RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 SETBP1Q9Y6X0 1596 aa8.86□□□□□ -0.99
LINC00643-203ENST00000555518 ZNF142P52746 1687 aaPredicted RBP8.86□□□□□ -0.99
LINC00643-203ENST00000555518 PTPRMP28827 1452 aa8.86□□□□□ -0.99
LINC00643-203ENST00000555518 ATP9BO43861 1147 aa8.86□□□□□ -0.99
LINC00643-203ENST00000555518 EPB42P16452 691 aa8.86□□□□□ -0.99
LINC00643-203ENST00000555518 TBC1D8BQ0IIM8 1120 aa8.86□□□□□ -0.99
LINC00643-203ENST00000555518 ZNF280CQ8ND82 737 aa8.86□□□□□ -0.99
LINC00643-203ENST00000555518 HIRIP3Q9BW71 556 aaPredicted RBP8.86□□□□□ -0.99
LINC00643-203ENST00000555518 KIAA1024Q9UPX6 916 aa8.86□□□□□ -0.99
LINC00643-203ENST00000555518 SETD1AO15047 1707 aaKnown RBP8.85□□□□□ -0.99
LINC00643-203ENST00000555518 SLIT1O75093 1534 aa8.85□□□□□ -0.99
LINC00643-203ENST00000555518 RGS9O75916 674 aaPredicted RBP8.85□□□□□ -0.99
LINC00643-203ENST00000555518 CFAP70Q5T0N1 1121 aa8.85□□□□□ -0.99
LINC00643-203ENST00000555518 FMR1NBQ8N0W7 255 aaPredicted RBP8.85□□□□□ -0.99
LINC00643-203ENST00000555518 CARD11Q9BXL7 1154 aa8.85□□□□□ -0.99
LINC00643-203ENST00000555518 C14orf93Q9H972 538 aaKnown RBP8.85□□□□□ -0.99
LINC00643-203ENST00000555518 C11orf16Q9NQ32 467 aa8.85□□□□□ -0.99
LINC00643-203ENST00000555518 MKRN1Q9UHC7 482 aaKnown RBP8.85□□□□□ -0.99
LINC00643-203ENST00000555518 USP21Q9UK80 565 aa8.85□□□□□ -0.99
LINC00643-203ENST00000555518 CEP170BQ9Y4F5 1589 aaPredicted RBP8.85□□□□□ -0.99
LINC00643-203ENST00000555518 TMEM2Q9UHN6 1383 aa8.85□□□□□ -0.99
LINC00643-203ENST00000555518 SCAF11Q99590 1463 aaKnown RBP8.84□□□□□ -0.99
LINC00643-203ENST00000555518 KRTAP9-6A0A140TA67 174 aa8.84□□□□□ -0.99
LINC00643-203ENST00000555518 AFF1P51825 1210 aaKnown RBP8.84□□□□□ -0.99
LINC00643-203ENST00000555518 CCINQ13939 588 aa8.84□□□□□ -0.99
LINC00643-203ENST00000555518 PSAPL1Q6NUJ1 521 aa8.84□□□□□ -0.99
LINC00643-203ENST00000555518 TP53INP1Q96A56 240 aa8.84□□□□□ -0.99
LINC00643-203ENST00000555518 C2orf49Q9BVC5 232 aaPredicted RBP8.84□□□□□ -0.99
LINC00643-203ENST00000555518 IGFLR1Q9H665 355 aa8.84□□□□□ -0.99
LINC00643-203ENST00000555518 DNAJB12Q9NXW2 375 aaKnown RBP8.84□□□□□ -0.99
LINC00643-203ENST00000555518 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.84□□□□□ -0.99
LINC00643-203ENST00000555518 NUDT8Q8WV74 236 aa8.83□□□□□ -1
LINC00643-203ENST00000555518 GSX2Q9BZM3 304 aa8.83□□□□□ -1
LINC00643-203ENST00000555518 FRRS1LQ9P0K9 344 aa8.83□□□□□ -1
LINC00643-203ENST00000555518 ATAD2Q6PL18 1390 aa8.83□□□□□ -1
LINC00643-203ENST00000555518 ALKQ9UM73 1620 aa8.83□□□□□ -1
LINC00643-203ENST00000555518 SETD1BQ9UPS6 1966 aaKnown RBP8.82□□□□□ -1
LINC00643-203ENST00000555518 TGFBR3LH3BV60 316 aa8.82□□□□□ -1
LINC00643-203ENST00000555518 FLIIQ13045 1269 aa8.82□□□□□ -1
LINC00643-203ENST00000555518 RTN1Q16799 776 aa8.82□□□□□ -1
LINC00643-203ENST00000555518 TSEN2Q8NCE0 465 aaKnown RBP8.82□□□□□ -1
LINC00643-203ENST00000555518 TESK2Q96S53 571 aa8.82□□□□□ -1
LINC00643-203ENST00000555518 POLR1AO95602 1720 aaPredicted RBP8.82□□□□□ -1
LINC00643-203ENST00000555518 WASHC2AQ641Q2 1341 aa8.81□□□□□ -1
LINC00643-203ENST00000555518 ADAMTS13Q76LX8 1427 aa8.81□□□□□ -1
LINC00643-203ENST00000555518 ST20-MTHFSA0A0A6YYL1 179 aa8.81□□□□□ -1
LINC00643-203ENST00000555518 MAP3K6O95382 1288 aa8.81□□□□□ -1
LINC00643-203ENST00000555518 ARID4AP29374 1257 aaPredicted RBP8.81□□□□□ -1
LINC00643-203ENST00000555518 ILDR2Q71H61 639 aa8.81□□□□□ -1
LINC00643-203ENST00000555518 SLC51AQ86UW1 340 aa8.81□□□□□ -1
LINC00643-203ENST00000555518 SSBP4Q9BWG4 385 aaPredicted RBP8.81□□□□□ -1
LINC00643-203ENST00000555518 CCDC7Q96M83 1385 aa8.81□□□□□ -1
LINC00643-203ENST00000555518 MED14O60244 1454 aa8.81□□□□□ -1
LINC00643-203ENST00000555518 KIF7Q2M1P5 1343 aa8.8□□□□□ -1
LINC00643-203ENST00000555518 C21orf2O43822 256 aa8.8□□□□□ -1
LINC00643-203ENST00000555518 LTKP29376 864 aa8.8□□□□□ -1
LINC00643-203ENST00000555518 SEC13P55735 322 aa8.8□□□□□ -1
LINC00643-203ENST00000555518 HDGFL1Q5TGJ6 251 aa8.8□□□□□ -1
LINC00643-203ENST00000555518 MSL1Q68DK7 614 aa8.8□□□□□ -1
LINC00643-203ENST00000555518 SHISA2Q6UWI4 295 aa8.8□□□□□ -1
LINC00643-203ENST00000555518 DMRTC2Q8IXT2 367 aaPredicted RBP8.8□□□□□ -1
LINC00643-203ENST00000555518 PLEKHG1Q9ULL1 1385 aa8.8□□□□□ -1
LINC00643-203ENST00000555518 ARHGEF28Q8N1W1 1705 aaKnown RBP8.8□□□□□ -1
LINC00643-203ENST00000555518 HYAL3O43820 417 aaPredicted RBP8.79□□□□□ -1
LINC00643-203ENST00000555518 NFKB1P19838 968 aa8.79□□□□□ -1
LINC00643-203ENST00000555518 FBXO11Q86XK2 927 aa8.79□□□□□ -1
LINC00643-203ENST00000555518 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.79□□□□□ -1
LINC00643-203ENST00000555518 SCG3Q8WXD2 468 aaKnown RBP8.79□□□□□ -1
LINC00643-203ENST00000555518 TTC9Q92623 222 aa8.79□□□□□ -1
LINC00643-203ENST00000555518 ZNF594Q96JF6 807 aaPredicted RBP8.79□□□□□ -1
LINC00643-203ENST00000555518 DISP3Q9P2K9 1392 aa8.78□□□□□ -1
LINC00643-203ENST00000555518 SBNO2Q9Y2G9 1366 aa8.78□□□□□ -1
LINC00643-203ENST00000555518 DIEXFQ68CQ4 756 aaKnown RBP8.78□□□□□ -1
LINC00643-203ENST00000555518 TMEM132EQ6IEE7 984 aa8.78□□□□□ -1
LINC00643-203ENST00000555518 IGF2-ASQ6U949 168 aa8.78□□□□□ -1
LINC00643-203ENST00000555518 FAM35AQ86V20 835 aa8.78□□□□□ -1
LINC00643-203ENST00000555518 POM121Q96HA1 1249 aa8.78□□□□□ -1
LINC00643-203ENST00000555518 NGLY1Q96IV0 654 aa8.78□□□□□ -1
LINC00643-203ENST00000555518 UCN2Q96RP3 112 aa8.78□□□□□ -1
LINC00643-203ENST00000555518 DLC1Q96QB1 1528 aa8.78□□□□□ -1
LINC00643-203ENST00000555518 YTHDC2Q9H6S0 1430 aaKnown RBP8.78□□□□□ -1
LINC00643-203ENST00000555518 METP08581 1390 aa8.77□□□□□ -1.01
LINC00643-203ENST00000555518 DKK1O94907 266 aa8.77□□□□□ -1.01
LINC00643-203ENST00000555518 RASA1P20936 1047 aa8.77□□□□□ -1.01
LINC00643-203ENST00000555518 ERICH6Q7L0X2 663 aa8.77□□□□□ -1.01
LINC00643-203ENST00000555518 ADAMTS19Q8TE59 1207 aa8.77□□□□□ -1.01
LINC00643-203ENST00000555518 NAGPAQ9UK23 515 aa8.77□□□□□ -1.01
LINC00643-203ENST00000555518 RNF112Q9ULX5 631 aa8.77□□□□□ -1.01
LINC00643-203ENST00000555518 TECPR2O15040 1411 aa8.77□□□□□ -1.01
LINC00643-203ENST00000555518 LRPPRCP42704 1394 aaKnown RBP8.76□□□□□ -1.01
LINC00643-203ENST00000555518 EIF3AQ14152 1382 aaKnown RBP8.76□□□□□ -1.01
LINC00643-203ENST00000555518 C14orf37Q86TY3 774 aa8.76□□□□□ -1.01
LINC00643-203ENST00000555518 WFDC8Q8IUA0 241 aa8.76□□□□□ -1.01
LINC00643-203ENST00000555518 THEMISQ8N1K5 641 aaPredicted RBP8.76□□□□□ -1.01
LINC00643-203ENST00000555518 TRPM4Q8TD43 1214 aa8.76□□□□□ -1.01
LINC00643-203ENST00000555518 WFDC12Q8WWY7 111 aa8.76□□□□□ -1.01
LINC00643-203ENST00000555518 KNDC1Q76NI1 1749 aa8.76□□□□□ -1.01
LINC00643-203ENST00000555518 QRICH2Q9H0J4 1663 aa8.75□□□□□ -1.01
LINC00643-203ENST00000555518 CPS1P31327 1500 aa8.75□□□□□ -1.01
LINC00643-203ENST00000555518 ABCC11Q96J66 1382 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms