RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 KIF13BQ9NQT8 1826 aa12.33□□□□□ -0.44
SRP54-208ENST00000555557 DUOX1Q9NRD9 1551 aa12.33□□□□□ -0.44
SRP54-208ENST00000555557 MED23Q9ULK4 1368 aa12.33□□□□□ -0.44
SRP54-208ENST00000555557 HIP1O00291 1037 aa12.33□□□□□ -0.44
SRP54-208ENST00000555557 RNF113AO15541 343 aaKnown RBP12.33□□□□□ -0.44
SRP54-208ENST00000555557 DALRD3Q5D0E6 543 aaKnown RBP12.33□□□□□ -0.44
SRP54-208ENST00000555557 UPF2Q9HAU5 1272 aaKnown RBP12.33□□□□□ -0.44
SRP54-208ENST00000555557 SLC9C2Q5TAH2 1124 aa12.32□□□□□ -0.44
SRP54-208ENST00000555557 CCDC129Q6ZRS4 1044 aa12.32□□□□□ -0.44
SRP54-208ENST00000555557 ZNF589Q86UQ0 364 aaPredicted RBP12.32□□□□□ -0.44
SRP54-208ENST00000555557 ANO2Q9NQ90 1003 aa12.32□□□□□ -0.44
SRP54-208ENST00000555557 LRP2BPQ9P2M1 347 aa12.32□□□□□ -0.44
SRP54-208ENST00000555557 LTBP1Q14766 1721 aa12.32□□□□□ -0.44
SRP54-208ENST00000555557 AK9Q5TCS8 1911 aa12.31□□□□□ -0.44
SRP54-208ENST00000555557 SEMA3EO15041 775 aa12.31□□□□□ -0.44
SRP54-208ENST00000555557 IL1R1P14778 569 aa12.31□□□□□ -0.44
SRP54-208ENST00000555557 CCDC93Q567U6 631 aa12.31□□□□□ -0.44
SRP54-208ENST00000555557 CC2D2BQ6DHV5 1058 aa12.31□□□□□ -0.44
SRP54-208ENST00000555557 RUFY2Q8WXA3 655 aa12.31□□□□□ -0.44
SRP54-208ENST00000555557 USP26Q9BXU7 913 aa12.31□□□□□ -0.44
SRP54-208ENST00000555557 RTFDC1Q9BY42 306 aaPredicted RBP12.31□□□□□ -0.44
SRP54-208ENST00000555557 C22orf23Q9BZE7 217 aa12.31□□□□□ -0.44
SRP54-208ENST00000555557 FHDC1Q9C0D6 1143 aaPredicted RBP12.31□□□□□ -0.44
SRP54-208ENST00000555557 DBNDD1Q9H9R9 158 aa12.31□□□□□ -0.44
SRP54-208ENST00000555557 BCS1LQ9Y276 419 aa12.31□□□□□ -0.44
SRP54-208ENST00000555557 SNED1Q8TER0 1413 aa12.31□□□□□ -0.44
SRP54-208ENST00000555557 REC8O95072 547 aa12.31□□□□□ -0.44
SRP54-208ENST00000555557 AOC3Q16853 763 aa12.31□□□□□ -0.44
SRP54-208ENST00000555557 ZMYM1Q5SVZ6 1142 aa12.31□□□□□ -0.44
SRP54-208ENST00000555557 OSBP2Q969R2 916 aa12.31□□□□□ -0.44
SRP54-208ENST00000555557 EYA3Q99504 573 aa12.31□□□□□ -0.44
SRP54-208ENST00000555557 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.31□□□□□ -0.442e-6■■■□□ 16
SRP54-208ENST00000555557 KIAA1551Q9HCM1 1747 aa12.3□□□□□ -0.44
SRP54-208ENST00000555557 ZNF532Q9HCE3 1301 aa12.3□□□□□ -0.44
SRP54-208ENST00000555557 G3V3G9 751 aa12.3□□□□□ -0.44
SRP54-208ENST00000555557 PDE6AP16499 860 aa12.3□□□□□ -0.44
SRP54-208ENST00000555557 ADD2P35612 726 aa12.3□□□□□ -0.44
SRP54-208ENST00000555557 MAP3K12Q12852 859 aa12.3□□□□□ -0.44
SRP54-208ENST00000555557 MCMDC2Q4G0Z9 681 aa12.3□□□□□ -0.44
SRP54-208ENST00000555557 DCAF8Q5TAQ9 597 aa12.3□□□□□ -0.44
SRP54-208ENST00000555557 RTKN2Q8IZC4 609 aa12.3□□□□□ -0.44
SRP54-208ENST00000555557 MAGEB6Q8N7X4 407 aa12.3□□□□□ -0.44
SRP54-208ENST00000555557 TBC1D32Q96NH3 1257 aa12.3□□□□□ -0.44
SRP54-208ENST00000555557 COA1Q9GZY4 146 aa12.3□□□□□ -0.44
SRP54-208ENST00000555557 PUS7LQ9H0K6 701 aaKnown RBP12.3□□□□□ -0.44
SRP54-208ENST00000555557 KCNQ5Q9NR82 932 aa12.3□□□□□ -0.44
SRP54-208ENST00000555557 RAI14Q9P0K7 980 aa12.3□□□□□ -0.44
SRP54-208ENST00000555557 RFX7Q2KHR2 1363 aa12.3□□□□□ -0.44
SRP54-208ENST00000555557 DLEC1Q9Y238 1755 aa12.29□□□□□ -0.44
SRP54-208ENST00000555557 M0R2C6 588 aa12.29□□□□□ -0.44
SRP54-208ENST00000555557 PRDX5P30044 214 aa12.29□□□□□ -0.44
SRP54-208ENST00000555557 GTF2IP78347 998 aa12.29□□□□□ -0.44
SRP54-208ENST00000555557 PTH1RQ03431 593 aa12.29□□□□□ -0.44
SRP54-208ENST00000555557 GRIK5Q16478 980 aa12.29□□□□□ -0.44
SRP54-208ENST00000555557 LSG1Q9H089 658 aaKnown RBP12.29□□□□□ -0.44
SRP54-208ENST00000555557 ZNF277Q9NRM2 450 aaPredicted RBP12.29□□□□□ -0.44
SRP54-208ENST00000555557 TCRBV5S4A2TA0A5A2 114 aa12.29□□□□□ -0.44
SRP54-208ENST00000555557 ZFYP08048 801 aaPredicted RBP12.29□□□□□ -0.44
SRP54-208ENST00000555557 LRRFIP1Q32MZ4 808 aaKnown RBP12.29□□□□□ -0.44
SRP54-208ENST00000555557 ZSCAN25Q6NSZ9 544 aa12.29□□□□□ -0.44
SRP54-208ENST00000555557 KIAA1211Q6ZU35 1233 aa12.29□□□□□ -0.44
SRP54-208ENST00000555557 FBXW7Q969H0 707 aa12.29□□□□□ -0.44
SRP54-208ENST00000555557 HELLSQ9NRZ9 838 aa12.29□□□□□ -0.44
SRP54-208ENST00000555557 MAST3O60307 1309 aa12.28□□□□□ -0.44
SRP54-208ENST00000555557 PDS5AQ29RF7 1337 aaKnown RBP12.28□□□□□ -0.44
SRP54-208ENST00000555557 PPIP5K2O43314 1243 aa12.28□□□□□ -0.44
SRP54-208ENST00000555557 KIAA2012Q0VF49 1180 aa12.28□□□□□ -0.44
SRP54-208ENST00000555557 UBE3CQ15386 1083 aa12.28□□□□□ -0.44
SRP54-208ENST00000555557 ERICH6Q7L0X2 663 aa12.28□□□□□ -0.44
SRP54-208ENST00000555557 WDR66Q8TBY9 1149 aa12.28□□□□□ -0.44
SRP54-208ENST00000555557 ZNF384Q8TF68 577 aa12.28□□□□□ -0.44
SRP54-208ENST00000555557 APPBP2Q92624 585 aa12.28□□□□□ -0.44
SRP54-208ENST00000555557 RAD50Q92878 1312 aa12.28□□□□□ -0.44
SRP54-208ENST00000555557 ECE2O60344 883 aa12.27□□□□□ -0.44
SRP54-208ENST00000555557 VPS53Q5VIR6 699 aa12.27□□□□□ -0.44
SRP54-208ENST00000555557 ADGRA1Q86SQ6 560 aa12.27□□□□□ -0.44
SRP54-208ENST00000555557 TICAM2Q86XR7 235 aa12.27□□□□□ -0.44
SRP54-208ENST00000555557 SUPT20HQ8NEM7 779 aa12.27□□□□□ -0.44
SRP54-208ENST00000555557 PSMD1Q99460 953 aa12.27□□□□□ -0.44
SRP54-208ENST00000555557 MXD3Q9BW11 206 aa12.27□□□□□ -0.44
SRP54-208ENST00000555557 MYO5AQ9Y4I1 1855 aaKnown RBP12.27□□□□□ -0.44
SRP54-208ENST00000555557 ZBTB22O15209 634 aa12.27□□□□□ -0.45
SRP54-208ENST00000555557 CYP7A1P22680 504 aa12.27□□□□□ -0.45
SRP54-208ENST00000555557 MECOMQ03112 1051 aa12.27□□□□□ -0.45
SRP54-208ENST00000555557 GRIPAP1Q4V328 841 aa12.27□□□□□ -0.45
SRP54-208ENST00000555557 MFSD14BQ5SR56 506 aa12.27□□□□□ -0.45
SRP54-208ENST00000555557 SOGA3Q5TF21 947 aa12.27□□□□□ -0.45
SRP54-208ENST00000555557 TTLL5Q6EMB2 1281 aa12.27□□□□□ -0.45
SRP54-208ENST00000555557 MIGA1Q8NAN2 632 aa12.27□□□□□ -0.45
SRP54-208ENST00000555557 NSUN4Q96CB9 384 aaKnown RBP12.27□□□□□ -0.45
SRP54-208ENST00000555557 SYT17Q9BSW7 474 aa12.27□□□□□ -0.45
SRP54-208ENST00000555557 CCDC171Q6TFL3 1326 aa12.26□□□□□ -0.45
SRP54-208ENST00000555557 EIF5BO60841 1220 aaKnown RBP12.26□□□□□ -0.45
SRP54-208ENST00000555557 RBM25P49756 843 aaKnown RBP12.26□□□□□ -0.45
SRP54-208ENST00000555557 PODNQ7Z5L7 613 aa12.26□□□□□ -0.45
SRP54-208ENST00000555557 SALL1Q9NSC2 1324 aa12.26□□□□□ -0.45
SRP54-208ENST00000555557 NFKBIEO00221 500 aa12.25□□□□□ -0.45
SRP54-208ENST00000555557 GPAA1O43292 621 aa12.25□□□□□ -0.45
SRP54-208ENST00000555557 LDHBP07195 334 aaKnown RBP12.25□□□□□ -0.45
SRP54-208ENST00000555557 NAA16Q6N069 864 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms