RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 SNW1Q13573 536 aaKnown RBP11.06□□□□□ -0.64
SYNE2-213ENST00000554805 ATL3Q6DD88 541 aa11.06□□□□□ -0.64
SYNE2-213ENST00000554805 ANKRD7Q92527 254 aa11.06□□□□□ -0.64
SYNE2-213ENST00000554805 IFNKQ9P0W0 207 aa11.06□□□□□ -0.64
SYNE2-213ENST00000554805 KDM3BQ7LBC6 1761 aa11.06□□□□□ -0.64
SYNE2-213ENST00000554805 KAT6BQ8WYB5 2073 aa11.06□□□□□ -0.64
SYNE2-213ENST00000554805 NUTM2BA6NNL0 878 aaPredicted RBP11.05□□□□□ -0.64
SYNE2-213ENST00000554805 NUTM2EB1AL46 878 aaPredicted RBP11.05□□□□□ -0.64
SYNE2-213ENST00000554805 ZNF771Q7L3S4 317 aaPredicted RBP11.05□□□□□ -0.64
SYNE2-213ENST00000554805 HOMER1Q86YM7 354 aa11.05□□□□□ -0.64
SYNE2-213ENST00000554805 NUTM2AQ8IVF1 878 aaPredicted RBP11.05□□□□□ -0.64
SYNE2-213ENST00000554805 KIF18AQ8NI77 898 aa11.05□□□□□ -0.64
SYNE2-213ENST00000554805 CARMIL3Q8ND23 1372 aa11.05□□□□□ -0.64
SYNE2-213ENST00000554805 H7C1W4 665 aa11.05□□□□□ -0.64
SYNE2-213ENST00000554805 ADORA1P30542 326 aa11.05□□□□□ -0.64
SYNE2-213ENST00000554805 SARM1Q6SZW1 724 aa11.05□□□□□ -0.64
SYNE2-213ENST00000554805 DHX40Q8IX18 779 aaKnown RBP11.05□□□□□ -0.64
SYNE2-213ENST00000554805 CGNQ9P2M7 1197 aaKnown RBP11.05□□□□□ -0.64
SYNE2-213ENST00000554805 PRDM4Q9UKN5 801 aa11.05□□□□□ -0.64
SYNE2-213ENST00000554805 RGPD2P0DJD1 1756 aa11.05□□□□□ -0.64
SYNE2-213ENST00000554805 OVOS2A0A0G2JMS6 1433 aa11.05□□□□□ -0.64
SYNE2-213ENST00000554805 KDM6AO15550 1401 aaPredicted RBP11.05□□□□□ -0.64
SYNE2-213ENST00000554805 NBPF26B4DH59 902 aa11.05□□□□□ -0.64
SYNE2-213ENST00000554805 ZNF213O14771 459 aa11.05□□□□□ -0.64
SYNE2-213ENST00000554805 NBPF14Q5TI25 921 aa11.05□□□□□ -0.64
SYNE2-213ENST00000554805 NBPF10Q6P3W6 841 aaKnown RBP11.05□□□□□ -0.64
SYNE2-213ENST00000554805 NBPF15Q8N660 670 aa11.05□□□□□ -0.64
SYNE2-213ENST00000554805 PRDM11Q9NQV5 511 aa11.05□□□□□ -0.64
SYNE2-213ENST00000554805 ZNF215Q9UL58 517 aaPredicted RBP11.05□□□□□ -0.64
SYNE2-213ENST00000554805 JCADQ9P266 1359 aa11.05□□□□□ -0.64
SYNE2-213ENST00000554805 RXRAP19793 462 aa11.04□□□□□ -0.64
SYNE2-213ENST00000554805 SFPQP23246 707 aaKnown RBP eCLIP11.04□□□□□ -0.64
SYNE2-213ENST00000554805 GSDMDP57764 484 aa11.04□□□□□ -0.64
SYNE2-213ENST00000554805 DMTNQ08495 405 aa11.04□□□□□ -0.64
SYNE2-213ENST00000554805 DPCR1Q3MIW9 517 aa11.04□□□□□ -0.64
SYNE2-213ENST00000554805 ADALQ6DHV7 355 aa11.04□□□□□ -0.64
SYNE2-213ENST00000554805 KCNG4Q8TDN1 519 aa11.04□□□□□ -0.64
SYNE2-213ENST00000554805 ZSCAN20P17040 1043 aaPredicted RBP11.04□□□□□ -0.64
SYNE2-213ENST00000554805 LMOD1P29536 600 aaPredicted RBP11.04□□□□□ -0.64
SYNE2-213ENST00000554805 EVA1CP58658 441 aa11.04□□□□□ -0.64
SYNE2-213ENST00000554805 RFX7Q2KHR2 1363 aa11.04□□□□□ -0.64
SYNE2-213ENST00000554805 NFXL1Q6ZNB6 911 aa11.04□□□□□ -0.64
SYNE2-213ENST00000554805 TOM1L2Q6ZVM7 507 aa11.04□□□□□ -0.64
SYNE2-213ENST00000554805 ENGASEQ8NFI3 743 aa11.04□□□□□ -0.64
SYNE2-213ENST00000554805 XPO4Q9C0E2 1151 aaKnown RBP11.04□□□□□ -0.64
SYNE2-213ENST00000554805 RTEL1Q9NZ71 1219 aa11.04□□□□□ -0.64
SYNE2-213ENST00000554805 KIAA1468Q9P260 1216 aa11.04□□□□□ -0.64
SYNE2-213ENST00000554805 FGAP02671 866 aa11.04□□□□□ -0.64
SYNE2-213ENST00000554805 FDPSP14324 419 aaKnown RBP11.04□□□□□ -0.64
SYNE2-213ENST00000554805 CASP7P55210 303 aa11.04□□□□□ -0.64
SYNE2-213ENST00000554805 CADPS2Q86UW7 1296 aa11.04□□□□□ -0.64
SYNE2-213ENST00000554805 NCOA7Q8NI08 942 aa11.04□□□□□ -0.64
SYNE2-213ENST00000554805 XAGE2Q96GT9 111 aa11.04□□□□□ -0.64
SYNE2-213ENST00000554805 ZAP70P43403 619 aa11.03□□□□□ -0.64
SYNE2-213ENST00000554805 MYSM1Q5VVJ2 828 aa11.03□□□□□ -0.64
SYNE2-213ENST00000554805 CPLX2Q6PUV4 134 aaKnown RBP11.03□□□□□ -0.64
SYNE2-213ENST00000554805 LRP10Q7Z4F1 713 aa11.03□□□□□ -0.64
SYNE2-213ENST00000554805 FMR1NBQ8N0W7 255 aaPredicted RBP11.03□□□□□ -0.64
SYNE2-213ENST00000554805 LINC00301Q8NCQ3 95 aa11.03□□□□□ -0.64
SYNE2-213ENST00000554805 ZNF202O95125 648 aa11.03□□□□□ -0.64
SYNE2-213ENST00000554805 ADAMTS2O95450 1211 aa11.03□□□□□ -0.64
SYNE2-213ENST00000554805 PI16Q6UXB8 463 aa11.03□□□□□ -0.64
SYNE2-213ENST00000554805 ILDR1Q86SU0 546 aaPredicted RBP11.03□□□□□ -0.64
SYNE2-213ENST00000554805 CCAR2Q8N163 923 aaKnown RBP11.03□□□□□ -0.64
SYNE2-213ENST00000554805 STK11IPQ8N1F8 1099 aa11.03□□□□□ -0.64
SYNE2-213ENST00000554805 FEZ1Q99689 392 aa11.03□□□□□ -0.64
SYNE2-213ENST00000554805 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.03□□□□□ -0.64
SYNE2-213ENST00000554805 OGFRQ9NZT2 677 aa11.03□□□□□ -0.64
SYNE2-213ENST00000554805 AKAP2Q9Y2D5 859 aa11.03□□□□□ -0.64
SYNE2-213ENST00000554805 IDH1O75874 414 aaKnown RBP11.03□□□□□ -0.64
SYNE2-213ENST00000554805 SERPINC1P01008 464 aa11.03□□□□□ -0.64
SYNE2-213ENST00000554805 METTL24Q5JXM2 366 aa11.03□□□□□ -0.64
SYNE2-213ENST00000554805 FAM89AQ96GI7 184 aa11.03□□□□□ -0.64
SYNE2-213ENST00000554805 GPR108Q9NPR9 543 aa11.03□□□□□ -0.64
SYNE2-213ENST00000554805 TOMM22Q9NS69 142 aa11.03□□□□□ -0.64
SYNE2-213ENST00000554805 ANO1Q5XXA6 986 aa11.02□□□□□ -0.65
SYNE2-213ENST00000554805 CCDC191Q8NCU4 936 aa11.02□□□□□ -0.65
SYNE2-213ENST00000554805 FBXO18Q8NFZ0 1043 aa11.02□□□□□ -0.65
SYNE2-213ENST00000554805 GTPBP4Q9BZE4 634 aaKnown RBP11.02□□□□□ -0.65
SYNE2-213ENST00000554805 MARF1Q9Y4F3 1742 aaKnown RBP11.02□□□□□ -0.65
SYNE2-213ENST00000554805 PALLDQ8WX93 1383 aa11.02□□□□□ -0.65
SYNE2-213ENST00000554805 TRIM29Q14134 588 aa11.02□□□□□ -0.65
SYNE2-213ENST00000554805 ELF2Q15723 593 aa11.02□□□□□ -0.65
SYNE2-213ENST00000554805 ALG1Q9BT22 464 aa11.02□□□□□ -0.65
SYNE2-213ENST00000554805 LMO7Q8WWI1 1683 aa11.02□□□□□ -0.65
SYNE2-213ENST00000554805 COL22A1Q8NFW1 1626 aaPredicted RBP11.02□□□□□ -0.65
SYNE2-213ENST00000554805 ZFYP08048 801 aaPredicted RBP11.01□□□□□ -0.65
SYNE2-213ENST00000554805 SYKP43405 635 aa11.01□□□□□ -0.65
SYNE2-213ENST00000554805 CCZ1BP86790 482 aa11.01□□□□□ -0.65
SYNE2-213ENST00000554805 CCZ1P86791 482 aaPredicted RBP11.01□□□□□ -0.65
SYNE2-213ENST00000554805 IFIT5Q13325 482 aaKnown RBP11.01□□□□□ -0.65
SYNE2-213ENST00000554805 SYT10Q6XYQ8 523 aa11.01□□□□□ -0.65
SYNE2-213ENST00000554805 MICU3Q86XE3 530 aa11.01□□□□□ -0.65
SYNE2-213ENST00000554805 AIFM3Q96NN9 605 aa11.01□□□□□ -0.65
SYNE2-213ENST00000554805 A0A1W2PQ27 194 aa11.01□□□□□ -0.65
SYNE2-213ENST00000554805 A0A1W2PQ64 194 aa11.01□□□□□ -0.65
SYNE2-213ENST00000554805 A0A1W2PQD8 194 aa11.01□□□□□ -0.65
SYNE2-213ENST00000554805 GPAA1O43292 621 aa11.01□□□□□ -0.65
SYNE2-213ENST00000554805 SLU7O95391 586 aaKnown RBP11.01□□□□□ -0.65
SYNE2-213ENST00000554805 GPTP24298 496 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms