aa11.92□□□□□ -0.5
PRKCH-218ENST00000555628 ZC3H12CQ9C0D7 883 aaKnown RBP11.92□□□□□ -0.5
PRKCH-218ENST00000555628 CHL1O00533 1208 aa11.91□□□□□ -0.5
PRKCH-218ENST00000555628 WNT10BO00744 389 aa11.91□□□□□ -0.5
PRKCH-218ENST00000555628 IRS4O14654 1257 aaPredicted RBP11.91□□□□□ -0.5
PRKCH-218ENST00000555628 SREBF2Q12772 1141 aa11.91□□□□□ -0.5
PRKCH-218ENST00000555628 DACT2Q5SW24 774 aa11.91□□□□□ -0.5
PRKCH-218ENST00000555628 SPRYD7Q5W111 196 aa11.91□□□□□ -0.5
PRKCH-218ENST00000555628 GGA1Q9UJY5 639 aa11.91□□□□□ -0.5
PRKCH-218ENST00000555628 COL1A1P02452 1464 aaPredicted RBP11.9□□□□□ -0.5
PRKCH-218ENST00000555628 USP17L3A6NCW0 530 aa11.9□□□□□ -0.5
PRKCH-218ENST00000555628 USP17L4A6NCW7 530 aa11.9□□□□□ -0.5
PRKCH-218ENST00000555628 IGF2BP3O00425 579 aaKnown RBP eCLIP11.9□□□□□ -0.5
PRKCH-218ENST00000555628 HOXB7P09629 217 aa11.9□□□□□ -0.5
PRKCH-218ENST00000555628 USP17L1Q7RTZ2 530 aa11.9□□□□□ -0.5
PRKCH-218ENST00000555628 MXD3Q9BW11 206 aa11.9□□□□□ -0.5
PRKCH-218ENST00000555628 OTOFQ9HC10 1997 aa11.9□□□□□ -0.5
PRKCH-218ENST00000555628 ECM29Q5VYK3 1845 aa11.9□□□□□ -0.5
PRKCH-218ENST00000555628 SPEF2Q9C093 1822 aa11.9□□□□□ -0.5
PRKCH-218ENST00000555628 MED23Q9ULK4 1368 aa11.9□□□□□ -0.5
PRKCH-218ENST00000555628 XDHP47989 1333 aa11.89□□□□□ -0.51
PRKCH-218ENST00000555628 SPDYE16A6NNV3 312 aaPredicted RBP11.89□□□□□ -0.51
PRKCH-218ENST00000555628 MAP3K11Q16584 847 aa11.89□□□□□ -0.51
PRKCH-218ENST00000555628 RTL5Q5HYW3 569 aaPredicted RBP11.89□□□□□ -0.51
PRKCH-218ENST00000555628 INTS3Q68E01 1043 aaKnown RBP11.89□□□□□ -0.51
PRKCH-218ENST00000555628 PODNQ7Z5L7 613 aa11.89□□□□□ -0.51
PRKCH-218ENST00000555628 ZBTB38Q8NAP3 1195 aaPredicted RBP11.89□□□□□ -0.51
PRKCH-218ENST00000555628 MAPK8IP3Q9UPT6 1336 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms