RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 DIAPH3Q9NSV4 1193 aa17.4■□□□□ 0.38
SHOX2-206ENST00000554685 ZFYP08048 801 aaPredicted RBP17.39■□□□□ 0.37
SHOX2-206ENST00000554685 IL1R1P14778 569 aa17.39■□□□□ 0.37
SHOX2-206ENST00000554685 ZSCAN25Q6NSZ9 544 aa17.39■□□□□ 0.37
SHOX2-206ENST00000554685 TBC1D9Q6ZT07 1266 aa17.39■□□□□ 0.37
SHOX2-206ENST00000554685 TXNRD3Q86VQ6 643 aa17.39■□□□□ 0.37
SHOX2-206ENST00000554685 ZGPATQ8N5A5 531 aaKnown RBP17.39■□□□□ 0.37
SHOX2-206ENST00000554685 NLGN2Q8NFZ4 835 aa17.39■□□□□ 0.37
SHOX2-206ENST00000554685 TDRD7Q8NHU6 1098 aaKnown RBP17.39■□□□□ 0.37
SHOX2-206ENST00000554685 BACH2Q9BYV9 841 aa17.39■□□□□ 0.37
SHOX2-206ENST00000554685 CD209Q9NNX6 404 aa17.39■□□□□ 0.37
SHOX2-206ENST00000554685 SNRKQ9NRH2 765 aa17.39■□□□□ 0.37
SHOX2-206ENST00000554685 BCS1LQ9Y276 419 aa17.39■□□□□ 0.37
SHOX2-206ENST00000554685 CHMLP26374 656 aa17.38■□□□□ 0.37
SHOX2-206ENST00000554685 TMED8Q6PL24 325 aaPredicted RBP17.38■□□□□ 0.37
SHOX2-206ENST00000554685 WDR66Q8TBY9 1149 aa17.38■□□□□ 0.37
SHOX2-206ENST00000554685 GPR101Q96P66 508 aaPredicted RBP17.38■□□□□ 0.37
SHOX2-206ENST00000554685 RNF39Q9H2S5 420 aa17.38■□□□□ 0.37
SHOX2-206ENST00000554685 U3KPZ7 1027 aaPredicted RBP17.38■□□□□ 0.37
SHOX2-206ENST00000554685 BRCA1P38398 1863 aaKnown RBP17.37■□□□□ 0.37
SHOX2-206ENST00000554685 RIMBP2O15034 1052 aa17.37■□□□□ 0.37
SHOX2-206ENST00000554685 CYP2E1P05181 493 aaPredicted RBP17.37■□□□□ 0.37
SHOX2-206ENST00000554685 KIAA2012Q0VF49 1180 aa17.37■□□□□ 0.37
SHOX2-206ENST00000554685 MAP3K12Q12852 859 aa17.37■□□□□ 0.37
SHOX2-206ENST00000554685 PI16Q6UXB8 463 aa17.37■□□□□ 0.37
SHOX2-206ENST00000554685 SPTY2D1Q68D10 685 aaPredicted RBP17.36■□□□□ 0.37
SHOX2-206ENST00000554685 PODNQ7Z5L7 613 aa17.36■□□□□ 0.37
SHOX2-206ENST00000554685 EDC3Q96F86 508 aaKnown RBP17.36■□□□□ 0.37
SHOX2-206ENST00000554685 UPF2Q9HAU5 1272 aaKnown RBP17.36■□□□□ 0.37
SHOX2-206ENST00000554685 IQSEC3Q9UPP2 1182 aaPredicted RBP17.36■□□□□ 0.37
SHOX2-206ENST00000554685 NDUFB9Q9Y6M9 179 aa17.36■□□□□ 0.37
SHOX2-206ENST00000554685 RAD50Q92878 1312 aa17.36■□□□□ 0.37
SHOX2-206ENST00000554685 PPIP5K2O43314 1243 aa17.35■□□□□ 0.37
SHOX2-206ENST00000554685 CHAF1AQ13111 956 aaPredicted RBP17.35■□□□□ 0.37
SHOX2-206ENST00000554685 TBC1D22AQ8WUA7 517 aa17.35■□□□□ 0.37
SHOX2-206ENST00000554685 SYT17Q9BSW7 474 aa17.35■□□□□ 0.37
SHOX2-206ENST00000554685 TAOK3Q9H2K8 898 aa17.35■□□□□ 0.37
SHOX2-206ENST00000554685 ANTXR1Q9H6X2 564 aa17.35■□□□□ 0.37
SHOX2-206ENST00000554685 LRP2BPQ9P2M1 347 aa17.35■□□□□ 0.37
SHOX2-206ENST00000554685 LTBP3Q9NS15 1303 aa17.35■□□□□ 0.37
SHOX2-206ENST00000554685 SALL1Q9NSC2 1324 aa17.35■□□□□ 0.37
SHOX2-206ENST00000554685 AK9Q5TCS8 1911 aa17.35■□□□□ 0.37
SHOX2-206ENST00000554685 RNF113AO15541 343 aaKnown RBP17.34■□□□□ 0.37
SHOX2-206ENST00000554685 REC8O95072 547 aa17.34■□□□□ 0.37
SHOX2-206ENST00000554685 FAM205AQ6ZU69 1335 aa17.34■□□□□ 0.37
SHOX2-206ENST00000554685 PIH1D3Q9NQM4 214 aaKnown RBP17.34■□□□□ 0.37
SHOX2-206ENST00000554685 AKAP11Q9UKA4 1901 aa17.33■□□□□ 0.37
SHOX2-206ENST00000554685 COL1A1P02452 1464 aaPredicted RBP17.33■□□□□ 0.37
SHOX2-206ENST00000554685 IDH1O75874 414 aaKnown RBP17.33■□□□□ 0.36
SHOX2-206ENST00000554685 AOC3Q16853 763 aa17.33■□□□□ 0.36
SHOX2-206ENST00000554685 ERICH6Q7L0X2 663 aa17.33■□□□□ 0.36
SHOX2-206ENST00000554685 ESYT1Q9BSJ8 1104 aa17.33■□□□□ 0.36
SHOX2-206ENST00000554685 ABCF2Q9UG63 623 aa17.33■□□□□ 0.36
SHOX2-206ENST00000554685 ECE2O60344 883 aa17.32■□□□□ 0.36
SHOX2-206ENST00000554685 MFAP1P55081 439 aaKnown RBP17.32■□□□□ 0.36
SHOX2-206ENST00000554685 UBE3CQ15386 1083 aa17.32■□□□□ 0.36
SHOX2-206ENST00000554685 DOK7Q18PE1 504 aa17.32■□□□□ 0.36
SHOX2-206ENST00000554685 LARGE2Q8N3Y3 721 aa17.32■□□□□ 0.36
SHOX2-206ENST00000554685 HELLSQ9NRZ9 838 aa17.32■□□□□ 0.36
SHOX2-206ENST00000554685 WWC3Q9ULE0 1092 aa17.32■□□□□ 0.36
SHOX2-206ENST00000554685 ARFGEF1Q9Y6D6 1849 aa17.31■□□□□ 0.36
SHOX2-206ENST00000554685 SGSM2O43147 1006 aa17.31■□□□□ 0.36
SHOX2-206ENST00000554685 EPB41L2O43491 1005 aaKnown RBP17.31■□□□□ 0.36
SHOX2-206ENST00000554685 ADD2P35612 726 aa17.31■□□□□ 0.36
SHOX2-206ENST00000554685 IARSP41252 1262 aaKnown RBP17.31■□□□□ 0.36
SHOX2-206ENST00000554685 SLC9C2Q5TAH2 1124 aa17.31■□□□□ 0.36
SHOX2-206ENST00000554685 CWC27Q6UX04 472 aaKnown RBP17.31■□□□□ 0.36
SHOX2-206ENST00000554685 APPBP2Q92624 585 aa17.31■□□□□ 0.36
SHOX2-206ENST00000554685 RAI14Q9P0K7 980 aa17.31■□□□□ 0.36
SHOX2-206ENST00000554685 SUGT1Q9Y2Z0 365 aa17.31■□□□□ 0.36
SHOX2-206ENST00000554685 MYH13Q9UKX3 1938 aa17.3■□□□□ 0.36
SHOX2-206ENST00000554685 LDHBP07195 334 aaKnown RBP17.3■□□□□ 0.36
SHOX2-206ENST00000554685 PDE6AP16499 860 aa17.3■□□□□ 0.36
SHOX2-206ENST00000554685 FKBP1AP62942 108 aaKnown RBP17.3■□□□□ 0.36
SHOX2-206ENST00000554685 NMIQ13287 307 aaPredicted RBP17.3■□□□□ 0.36
SHOX2-206ENST00000554685 MCMDC2Q4G0Z9 681 aa17.3■□□□□ 0.36
SHOX2-206ENST00000554685 ZMYM1Q5SVZ6 1142 aa17.3■□□□□ 0.36
SHOX2-206ENST00000554685 KIAA1211Q6ZU35 1233 aa17.3■□□□□ 0.36
SHOX2-206ENST00000554685 NIM1KQ8IY84 436 aa17.3■□□□□ 0.36
SHOX2-206ENST00000554685 DBNDD1Q9H9R9 158 aa17.3■□□□□ 0.36
SHOX2-206ENST00000554685 ZNF277Q9NRM2 450 aaPredicted RBP17.3■□□□□ 0.36
SHOX2-206ENST00000554685 NFKBIEO00221 500 aa17.29■□□□□ 0.36
SHOX2-206ENST00000554685 MYCNP04198 464 aaPredicted RBP17.29■□□□□ 0.36
SHOX2-206ENST00000554685 GTF2IP78347 998 aa17.29■□□□□ 0.36
SHOX2-206ENST00000554685 GSTO1P78417 241 aa17.29■□□□□ 0.36
SHOX2-206ENST00000554685 STRIP1Q5VSL9 837 aa17.29■□□□□ 0.36
SHOX2-206ENST00000554685 TTLL5Q6EMB2 1281 aa17.29■□□□□ 0.36
SHOX2-206ENST00000554685 DZIP1Q86YF9 867 aaKnown RBP17.29■□□□□ 0.36
SHOX2-206ENST00000554685 SLF2Q8IX21 1173 aa17.29■□□□□ 0.36
SHOX2-206ENST00000554685 JDP2Q8WYK2 163 aa17.29■□□□□ 0.36
SHOX2-206ENST00000554685 DOCK2Q92608 1830 aa17.28■□□□□ 0.36
SHOX2-206ENST00000554685 MAST3O60307 1309 aa17.28■□□□□ 0.36
SHOX2-206ENST00000554685 A0A0D9SFI3 127 aa17.28■□□□□ 0.36
SHOX2-206ENST00000554685 USP17L3A6NCW0 530 aa17.28■□□□□ 0.36
SHOX2-206ENST00000554685 USP17L4A6NCW7 530 aa17.28■□□□□ 0.36
SHOX2-206ENST00000554685 MFSD14BQ5SR56 506 aa17.28■□□□□ 0.36
SHOX2-206ENST00000554685 NAA16Q6N069 864 aaPredicted RBP17.28■□□□□ 0.36
SHOX2-206ENST00000554685 USP17L1Q7RTZ2 530 aa17.28■□□□□ 0.36
SHOX2-206ENST00000554685 MAGEB6Q8N7X4 407 aa17.28■□□□□ 0.36
SHOX2-206ENST00000554685 FBXW7Q969H0 707 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms