RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 PRPF40AO75400 957 aaKnown RBP9.59□□□□□ -0.87
LINC00641-201ENST00000555379 CCDC112Q8NEF3 446 aa9.59□□□□□ -0.87
LINC00641-201ENST00000555379 ALS2CR12Q96Q35 445 aa9.59□□□□□ -0.87
LINC00641-201ENST00000555379 USP25Q9UHP3 1055 aa9.59□□□□□ -0.87
LINC00641-201ENST00000555379 TMEM94Q12767 1356 aa9.59□□□□□ -0.87
LINC00641-201ENST00000555379 ATP5J2-PTCD1G3V325 749 aa9.59□□□□□ -0.87
LINC00641-201ENST00000555379 NDC80O14777 642 aa9.59□□□□□ -0.87
LINC00641-201ENST00000555379 CLCN1P35523 988 aa9.59□□□□□ -0.87
LINC00641-201ENST00000555379 CCDC102BQ68D86 513 aa9.59□□□□□ -0.87
LINC00641-201ENST00000555379 ORC3Q9UBD5 711 aaPredicted RBP9.59□□□□□ -0.87
LINC00641-201ENST00000555379 IVNS1ABPQ9Y6Y0 642 aa9.59□□□□□ -0.87
LINC00641-201ENST00000555379 PLEKHG2Q9H7P9 1386 aa9.59□□□□□ -0.87
LINC00641-201ENST00000555379 SPDYE4A6NLX3 237 aa9.59□□□□□ -0.87
LINC00641-201ENST00000555379 SSFA2P28290 1259 aa9.59□□□□□ -0.87
LINC00641-201ENST00000555379 ENOX2Q16206 610 aaKnown RBP9.59□□□□□ -0.87
LINC00641-201ENST00000555379 DPP8Q6V1X1 898 aaPredicted RBP9.59□□□□□ -0.87
LINC00641-201ENST00000555379 TESK2Q96S53 571 aa9.59□□□□□ -0.87
LINC00641-201ENST00000555379 PABPN1LA6NDY0 278 aaKnown RBP9.59□□□□□ -0.87
LINC00641-201ENST00000555379 POLR3GO15318 223 aaPredicted RBP9.59□□□□□ -0.87
LINC00641-201ENST00000555379 RXRBP28702 533 aa9.59□□□□□ -0.87
LINC00641-201ENST00000555379 HSPA2P54652 639 aa9.59□□□□□ -0.87
LINC00641-201ENST00000555379 BMS1Q14692 1282 aaKnown RBP9.59□□□□□ -0.87
LINC00641-201ENST00000555379 FOXD4L6Q3SYB3 417 aaPredicted RBP9.59□□□□□ -0.87
LINC00641-201ENST00000555379 FOXD4L3Q6VB84 417 aaPredicted RBP9.59□□□□□ -0.87
LINC00641-201ENST00000555379 IQCDQ96DY2 449 aa9.59□□□□□ -0.87
LINC00641-201ENST00000555379 GOPCQ9HD26 462 aa9.59□□□□□ -0.87
LINC00641-201ENST00000555379 CEP128Q6ZU80 1094 aa9.58□□□□□ -0.88
LINC00641-201ENST00000555379 SPC25Q9HBM1 224 aa9.58□□□□□ -0.88
LINC00641-201ENST00000555379 H0YCG3 227 aa9.58□□□□□ -0.88
LINC00641-201ENST00000555379 STX1AQ16623 288 aa9.58□□□□□ -0.88
LINC00641-201ENST00000555379 CNNM3Q8NE01 707 aa9.58□□□□□ -0.88
LINC00641-201ENST00000555379 MIPOL1Q8TD10 442 aa9.58□□□□□ -0.88
LINC00641-201ENST00000555379 ZMYM4Q5VZL5 1548 aa9.58□□□□□ -0.88
LINC00641-201ENST00000555379 ZBED4O75132 1171 aa9.58□□□□□ -0.88
LINC00641-201ENST00000555379 LRCH2Q5VUJ6 765 aa9.58□□□□□ -0.88
LINC00641-201ENST00000555379 SEPT14Q6ZU15 432 aa9.58□□□□□ -0.88
LINC00641-201ENST00000555379 MICALCLQ6ZW33 695 aa9.58□□□□□ -0.88
LINC00641-201ENST00000555379 EXOC1Q9NV70 894 aa9.58□□□□□ -0.88
LINC00641-201ENST00000555379 EXOC7Q9UPT5 735 aa9.58□□□□□ -0.88
LINC00641-201ENST00000555379 ADRA2BP18089 450 aa9.58□□□□□ -0.88
LINC00641-201ENST00000555379 TTC31Q49AM3 519 aaPredicted RBP9.58□□□□□ -0.88
LINC00641-201ENST00000555379 ARHGAP29Q52LW3 1261 aa9.58□□□□□ -0.88
LINC00641-201ENST00000555379 SYCP3Q8IZU3 236 aa9.58□□□□□ -0.88
LINC00641-201ENST00000555379 CNPY4Q8N129 248 aa9.58□□□□□ -0.88
LINC00641-201ENST00000555379 RNF216Q9NWF9 866 aaPredicted RBP9.58□□□□□ -0.88
LINC00641-201ENST00000555379 MIS18AQ9NYP9 233 aa9.58□□□□□ -0.88
LINC00641-201ENST00000555379 CCDC117Q8IWD4 279 aaPredicted RBP9.57□□□□□ -0.88
LINC00641-201ENST00000555379 ABCC3O15438 1527 aa9.57□□□□□ -0.88
LINC00641-201ENST00000555379 SHTN1A0MZ66 631 aa9.57□□□□□ -0.88
LINC00641-201ENST00000555379 IVLP07476 585 aa9.57□□□□□ -0.88
LINC00641-201ENST00000555379 IL13P35225 146 aa9.57□□□□□ -0.88
LINC00641-201ENST00000555379 KRT79Q5XKE5 535 aa9.57□□□□□ -0.88
LINC00641-201ENST00000555379 HAUS3Q68CZ6 603 aa9.57□□□□□ -0.88
LINC00641-201ENST00000555379 ACSBG1Q96GR2 724 aa9.57□□□□□ -0.88
LINC00641-201ENST00000555379 CCDC85AQ96PX6 553 aaPredicted RBP9.57□□□□□ -0.88
LINC00641-201ENST00000555379 RABGAP1Q9Y3P9 1069 aa9.57□□□□□ -0.88
LINC00641-201ENST00000555379 MAP4K4O95819 1239 aaPredicted RBP9.57□□□□□ -0.88
LINC00641-201ENST00000555379 RPL13P26373 211 aaKnown RBP9.57□□□□□ -0.88
LINC00641-201ENST00000555379 EXOC8Q8IYI6 725 aa9.57□□□□□ -0.88
LINC00641-201ENST00000555379 LLPHQ9BRT6 129 aaKnown RBP9.57□□□□□ -0.88
LINC00641-201ENST00000555379 RASSF4Q9H2L5 321 aa9.57□□□□□ -0.88
LINC00641-201ENST00000555379 NSFL1CQ9UNZ2 370 aaKnown RBP9.57□□□□□ -0.88
LINC00641-201ENST00000555379 NCOA3Q9Y6Q9 1424 aa9.57□□□□□ -0.88
LINC00641-201ENST00000555379 AGLP35573 1532 aa9.57□□□□□ -0.88
LINC00641-201ENST00000555379 CCDC40Q4G0X9 1142 aa9.57□□□□□ -0.88
LINC00641-201ENST00000555379 THUMPD2Q9BTF0 503 aaKnown RBP9.57□□□□□ -0.88
LINC00641-201ENST00000555379 MNAT1P51948 309 aa9.57□□□□□ -0.88
LINC00641-201ENST00000555379 SLC9C2Q5TAH2 1124 aa9.57□□□□□ -0.88
LINC00641-201ENST00000555379 HS2ST1Q7LGA3 356 aa9.57□□□□□ -0.88
LINC00641-201ENST00000555379 SREK1Q8WXA9 508 aaKnown RBP9.57□□□□□ -0.88
LINC00641-201ENST00000555379 DCTPP1Q9H773 170 aa9.57□□□□□ -0.88
LINC00641-201ENST00000555379 UFL1O94874 794 aa9.56□□□□□ -0.88
LINC00641-201ENST00000555379 PARP1P09874 1014 aaKnown RBP9.56□□□□□ -0.88
LINC00641-201ENST00000555379 LARGE2Q8N3Y3 721 aa9.56□□□□□ -0.88
LINC00641-201ENST00000555379 LMBR1Q8WVP7 490 aa9.56□□□□□ -0.88
LINC00641-201ENST00000555379 ARPP21Q9UBL0 812 aaPredicted RBP9.56□□□□□ -0.88
LINC00641-201ENST00000555379 SFPQP23246 707 aaKnown RBP eCLIP9.56□□□□□ -0.88
LINC00641-201ENST00000555379 PAFAH1B1P43034 410 aa9.56□□□□□ -0.88
LINC00641-201ENST00000555379 RTEL1Q9NZ71 1219 aa9.56□□□□□ -0.88
LINC00641-201ENST00000555379 LEMD3Q9Y2U8 911 aa9.56□□□□□ -0.88
LINC00641-201ENST00000555379 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.56□□□□□ -0.88
LINC00641-201ENST00000555379 GCOM1H8Y6P7 765 aaPredicted RBP9.56□□□□□ -0.88
LINC00641-201ENST00000555379 CHL1O00533 1208 aa9.56□□□□□ -0.88
LINC00641-201ENST00000555379 APBA3O96018 575 aa9.56□□□□□ -0.88
LINC00641-201ENST00000555379 MYZAPP0CAP1 466 aa9.56□□□□□ -0.88
LINC00641-201ENST00000555379 ACTN2P35609 894 aa9.56□□□□□ -0.88
LINC00641-201ENST00000555379 IL6STP40189 918 aaPredicted RBP9.56□□□□□ -0.88
LINC00641-201ENST00000555379 NAPAP54920 295 aa9.56□□□□□ -0.88
LINC00641-201ENST00000555379 KIF4BQ2VIQ3 1234 aa9.56□□□□□ -0.88
LINC00641-201ENST00000555379 TEX11Q8IYF3 940 aa9.56□□□□□ -0.88
LINC00641-201ENST00000555379 CHURC1Q8WUH1 139 aa9.56□□□□□ -0.88
LINC00641-201ENST00000555379 GPR108Q9NPR9 543 aa9.56□□□□□ -0.88
LINC00641-201ENST00000555379 F6X3S4 739 aa9.56□□□□□ -0.88
LINC00641-201ENST00000555379 PSMA7O14818 248 aa9.56□□□□□ -0.88
LINC00641-201ENST00000555379 RNF168Q8IYW5 571 aaPredicted RBP9.56□□□□□ -0.88
LINC00641-201ENST00000555379 GABPB2Q8TAK5 448 aaPredicted RBP9.56□□□□□ -0.88
LINC00641-201ENST00000555379 IWS1Q96ST2 819 aa9.56□□□□□ -0.88
LINC00641-201ENST00000555379 STX8Q9UNK0 236 aa9.56□□□□□ -0.88
LINC00641-201ENST00000555379 SAMM50Q9Y512 469 aa9.56□□□□□ -0.88
LINC00641-201ENST00000555379 CEP83Q9Y592 693 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms