RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 ZNF646O15015 1829 aaPredicted RBP13.57□□□□□ -0.24
SRP54-205ENST00000554803 COL4A1P02462 1669 aa13.57□□□□□ -0.24
SRP54-205ENST00000554803 ZBTB7BO15156 539 aaPredicted RBP13.57□□□□□ -0.24
SRP54-205ENST00000554803 HOXB7P09629 217 aa13.57□□□□□ -0.24
SRP54-205ENST00000554803 DDIT3P35638 169 aa13.57□□□□□ -0.24
SRP54-205ENST00000554803 MFAP1P55081 439 aaKnown RBP13.57□□□□□ -0.24
SRP54-205ENST00000554803 DOK7Q18PE1 504 aa13.57□□□□□ -0.24
SRP54-205ENST00000554803 HDGFL1Q5TGJ6 251 aa13.57□□□□□ -0.24
SRP54-205ENST00000554803 EYA3Q99504 573 aa13.57□□□□□ -0.24
SRP54-205ENST00000554803 POLLQ9UGP5 575 aa13.57□□□□□ -0.24
SRP54-205ENST00000554803 BRPF3Q9ULD4 1205 aa13.57□□□□□ -0.24
SRP54-205ENST00000554803 NSFL1CQ9UNZ2 370 aaKnown RBP13.57□□□□□ -0.24
SRP54-205ENST00000554803 PTPN22Q9Y2R2 807 aa13.57□□□□□ -0.24
SRP54-205ENST00000554803 ERBB4Q15303 1308 aa13.57□□□□□ -0.24
SRP54-205ENST00000554803 C6orf229H3BNL8 230 aa13.56□□□□□ -0.24
SRP54-205ENST00000554803 ANXA1P04083 346 aa13.56□□□□□ -0.24
SRP54-205ENST00000554803 MKRN3Q13064 507 aaKnown RBP13.56□□□□□ -0.24
SRP54-205ENST00000554803 CLEC17AQ6ZS10 378 aa13.56□□□□□ -0.24
SRP54-205ENST00000554803 AGBL3Q8NEM8 1001 aa13.56□□□□□ -0.24
SRP54-205ENST00000554803 GOLGA6L22H0YM25 854 aa13.55□□□□□ -0.24
SRP54-205ENST00000554803 CDC45O75419 566 aa13.55□□□□□ -0.24
SRP54-205ENST00000554803 PROSER3Q2NL68 480 aa13.55□□□□□ -0.24
SRP54-205ENST00000554803 CCDC30Q5VVM6 783 aa13.55□□□□□ -0.24
SRP54-205ENST00000554803 G2E3Q7L622 706 aa13.55□□□□□ -0.24
SRP54-205ENST00000554803 LRP10Q7Z4F1 713 aa13.55□□□□□ -0.24
SRP54-205ENST00000554803 CHPF2Q9P2E5 772 aa13.55□□□□□ -0.24
SRP54-205ENST00000554803 H0YGN5 161 aa13.54□□□□□ -0.24
SRP54-205ENST00000554803 GPSM2P81274 684 aa13.54□□□□□ -0.24
SRP54-205ENST00000554803 TTLL12Q14166 644 aaPredicted RBP13.54□□□□□ -0.24
SRP54-205ENST00000554803 PRAMEF18Q5VWM3 479 aa13.54□□□□□ -0.24
SRP54-205ENST00000554803 RSBN1LQ6PCB5 846 aaPredicted RBP13.54□□□□□ -0.24
SRP54-205ENST00000554803 NLRP10Q86W26 655 aa13.54□□□□□ -0.24
SRP54-205ENST00000554803 RPAP2Q8IXW5 612 aaPredicted RBP13.54□□□□□ -0.24
SRP54-205ENST00000554803 ERO1AQ96HE7 468 aa13.54□□□□□ -0.24
SRP54-205ENST00000554803 MYOZ2Q9NPC6 264 aa13.54□□□□□ -0.24
SRP54-205ENST00000554803 SCAF8Q9UPN6 1271 aaKnown RBP13.54□□□□□ -0.24
SRP54-205ENST00000554803 PTPRCP08575 1304 aa13.54□□□□□ -0.24
SRP54-205ENST00000554803 TRAK2O60296 914 aa13.53□□□□□ -0.24
SRP54-205ENST00000554803 SLC4A2P04920 1241 aa13.53□□□□□ -0.24
SRP54-205ENST00000554803 NF2P35240 595 aa13.53□□□□□ -0.24
SRP54-205ENST00000554803 INHBEP58166 350 aa13.53□□□□□ -0.24
SRP54-205ENST00000554803 TCIRG1Q13488 830 aa13.53□□□□□ -0.24
SRP54-205ENST00000554803 SPRYD7Q5W111 196 aa13.53□□□□□ -0.24
SRP54-205ENST00000554803 CASC1Q6TDU7 716 aa13.53□□□□□ -0.24
SRP54-205ENST00000554803 CHRDL2Q6WN34 429 aa13.53□□□□□ -0.24
SRP54-205ENST00000554803 TBC1D16Q8TBP0 767 aa13.53□□□□□ -0.24
SRP54-205ENST00000554803 CELF1Q92879 486 aaKnown RBP13.53□□□□□ -0.24
SRP54-205ENST00000554803 GMLQ99445 158 aa13.53□□□□□ -0.24
SRP54-205ENST00000554803 TMEM106CQ9BVX2 250 aa13.53□□□□□ -0.24
SRP54-205ENST00000554803 TRMT112Q9UI30 125 aaKnown RBP13.53□□□□□ -0.24
SRP54-205ENST00000554803 SH3TC1Q8TE82 1336 aa13.53□□□□□ -0.24
SRP54-205ENST00000554803 PTPN12Q05209 780 aaKnown RBP13.52□□□□□ -0.25
SRP54-205ENST00000554803 PDIA6Q15084 440 aa13.52□□□□□ -0.25
SRP54-205ENST00000554803 RABEP1Q15276 862 aa13.52□□□□□ -0.25
SRP54-205ENST00000554803 HSP90AB3PQ58FF7 597 aa13.52□□□□□ -0.25
SRP54-205ENST00000554803 IFNL1Q8IU54 200 aa13.52□□□□□ -0.25
SRP54-205ENST00000554803 CD99L2Q8TCZ2 262 aa13.52□□□□□ -0.25
SRP54-205ENST00000554803 ZNF333Q96JL9 665 aa13.52□□□□□ -0.25
SRP54-205ENST00000554803 STK31Q9BXU1 1019 aa13.52□□□□□ -0.25
SRP54-205ENST00000554803 ZC3H12CQ9C0D7 883 aaKnown RBP13.52□□□□□ -0.25
SRP54-205ENST00000554803 PHAXQ9H814 394 aaKnown RBP13.52□□□□□ -0.25
SRP54-205ENST00000554803 ECM29Q5VYK3 1845 aa13.52□□□□□ -0.25
SRP54-205ENST00000554803 LAMA3Q16787 3333 aa13.52□□□□□ -0.25
SRP54-205ENST00000554803 MANSC4A6NHS7 340 aaPredicted RBP13.51□□□□□ -0.25
SRP54-205ENST00000554803 K7ELQ4 463 aaPredicted RBP13.51□□□□□ -0.25
SRP54-205ENST00000554803 USP17L8P0C7I0 530 aa13.51□□□□□ -0.25
SRP54-205ENST00000554803 MNX1P50219 401 aaPredicted RBP13.51□□□□□ -0.25
SRP54-205ENST00000554803 RAB3GAP1Q15042 981 aa13.51□□□□□ -0.25
SRP54-205ENST00000554803 LDLRAD1Q5T700 205 aa13.51□□□□□ -0.25
SRP54-205ENST00000554803 EFCC1Q9HA90 598 aa13.51□□□□□ -0.25
SRP54-205ENST00000554803 RBM27Q9P2N5 1060 aaKnown RBP13.51□□□□□ -0.25
SRP54-205ENST00000554803 SF3B3Q15393 1217 aaKnown RBP13.5□□□□□ -0.25
SRP54-205ENST00000554803 ARMC9Q7Z3E5 817 aa13.5□□□□□ -0.25
SRP54-205ENST00000554803 LNPKQ9C0E8 428 aa13.5□□□□□ -0.25
SRP54-205ENST00000554803 PODXL2Q9NZ53 605 aa13.5□□□□□ -0.25
SRP54-205ENST00000554803 DBF4Q9UBU7 674 aaPredicted RBP13.5□□□□□ -0.25
SRP54-205ENST00000554803 G3V3G9 751 aa13.49□□□□□ -0.25
SRP54-205ENST00000554803 IGF2BP3O00425 579 aaKnown RBP eCLIP13.49□□□□□ -0.25
SRP54-205ENST00000554803 EPB41L2O43491 1005 aaKnown RBP13.49□□□□□ -0.25
SRP54-205ENST00000554803 NUCB2P80303 420 aa13.49□□□□□ -0.25
SRP54-205ENST00000554803 FLIIQ13045 1269 aa13.49□□□□□ -0.25
SRP54-205ENST00000554803 NBPF9Q3BBW0 867 aa13.49□□□□□ -0.25
SRP54-205ENST00000554803 DCAF8Q5TAQ9 597 aa13.49□□□□□ -0.25
SRP54-205ENST00000554803 ANKRD45Q5TZF3 282 aa13.49□□□□□ -0.25
SRP54-205ENST00000554803 DCTPP1Q9H773 170 aa13.49□□□□□ -0.25
SRP54-205ENST00000554803 CWC22Q9HCG8 908 aaKnown RBP13.49□□□□□ -0.25
SRP54-205ENST00000554803 HMMRO75330 724 aa13.48□□□□□ -0.25
SRP54-205ENST00000554803 ZBTB48P10074 688 aaPredicted RBP13.48□□□□□ -0.25
SRP54-205ENST00000554803 CAP1Q01518 475 aa13.48□□□□□ -0.25
SRP54-205ENST00000554803 UNC80Q8N2C7 3258 aa13.48□□□□□ -0.25
SRP54-205ENST00000554803 F6X3S4 739 aa13.47□□□□□ -0.25
SRP54-205ENST00000554803 HSP90AA1P07900 732 aaKnown RBP13.47□□□□□ -0.25
SRP54-205ENST00000554803 SP3Q02447 781 aa13.47□□□□□ -0.25
SRP54-205ENST00000554803 PRKG1Q13976 671 aa13.47□□□□□ -0.25
SRP54-205ENST00000554803 NBPF11Q86T75 865 aa13.47□□□□□ -0.25
SRP54-205ENST00000554803 ANKRD44Q8N8A2 993 aa13.47□□□□□ -0.25
SRP54-205ENST00000554803 CHMP4AQ9BY43 222 aa13.47□□□□□ -0.25
SRP54-205ENST00000554803 PRO3102Q9H379 93 aa13.47□□□□□ -0.25
SRP54-205ENST00000554803 OTOFQ9HC10 1997 aa13.47□□□□□ -0.25
SRP54-205ENST00000554803 ZSWIM8A7E2V4 1837 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms