RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 IRS2Q9Y4H2 1338 aa16.75■□□□□ 0.27
XRCC3-212ENST00000555231 COL1A1P02452 1464 aaPredicted RBP16.75■□□□□ 0.27
XRCC3-212ENST00000555231 WWC1Q8IX03 1113 aa16.75■□□□□ 0.27
XRCC3-212ENST00000555231 CHMP3Q9Y3E7 222 aa16.75■□□□□ 0.27
XRCC3-212ENST00000555231 CACNA1FO60840 1977 aa16.75■□□□□ 0.27
XRCC3-212ENST00000555231 AOX1Q06278 1338 aa16.74■□□□□ 0.27
XRCC3-212ENST00000555231 MANSC4A6NHS7 340 aaPredicted RBP16.74■□□□□ 0.27
XRCC3-212ENST00000555231 CFAP100Q494V2 611 aa16.74■□□□□ 0.27
XRCC3-212ENST00000555231 IFNL1Q8IU54 200 aa16.74■□□□□ 0.27
XRCC3-212ENST00000555231 LINS1Q8NG48 757 aa16.74■□□□□ 0.27
XRCC3-212ENST00000555231 WNK4Q96J92 1243 aa16.74■□□□□ 0.27
XRCC3-212ENST00000555231 VEZTQ9HBM0 779 aa16.74■□□□□ 0.27
XRCC3-212ENST00000555231 TRIM17Q9Y577 477 aa16.74■□□□□ 0.27
XRCC3-212ENST00000555231 LAMB1P07942 1786 aa16.74■□□□□ 0.27
XRCC3-212ENST00000555231 IGF2BP3O00425 579 aaKnown RBP eCLIP16.73■□□□□ 0.27
XRCC3-212ENST00000555231 PPP1R12BO60237 982 aaPredicted RBP16.73■□□□□ 0.27
XRCC3-212ENST00000555231 ALDH1A1P00352 501 aa16.73■□□□□ 0.27
XRCC3-212ENST00000555231 MAP3K11Q16584 847 aa16.73■□□□□ 0.27
XRCC3-212ENST00000555231 NBPF12Q5TAG4 269 aaPredicted RBP16.73■□□□□ 0.27
XRCC3-212ENST00000555231 MTMR14Q8NCE2 650 aa16.73■□□□□ 0.27
XRCC3-212ENST00000555231 PRMT6Q96LA8 375 aaPredicted RBP16.73■□□□□ 0.27
XRCC3-212ENST00000555231 PLIN1O60240 522 aa16.72■□□□□ 0.27
XRCC3-212ENST00000555231 FOXO4P98177 505 aa16.72■□□□□ 0.27
XRCC3-212ENST00000555231 CCDC27Q2M243 656 aa16.72■□□□□ 0.27
XRCC3-212ENST00000555231 ZNF594Q96JF6 807 aaPredicted RBP16.72■□□□□ 0.27
XRCC3-212ENST00000555231 SPDYE2BA6NHP3 402 aa16.71■□□□□ 0.27
XRCC3-212ENST00000555231 F6X3S4 739 aa16.71■□□□□ 0.27
XRCC3-212ENST00000555231 SPDYE6P0CI01 402 aa16.71■□□□□ 0.27
XRCC3-212ENST00000555231 ZBTB48P10074 688 aaPredicted RBP16.71■□□□□ 0.27
XRCC3-212ENST00000555231 IL1R1P14778 569 aa16.71■□□□□ 0.27
XRCC3-212ENST00000555231 RBM5P52756 815 aaKnown RBP eCLIP16.71■□□□□ 0.27
XRCC3-212ENST00000555231 INHBEP58166 350 aa16.71■□□□□ 0.27
XRCC3-212ENST00000555231 IFIT5Q13325 482 aaKnown RBP16.71■□□□□ 0.27
XRCC3-212ENST00000555231 C15orf52Q6ZUT6 534 aaKnown RBP16.71■□□□□ 0.27
XRCC3-212ENST00000555231 OTOP1Q7RTM1 612 aa16.71■□□□□ 0.27
XRCC3-212ENST00000555231 ZNF804AQ7Z570 1209 aa16.71■□□□□ 0.27
XRCC3-212ENST00000555231 PPP2R3BQ9Y5P8 575 aa16.71■□□□□ 0.27
XRCC3-212ENST00000555231 OTOFQ9HC10 1997 aa16.71■□□□□ 0.27
XRCC3-212ENST00000555231 POTEFA5A3E0 1075 aa16.7■□□□□ 0.26
XRCC3-212ENST00000555231 MYO1BO43795 1136 aa16.7■□□□□ 0.26
XRCC3-212ENST00000555231 USP2O75604 605 aaPredicted RBP16.7■□□□□ 0.26
XRCC3-212ENST00000555231 GJA5P36382 358 aa16.7■□□□□ 0.26
XRCC3-212ENST00000555231 SUPT20HL1Q3ZLR7 823 aa16.7■□□□□ 0.26
XRCC3-212ENST00000555231 EPHA10Q5JZY3 1008 aa16.7■□□□□ 0.26
XRCC3-212ENST00000555231 SALL2Q9Y467 1007 aaPredicted RBP16.7■□□□□ 0.26
XRCC3-212ENST00000555231 FANCIQ9NVI1 1328 aa16.7■□□□□ 0.26
XRCC3-212ENST00000555231 RASA3Q14644 834 aa16.69■□□□□ 0.26
XRCC3-212ENST00000555231 LMBR1LQ6UX01 489 aa16.69■□□□□ 0.26
XRCC3-212ENST00000555231 CD99L2Q8TCZ2 262 aa16.69■□□□□ 0.26
XRCC3-212ENST00000555231 IL16Q14005 1332 aa16.69■□□□□ 0.26
XRCC3-212ENST00000555231 VAMP4O75379 141 aa16.68■□□□□ 0.26
XRCC3-212ENST00000555231 IREB2P48200 963 aaKnown RBP16.68■□□□□ 0.26
XRCC3-212ENST00000555231 FKBP1AP62942 108 aaKnown RBP16.68■□□□□ 0.26
XRCC3-212ENST00000555231 EXOSC9Q06265 439 aaKnown RBP16.68■□□□□ 0.26
XRCC3-212ENST00000555231 CRHR2Q13324 411 aa16.68■□□□□ 0.26
XRCC3-212ENST00000555231 TAF7LQ5H9L4 462 aa16.67■□□□□ 0.26
XRCC3-212ENST00000555231 BEND3Q5T5X7 828 aa16.67■□□□□ 0.26
XRCC3-212ENST00000555231 LDHAL6AQ6ZMR3 332 aa16.67■□□□□ 0.26
XRCC3-212ENST00000555231 ANKRD13AQ8IZ07 590 aa16.67■□□□□ 0.26
XRCC3-212ENST00000555231 ERO1AQ96HE7 468 aa16.67■□□□□ 0.26
XRCC3-212ENST00000555231 PTPN18Q99952 460 aa16.67■□□□□ 0.26
XRCC3-212ENST00000555231 ELP3Q9H9T3 547 aa16.67■□□□□ 0.26
XRCC3-212ENST00000555231 CNNM1Q9NRU3 951 aa16.67■□□□□ 0.26
XRCC3-212ENST00000555231 CAP1Q01518 475 aa16.66■□□□□ 0.26
XRCC3-212ENST00000555231 CCDC57Q2TAC2 916 aa16.66■□□□□ 0.26
XRCC3-212ENST00000555231 CDAN1Q8IWY9 1227 aa16.66■□□□□ 0.26
XRCC3-212ENST00000555231 TDRD3Q9H7E2 651 aaKnown RBP16.66■□□□□ 0.26
XRCC3-212ENST00000555231 ZNF70Q9UC06 446 aaPredicted RBP16.66■□□□□ 0.26
XRCC3-212ENST00000555231 PTPN22Q9Y2R2 807 aa16.66■□□□□ 0.26
XRCC3-212ENST00000555231 RBBP6Q7Z6E9 1792 aaKnown RBP16.66■□□□□ 0.26
XRCC3-212ENST00000555231 KIAA0100Q14667 2235 aaKnown RBP16.65■□□□□ 0.26
XRCC3-212ENST00000555231 UNCXA6NJT0 531 aa16.65■□□□□ 0.26
XRCC3-212ENST00000555231 GYG1P46976 350 aa16.65■□□□□ 0.26
XRCC3-212ENST00000555231 INTS3Q68E01 1043 aaKnown RBP16.65■□□□□ 0.26
XRCC3-212ENST00000555231 OTUD7BQ6GQQ9 843 aa16.65■□□□□ 0.26
XRCC3-212ENST00000555231 OPTNQ96CV9 577 aa16.65■□□□□ 0.26
XRCC3-212ENST00000555231 EFCC1Q9HA90 598 aa16.65■□□□□ 0.26
XRCC3-212ENST00000555231 TTF2Q9UNY4 1162 aaKnown RBP16.65■□□□□ 0.26
XRCC3-212ENST00000555231 FAM205AQ6ZU69 1335 aa16.65■□□□□ 0.26
XRCC3-212ENST00000555231 ARAP2Q8WZ64 1704 aa16.65■□□□□ 0.26
XRCC3-212ENST00000555231 SP3Q02447 781 aa16.64■□□□□ 0.25
XRCC3-212ENST00000555231 SPDYE2Q495Y8 402 aa16.64■□□□□ 0.25
XRCC3-212ENST00000555231 MFSD14BQ5SR56 506 aa16.64■□□□□ 0.25
XRCC3-212ENST00000555231 TDRD7Q8NHU6 1098 aaKnown RBP16.64■□□□□ 0.25
XRCC3-212ENST00000555231 CNKSR2Q8WXI2 1034 aa16.64■□□□□ 0.25
XRCC3-212ENST00000555231 TESPA1A2RU30 521 aaPredicted RBP16.63■□□□□ 0.25
XRCC3-212ENST00000555231 TCP10L2B9ZVM9 353 aa16.63■□□□□ 0.25
XRCC3-212ENST00000555231 GRM8O00222 908 aa16.63■□□□□ 0.25
XRCC3-212ENST00000555231 PUS3Q9BZE2 481 aaKnown RBP16.63■□□□□ 0.25
XRCC3-212ENST00000555231 EN2P19622 333 aaPredicted RBP16.62■□□□□ 0.25
XRCC3-212ENST00000555231 HIBADHP31937 336 aaKnown RBP16.62■□□□□ 0.25
XRCC3-212ENST00000555231 TNFAIP1Q13829 316 aa16.62■□□□□ 0.25
XRCC3-212ENST00000555231 GRIK5Q16478 980 aa16.62■□□□□ 0.25
XRCC3-212ENST00000555231 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.62■□□□□ 0.25
XRCC3-212ENST00000555231 DZIP1LQ8IYY4 767 aaKnown RBP16.62■□□□□ 0.25
XRCC3-212ENST00000555231 GCC1Q96CN9 775 aa16.62■□□□□ 0.25
XRCC3-212ENST00000555231 MS4A4AQ96JQ5 239 aa16.62■□□□□ 0.25
XRCC3-212ENST00000555231 FAM84BQ96KN1 310 aaPredicted RBP16.62■□□□□ 0.25
XRCC3-212ENST00000555231 TEPSINQ96N21 525 aa16.62■□□□□ 0.25
XRCC3-212ENST00000555231 TMEM39BQ9GZU3 492 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms