RNA–Protein interactions for RNA: ENST00000555503.1

GPHN-208, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-208ENST00000555503 RASA1P20936 1047 aa9.25□□□□□ -0.93
GPHN-208ENST00000555503 IL6STP40189 918 aaPredicted RBP9.25□□□□□ -0.93
GPHN-208ENST00000555503 NCOA4Q13772 614 aa9.25□□□□□ -0.93
GPHN-208ENST00000555503 DCTN1Q14203 1278 aa9.25□□□□□ -0.93
GPHN-208ENST00000555503 ERFEQ4G0M1 354 aa9.25□□□□□ -0.93
GPHN-208ENST00000555503 DMRTA1Q5VZB9 504 aa9.25□□□□□ -0.93
GPHN-208ENST00000555503 POTEEQ6S8J3 1075 aa9.25□□□□□ -0.93
GPHN-208ENST00000555503 MCM10Q7L590 875 aa9.25□□□□□ -0.93
GPHN-208ENST00000555503 DZIP3Q86Y13 1208 aaKnown RBP9.25□□□□□ -0.93
GPHN-208ENST00000555503 JMYQ8N9B5 988 aa9.25□□□□□ -0.93
GPHN-208ENST00000555503 FAM200AQ8TCP9 573 aa9.25□□□□□ -0.93
GPHN-208ENST00000555503 SETDB2Q96T68 719 aa9.25□□□□□ -0.93
GPHN-208ENST00000555503 BRIP1Q9BX63 1249 aa9.25□□□□□ -0.93
GPHN-208ENST00000555503 GPSM3Q9Y4H4 160 aa9.25□□□□□ -0.93
GPHN-208ENST00000555503 MCCD1P59942 119 aaPredicted RBP9.24□□□□□ -0.93
GPHN-208ENST00000555503 ST5P78524 1137 aa9.24□□□□□ -0.93
GPHN-208ENST00000555503 PTPRNQ16849 979 aa9.24□□□□□ -0.93
GPHN-208ENST00000555503 SLFNL1Q499Z3 407 aa9.24□□□□□ -0.93
GPHN-208ENST00000555503 NOM1Q5C9Z4 860 aaKnown RBP9.24□□□□□ -0.93
GPHN-208ENST00000555503 PRPF40BQ6NWY9 871 aaKnown RBP9.24□□□□□ -0.93
GPHN-208ENST00000555503 BLOC1S3Q6QNY0 202 aa9.24□□□□□ -0.93
GPHN-208ENST00000555503 ANKMY2Q8IV38 441 aa9.24□□□□□ -0.93
GPHN-208ENST00000555503 PHTF2Q8N3S3 785 aa9.24□□□□□ -0.93
GPHN-208ENST00000555503 TEX13AQ9BXU3 409 aaPredicted RBP9.24□□□□□ -0.93
GPHN-208ENST00000555503 TAOK3Q9H2K8 898 aa9.24□□□□□ -0.93
GPHN-208ENST00000555503 MAP10Q9P2G4 905 aa9.24□□□□□ -0.93
GPHN-208ENST00000555503 CEP126Q9P2H0 1117 aa9.24□□□□□ -0.93
GPHN-208ENST00000555503 VPS9D1Q9Y2B5 631 aa9.24□□□□□ -0.93
GPHN-208ENST00000555503 USP16Q9Y5T5 823 aa9.24□□□□□ -0.93
GPHN-208ENST00000555503 LTBP1Q14766 1721 aa9.24□□□□□ -0.93
GPHN-208ENST00000555503 NPC1L1Q9UHC9 1359 aa9.24□□□□□ -0.93
GPHN-208ENST00000555503 DDNO94850 711 aaPredicted RBP9.23□□□□□ -0.93
GPHN-208ENST00000555503 U2AF1L5P0DN76 240 aaPredicted RBP9.23□□□□□ -0.93
GPHN-208ENST00000555503 ATP2B4P23634 1241 aa9.23□□□□□ -0.93
GPHN-208ENST00000555503 U2AF1Q01081 240 aaKnown RBP eCLIP9.23□□□□□ -0.93
GPHN-208ENST00000555503 SWI5Q1ZZU3 235 aa9.23□□□□□ -0.93
GPHN-208ENST00000555503 BRICD5Q6PL45 260 aa9.23□□□□□ -0.93
GPHN-208ENST00000555503 OLFM4Q6UX06 510 aa9.23□□□□□ -0.93
GPHN-208ENST00000555503 NBPF5PQ86XG9 351 aaPredicted RBP9.23□□□□□ -0.93
GPHN-208ENST00000555503 PLPP7Q8NBV4 271 aa9.23□□□□□ -0.93
GPHN-208ENST00000555503 CFAP53Q96M91 514 aa9.23□□□□□ -0.93
GPHN-208ENST00000555503 KIAA1522Q9P206 1035 aaPredicted RBP9.23□□□□□ -0.93
GPHN-208ENST00000555503 SPEF2Q9C093 1822 aa9.22□□□□□ -0.93
GPHN-208ENST00000555503 HSPA1AP0DMV8 641 aaKnown RBP9.22□□□□□ -0.93
GPHN-208ENST00000555503 HSPA1BP0DMV9 641 aaKnown RBP9.22□□□□□ -0.93
GPHN-208ENST00000555503 SRGNP10124 158 aa9.22□□□□□ -0.93
GPHN-208ENST00000555503 JUNDP17535 347 aa9.22□□□□□ -0.93
GPHN-208ENST00000555503 SERPINB4P48594 390 aa9.22□□□□□ -0.93
GPHN-208ENST00000555503 STYK1Q6J9G0 422 aa9.22□□□□□ -0.93
GPHN-208ENST00000555503 RNF135Q8IUD6 432 aa9.22□□□□□ -0.93
GPHN-208ENST00000555503 TNS4Q8IZW8 715 aa9.22□□□□□ -0.93
GPHN-208ENST00000555503 C1orf216Q8TAB5 229 aa9.22□□□□□ -0.93
GPHN-208ENST00000555503 RTF1Q92541 710 aaKnown RBP9.22□□□□□ -0.93
GPHN-208ENST00000555503 CNKSR1Q969H4 720 aa9.22□□□□□ -0.93
GPHN-208ENST00000555503 PRR14Q9BWN1 585 aa9.22□□□□□ -0.93
GPHN-208ENST00000555503 NBPF3Q9H094 633 aa9.22□□□□□ -0.93
GPHN-208ENST00000555503 MIS18AQ9NYP9 233 aa9.22□□□□□ -0.93
GPHN-208ENST00000555503 COL4A5P29400 1685 aa9.21□□□□□ -0.93
GPHN-208ENST00000555503 PPP2R1AP30153 589 aa9.21□□□□□ -0.94
GPHN-208ENST00000555503 NBPF10Q6P3W6 841 aaKnown RBP9.21□□□□□ -0.94
GPHN-208ENST00000555503 NGEFQ8N5V2 710 aa9.21□□□□□ -0.94
GPHN-208ENST00000555503 NBPF15Q8N660 670 aa9.21□□□□□ -0.94
GPHN-208ENST00000555503 GPKOWQ92917 476 aaPredicted RBP eCLIP9.21□□□□□ -0.94
GPHN-208ENST00000555503 MRRFQ96E11 262 aaKnown RBP9.21□□□□□ -0.94
GPHN-208ENST00000555503 MASTLQ96GX5 879 aa9.21□□□□□ -0.94
GPHN-208ENST00000555503 ZFRQ96KR1 1074 aaKnown RBP9.21□□□□□ -0.94
GPHN-208ENST00000555503 NIP7Q9Y221 180 aaKnown RBP eCLIP9.21□□□□□ -0.94
GPHN-208ENST00000555503 DDX60Q8IY21 1712 aaKnown RBP9.21□□□□□ -0.94
GPHN-208ENST00000555503 ZNF541Q9H0D2 1346 aa9.21□□□□□ -0.94
GPHN-208ENST00000555503 LTBP3Q9NS15 1303 aa9.21□□□□□ -0.94
GPHN-208ENST00000555503 BHMG1C9JSJ3 638 aaPredicted RBP9.2□□□□□ -0.94
GPHN-208ENST00000555503 SNRPA1P09661 255 aaKnown RBP9.2□□□□□ -0.94
GPHN-208ENST00000555503 ZNF16P17020 682 aaPredicted RBP9.2□□□□□ -0.94
GPHN-208ENST00000555503 PTK2Q05397 1052 aa9.2□□□□□ -0.94
GPHN-208ENST00000555503 HLFQ16534 295 aa9.2□□□□□ -0.94
GPHN-208ENST00000555503 MAP7D1Q3KQU3 841 aa9.2□□□□□ -0.94
GPHN-208ENST00000555503 PDXDC2PQ6P474 469 aa9.2□□□□□ -0.94
GPHN-208ENST00000555503 THAP11Q96EK4 314 aa9.2□□□□□ -0.94
GPHN-208ENST00000555503 OCSTAMPQ9BR26 566 aa9.2□□□□□ -0.94
GPHN-208ENST00000555503 ZNF277Q9NRM2 450 aaPredicted RBP9.2□□□□□ -0.94
GPHN-208ENST00000555503 PDZRN3Q9UPQ7 1066 aa9.2□□□□□ -0.94
GPHN-208ENST00000555503 ZNF652Q9Y2D9 606 aa9.2□□□□□ -0.94
GPHN-208ENST00000555503 CASP8AP2Q9UKL3 1982 aa9.2□□□□□ -0.94
GPHN-208ENST00000555503 ABCC12Q96J65 1359 aa9.2□□□□□ -0.94
GPHN-208ENST00000555503 PBX2P40425 430 aa9.19□□□□□ -0.94
GPHN-208ENST00000555503 MARSP56192 900 aaKnown RBP9.19□□□□□ -0.94
GPHN-208ENST00000555503 DPYDQ12882 1025 aa9.19□□□□□ -0.94
GPHN-208ENST00000555503 EML3Q32P44 896 aa9.19□□□□□ -0.94
GPHN-208ENST00000555503 CCDC93Q567U6 631 aa9.19□□□□□ -0.94
GPHN-208ENST00000555503 EAPPQ56P03 285 aaPredicted RBP9.19□□□□□ -0.94
GPHN-208ENST00000555503 TRAF7Q6Q0C0 670 aa9.19□□□□□ -0.94
GPHN-208ENST00000555503 SLC51AQ86UW1 340 aa9.19□□□□□ -0.94
GPHN-208ENST00000555503 OGFOD1Q8N543 542 aa9.19□□□□□ -0.94
GPHN-208ENST00000555503 NUDCQ9Y266 331 aa9.19□□□□□ -0.94
GPHN-208ENST00000555503 NPR1P16066 1061 aa9.18□□□□□ -0.94
GPHN-208ENST00000555503 GTF2E1P29083 439 aaPredicted RBP9.18□□□□□ -0.94
GPHN-208ENST00000555503 SOGA3Q5TF21 947 aa9.18□□□□□ -0.94
GPHN-208ENST00000555503 ARMC2Q8NEN0 867 aa9.18□□□□□ -0.94
GPHN-208ENST00000555503 C7orf43Q8WVR3 580 aa9.18□□□□□ -0.94
GPHN-208ENST00000555503 BCL2L13Q9BXK5 485 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms